Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.3e-82 308.9 163 100.0
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.3e-61 240.0 163 83.4
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.2e-61 239.2 163 82.2
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.9e-60 236.1 163 80.4
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 2.1e-59 232.6 163 79.8
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 3.5e-46 188.7 158 67.1
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 1.3e-40 170.2 163 57.7
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.7e-40 169.9 162 58.0
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 4.1e-39 165.2 192 52.6
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 7.0e-39 164.5 163 55.8
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 7.0e-39 164.5 159 56.6
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 7.0e-39 164.5 162 56.2
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 7.0e-39 164.5 162 56.2
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 9.1e-39 164.1 152 56.6
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 1.2e-38 163.7 153 58.2
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 1.6e-38 163.3 167 54.5
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 1.6e-38 163.3 152 58.6
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.0e-38 162.9 162 56.2
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.0e-38 162.9 157 55.4
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 4.5e-38 161.8 152 55.9
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 5.9e-38 161.4 158 56.3
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 7.7e-38 161.0 162 55.6
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 1.3e-37 160.2 160 55.0
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 5.0e-37 158.3 154 54.5
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 6.5e-37 157.9 140 61.4
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 8.5e-37 157.5 159 55.3
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 1.1e-36 157.1 154 54.5
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 1.5e-36 156.8 164 51.2
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 1.5e-36 156.8 161 53.4
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 3.2e-36 155.6 154 53.9
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.2e-36 155.6 159 52.8
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.2e-36 155.6 194 52.1
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 5.5e-36 154.8 156 55.1
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 7.2e-36 154.5 157 54.8
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 1.2e-35 153.7 159 55.3
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-35 153.3 157 52.2
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 1.6e-35 153.3 157 52.2
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 1.6e-35 153.3 159 54.1
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 2.7e-35 152.5 153 54.2
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 2.7e-35 152.5 202 50.0
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 1.4e-34 150.2 159 50.9
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.4e-34 150.2 157 52.9
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 1.8e-34 149.8 154 52.6
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 2.3e-34 149.4 159 50.3
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 2.3e-34 149.4 155 52.9
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 5.2e-34 148.3 156 52.6
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 6.8e-34 147.9 162 49.4
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 1.2e-33 147.1 157 53.5
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 1.5e-33 146.7 163 49.1
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 2.6e-33 146.0 162 48.1
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 3.4e-33 145.6 154 51.9
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 3.4e-33 145.6 156 50.6
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 4.4e-33 145.2 156 51.3
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 4.4e-33 145.2 156 51.3
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 5.7e-33 144.8 156 51.9
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 9.8e-33 144.1 156 49.4
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 9.8e-33 144.1 156 49.4
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 9.8e-33 144.1 159 49.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 1.7e-32 143.3 154 51.9
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 1.7e-32 143.3 156 49.4
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 1.7e-32 143.3 156 49.4
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 3.7e-32 142.1 155 52.9
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 4.8e-32 141.7 156 50.6
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 4.8e-32 141.7 154 50.6
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 6.3e-32 141.4 155 49.0
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.8e-31 139.8 156 48.7
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 2.4e-31 139.4 153 49.0
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 3.1e-31 139.0 152 52.6
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 3.1e-31 139.0 141 55.3
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 4.1e-31 138.7 157 48.4
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 9.1e-31 137.5 154 50.6
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 9.1e-31 137.5 156 50.6
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 1.6e-30 136.7 156 49.4
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 1.6e-30 136.7 154 51.3
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 2.7e-30 136.0 184 44.0
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 7.7e-30 134.4 158 49.4
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 7.7e-30 134.4 156 48.7
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 1.3e-29 133.7 143 53.1
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 1.3e-29 133.7 154 50.6
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.3e-29 133.7 156 45.5
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 2.9e-29 132.5 139 54.0
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 5.0e-29 131.7 151 51.7
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 5.0e-29 131.7 108 65.7
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 1.1e-28 130.6 155 46.5
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.1e-28 130.6 139 51.8
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 1.1e-28 130.6 157 48.4
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 1.1e-28 130.6 154 48.1
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 1.5e-28 130.2 157 48.4
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 2.5e-28 129.4 163 46.0
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 2.5e-28 129.4 139 51.1
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 1.2e-27 127.1 111 58.6
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 1.6e-27 126.7 139 51.1
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 2.1e-27 126.3 155 46.5
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 2.8e-27 125.9 99 62.6
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 6.1e-27 124.8 133 50.4
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 6.1e-27 124.8 164 46.3
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 6.1e-27 124.8 139 53.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 1.8e-26 123.2 156 45.5
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 1.8e-26 123.2 156 43.6
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 2.3e-26 122.9 150 45.3
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 2.3e-26 122.9 150 45.3
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 4.0e-26 122.1 112 58.0
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 6.8e-26 121.3 138 48.6
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 8.9e-26 120.9 158 45.6
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 1.2e-25 120.6 155 43.9
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 1.5e-25 120.2 155 45.2
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 1.5e-25 120.2 144 48.6
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 1.5e-25 120.2 160 42.5
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 4.4e-25 118.6 139 47.5
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 4.4e-25 118.6 139 48.9
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 5.7e-25 118.2 95 64.2
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 5.7e-25 118.2 136 47.1
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 1.3e-24 117.1 159 40.9
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 1.3e-24 117.1 159 40.9
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 2.2e-24 116.3 98 61.2
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 6.3e-24 114.8 160 41.2
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 1.8e-23 113.2 156 42.9
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 7.0e-23 111.3 151 45.7
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 9.2e-23 110.9 139 48.9
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 9.2e-23 110.9 138 47.8
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 3.5e-22 109.0 134 47.8
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 7.8e-22 107.8 98 56.1
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 1.3e-21 107.1 111 47.7
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 5.0e-21 105.1 110 49.1
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 1.5e-20 103.6 156 41.0
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 4.3e-20 102.1 164 42.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 2.8e-19 99.4 153 43.1
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 6.1e-19 98.2 135 43.7
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 6.1e-19 98.2 159 39.6
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 3.1e-18 95.9 115 46.1
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 4.9e-16 88.6 108 41.7
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 4.1e-15 85.5 157 36.3
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.0e-14 83.2 162 37.7
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 1.3e-13 80.5 159 36.5
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.3e-13 80.5 72 58.3
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 3.4e-09 65.9 155 31.6
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 7.5e-09 64.7 45 77.8
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 9.8e-09 64.3 74 54.1
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 2.2e-08 63.2 45 73.3
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 2.2e-08 63.2 41 82.9
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 2.9e-08 62.8 45 75.6
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 4.9e-08 62.0 45 73.3
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 6.4e-08 61.6 45 71.1
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.4e-07 60.5 43 76.7
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 2.4e-07 59.7 100 38.0
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 4.6e-06 55.5 45 68.9
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 4.6e-06 55.5 45 68.9
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 6.0e-06 55.1 43 69.8


User provided reference genes

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