Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 6.5e-90 335.9 239 100.0
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 6.5e-50 203.0 239 77.4
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 8.0e-40 169.5 239 71.1
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.4e-39 168.7 262 67.9
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.8e-39 168.3 239 73.2
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 5.7e-38 163.3 175 54.9
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 5.9e-35 153.3 259 64.9
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.2e-32 145.6 243 70.0
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 4.7e-32 143.7 257 61.1
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 6.2e-32 143.3 252 63.1
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 4.0e-31 140.6 150 53.3
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 7.5e-30 136.3 162 50.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 7.5e-30 136.3 262 58.4
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 2.2e-29 134.8 173 48.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 2.9e-29 134.4 175 49.1
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 8.3e-29 132.9 172 48.8
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.1e-28 132.5 278 60.4
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 1.4e-28 132.1 262 59.2
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.9e-28 131.7 255 60.8
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.2e-27 129.0 173 47.4
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 2.0e-27 128.3 161 51.6
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 4.6e-27 127.1 282 58.2
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 4.6e-27 127.1 282 58.2
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 6.0e-27 126.7 163 49.7
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 6.0e-27 126.7 163 49.7
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 7.8e-27 126.3 163 49.7
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 1.7e-26 125.2 153 49.0
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 6.6e-26 123.2 173 47.4
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 8.6e-26 122.9 156 50.0
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 1.9e-25 121.7 243 59.7
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 1.9e-25 121.7 145 51.7
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.9e-25 121.7 159 47.2
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 2.5e-25 121.3 246 62.2
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 3.3e-25 120.9 183 43.7
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 5.6e-25 120.2 157 50.3
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.2e-24 119.0 157 45.9
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 1.2e-24 119.0 146 87.0
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 1.6e-24 118.6 258 61.6
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 2.8e-24 117.9 257 59.1
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.8e-24 117.9 159 47.2
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 4.7e-24 117.1 247 61.5
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 6.2e-24 116.7 161 46.6
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 8.1e-24 116.3 267 51.3
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 1.8e-23 115.2 241 62.7
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.3e-23 114.8 152 49.3
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 5.2e-23 113.6 244 60.7
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 6.8e-23 113.2 176 42.6
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.5e-22 112.1 114 56.1
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 2.0e-22 111.7 173 43.4
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 4.4e-22 110.5 156 44.2
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 7.5e-22 109.8 152 45.4
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 9.9e-22 109.4 150 44.7
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 1.7e-21 108.6 249 61.0
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 2.2e-21 108.2 190 72.1
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 2.2e-21 108.2 252 60.7
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 2.2e-21 108.2 169 43.2
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 3.7e-21 107.5 155 43.2
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 4.9e-21 107.1 153 45.1
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.9e-21 107.1 181 42.5
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 6.4e-21 106.7 153 43.8
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 8.3e-21 106.3 154 42.9
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 1.9e-20 105.1 241 62.2
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 2.4e-20 104.8 263 55.1
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 2.4e-20 104.8 157 41.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 1.2e-19 102.4 249 56.2
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 2.1e-19 101.7 247 56.7
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 1.7e-18 98.6 243 60.1
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 1.7e-18 98.6 261 57.1
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 2.3e-18 98.2 160 43.8
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.0e-18 97.8 160 44.4
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 3.9e-18 97.4 143 82.5
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 3.9e-18 97.4 245 60.0
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 5.1e-18 97.1 153 42.5
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 8.6e-18 96.3 253 58.1
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 8.6e-18 96.3 155 43.9
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 8.6e-18 96.3 245 59.6
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 1.5e-17 95.5 156 41.7
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 5.6e-17 93.6 102 53.9
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 7.3e-17 93.2 102 53.9
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.2e-16 92.4 109 52.3
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 4.7e-16 90.5 168 39.9
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 8.1e-16 89.7 131 90.8
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.1e-15 89.4 177 50.8
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.4e-15 88.2 165 40.0
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 3.1e-15 87.8 185 70.8
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 8.9e-15 86.3 157 73.2
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 3.4e-14 84.3 158 38.0
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.4e-14 84.0 165 38.8
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.2e-13 81.6 155 34.8
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 3.8e-13 80.9 160 38.8
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 8.4e-13 79.7 117 41.9
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 3.2e-12 77.8 158 36.7
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 4.1e-12 77.4 157 39.5
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 9.2e-12 76.3 110 49.1
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 4.6e-11 73.9 155 38.7
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.3e-10 71.6 110 40.0
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 2.3e-10 71.6 110 40.0
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 2.3e-10 71.6 104 44.2
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 3.0e-10 71.2 108 43.5
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 3.9e-10 70.9 99 43.4
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.9e-10 70.9 107 43.0
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.9e-10 70.9 108 43.5
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 2.5e-09 68.2 125 37.6
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 3.3e-09 67.8 106 41.5
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 3.6e-08 64.3 107 39.3
TPR.G12357 Trifolium pratense HOM05D006739 ORTHO05D008402 9.0e-07 59.7 133 31.6
Cpa.g.sc177.11 Carica papaya HOM05D006739 ORTHO05D008402 1.5e-06 58.9 135 36.3
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 2.6e-06 58.2 48 52.1


User provided reference genes

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