Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M02028 Erythranthe guttata HOM05D005725 ORTHO05D007531 1.3e-276 955.7 470 100.0
MSTRG.16376 Avicennia marina HOM05D005725 ORTHO05D007531 8.1e-181 637.5 476 66.2
SalBow8G4963 Salvia bowleyana HOM05D005725 ORTHO05D007531 1.3e-149 533.9 500 54.8
Dinv17876 Davidia involucrata HOM05D005725 ORTHO05D007531 9.1e-124 448.0 521 47.2
GSVIVG01010083001 Vitis vinifera HOM05D005725 ORTHO05D007531 1.1e-113 414.5 508 45.1
Cc09_g04730 Coffea canephora HOM05D005725 ORTHO05D007531 4.0e-111 406.0 515 43.9
Potri.001G075300 Populus trichocarpa HOM05D005725 ORTHO05D007531 7.5e-110 401.7 514 43.8
CiPaw.10G107600 Carya illinoinensis HOM05D005725 ORTHO05D007531 3.7e-109 399.4 533 42.2
Sopen01g016500 Solanum pennellii HOM05D005725 ORTHO05D007531 1.4e-108 397.5 501 45.7
Solyc01g021640.3 Solanum lycopersicum HOM05D005725 ORTHO05D007531 3.1e-108 396.4 501 45.3
Prupe.4G119800 Prunus persica HOM05D005725 ORTHO05D007531 1.6e-107 394.0 511 42.7
RcHm_v2.0_Chr5g0021701 Rosa chinensis HOM05D005725 ORTHO05D007531 8.6e-106 388.3 506 42.5
FvH4_3g13240 Fragaria vesca HOM05D005725 ORTHO05D007531 1.5e-105 387.5 509 42.8
MD05G1243800 Malus domestica HOM05D005725 ORTHO05D007531 4.3e-105 386.0 517 42.2
Glyma.15G155900 Glycine max HOM05D005725 ORTHO05D007531 9.5e-105 384.8 512 44.5
Manes.03G071900 Manihot esculenta HOM05D005725 ORTHO05D007531 1.2e-104 384.4 513 42.1
TWI38G1126 Tripterygium wilfordii HOM05D005725 ORTHO05D007531 2.8e-104 383.3 501 42.9
Nn7g38404 Nelumbo nucifera HOM05D005725 ORTHO05D007531 8.0e-104 381.7 516 43.4
Peaxi162Scf00378g00520 Petunia axillaris HOM05D005725 ORTHO05D007531 1.0e-103 381.3 501 45.5
Glyma.09G048600 Glycine max HOM05D005725 ORTHO05D007531 4.0e-103 379.4 512 44.3
Lalb_Chr18g0051971 Lupinus albus HOM05D005725 ORTHO05D007531 5.8e-102 375.6 508 43.3
Lj6g0004794 Lotus japonicus HOM05D005725 ORTHO05D007531 9.8e-102 374.8 513 43.7
Thecc.02G002000 Theobroma cacao HOM05D005725 ORTHO05D007531 2.9e-101 373.2 510 43.9
VMungo1309G0521 Vigna mungo HOM05D005725 ORTHO05D007531 6.4e-101 372.1 507 44.0
ECA232G4493 Erigeron canadensis HOM05D005725 ORTHO05D007531 8.3e-101 371.7 508 43.1
HanXRQChr09g0257851 Helianthus annuus HOM05D005725 ORTHO05D007531 1.9e-100 370.5 523 41.5
DCAR_001262 Daucus carota HOM05D005725 ORTHO05D007531 9.2e-100 368.2 522 42.7
Aqoxy1G01377 Aquilegia oxysepala HOM05D005725 ORTHO05D007531 6.0e-99 365.5 517 42.0
Phvul.009G244300 Phaseolus vulgaris HOM05D005725 ORTHO05D007531 2.3e-98 363.6 506 43.1
COL.COLO4_25036 Corchorus olitorius HOM05D005725 ORTHO05D007531 6.6e-98 362.1 512 42.0
Medtr2g437810 Medicago truncatula HOM05D005725 ORTHO05D007531 8.6e-98 361.7 511 41.9
CANSAT54G1139 Cannabis sativa HOM05D005725 ORTHO05D007531 1.5e-97 360.9 515 41.2
Psat1g151080 Pisum sativum HOM05D005725 ORTHO05D007531 1.5e-97 360.9 509 41.7
TPR.G30931 Trifolium pratense HOM05D005725 ORTHO05D007531 5.2e-95 352.4 506 42.3
Duzib132G0485 Durio zibethinus HOM05D005725 ORTHO05D007531 5.8e-94 349.0 507 40.4
Gohir.A11G047200 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.7e-93 347.4 512 42.4
Cfa001153 Carpinus fangiana HOM05D005725 ORTHO05D007531 2.2e-93 347.1 453 41.9
MELO3C007000.2 Cucumis melo HOM05D005725 ORTHO05D007531 8.3e-93 345.1 510 39.4
Gorai.007G055200 Gossypium raimondii HOM05D005725 ORTHO05D007531 8.3e-93 345.1 513 42.7
FAN21G2681 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.1e-92 344.7 473 41.9
FAN11G2553 Fragaria x ananassa HOM05D005725 ORTHO05D007531 2.4e-92 343.6 499 40.3
Gohir.D11G050800 Gossypium hirsutum HOM05D005725 ORTHO05D007531 1.2e-91 341.3 513 42.3
arahy.Tifrunner.gnm1.ann1.2M6VYA Arachis hypogaea HOM05D005725 ORTHO05D007531 7.8e-91 338.6 517 40.4
AUR62003571 Chenopodium quinoa HOM05D005725 ORTHO05D007531 2.3e-90 337.0 501 40.5
Eucgr.D00006 Eucalyptus grandis HOM05D005725 ORTHO05D007531 1.5e-89 334.3 511 38.9
Sabra01G0053700 Salix brachista HOM05D005725 ORTHO05D007531 4.7e-88 329.3 646 34.4
Ah.03g147910 Amaranthus hybridus HOM05D005725 ORTHO05D007531 1.4e-87 327.8 508 39.0
FAN16G0048 Fragaria x ananassa HOM05D005725 ORTHO05D007531 3.1e-87 326.6 465 40.6
AL6G28440 Arabidopsis lyrata HOM05D005725 ORTHO05D007531 1.5e-86 324.3 500 39.2
Carub.0006s1558 Capsella rubella HOM05D005725 ORTHO05D007531 3.4e-86 323.2 501 39.5
FAN25G0714 Fragaria x ananassa HOM05D005725 ORTHO05D007531 1.3e-85 321.2 438 42.7
Os07g0108000 Oryza sativa ssp. japonica HOM05D005725 ORTHO05D007531 2.9e-85 320.1 507 36.7
PGR004G2791 Punica granatum HOM05D005725 ORTHO05D007531 7.1e-84 315.5 511 39.3
Atru.chr10.248 Acer truncatum HOM05D005725 ORTHO05D007531 1.7e-82 310.8 508 37.2
BcaC03g18554 Brassica carinata HOM05D005725 ORTHO05D007531 3.0e-82 310.1 519 37.6
AT5G17370 Arabidopsis thaliana HOM05D005725 ORTHO05D007531 8.6e-82 308.5 528 36.7
Thhalv10015915m.g Eutrema salsugineum HOM05D005725 ORTHO05D007531 1.5e-81 307.8 507 38.3
PSO541G5061 Papaver somniferum HOM05D005725 ORTHO05D007531 1.5e-81 307.8 456 42.3
BolC2t06810H Brassica oleracea HOM05D005725 ORTHO05D007531 4.3e-81 306.2 514 37.4
ClCG01G025890 Citrullus lanatus HOM05D005725 ORTHO05D007531 7.3e-81 305.4 485 38.1
Zm00001eb298410 Zea mays HOM05D005725 ORTHO05D007531 7.3e-81 305.4 503 38.2
C02p09010 Brassica napus HOM05D005725 ORTHO05D007531 2.8e-80 303.5 513 37.2
BraA02t05379Z Brassica rapa HOM05D005725 ORTHO05D007531 3.6e-80 303.1 519 37.2
Sp6g26850 Schrenkiella parvula HOM05D005725 ORTHO05D007531 6.2e-80 302.4 509 36.7
CARHR195840 Cardamine hirsuta HOM05D005725 ORTHO05D007531 8.1e-80 302.0 510 37.3
A02p04160 Brassica napus HOM05D005725 ORTHO05D007531 1.8e-79 300.8 516 37.0
ATR0794G001 Amborella trichopoda HOM05D005725 ORTHO05D007531 4.4e-78 296.2 519 36.6
Hund26771 Selenicereus undatus HOM05D005725 ORTHO05D007531 9.9e-78 295.0 459 38.8
BcaB05g23263 Brassica carinata HOM05D005725 ORTHO05D007531 4.9e-77 292.7 510 36.9
AUR62017886 Chenopodium quinoa HOM05D005725 ORTHO05D007531 6.4e-77 292.4 474 39.2
HPP92_000831 Vanilla planifolia HOM05D005725 ORTHO05D007531 1.2e-75 288.1 525 35.6
vmacro03566 Vaccinium macrocarpon HOM05D005725 ORTHO05D007531 1.6e-75 287.7 651 32.1
CsaV3_6G053120 Cucumis sativus L. HOM05D005725 ORTHO05D007531 1.3e-74 284.6 418 39.7
TAR626G0027 Trochodendron aralioides HOM05D005725 ORTHO05D007531 1.1e-73 281.6 362 44.5
Ca_02400_v3 Cicer arietinum L. HOM05D005725 ORTHO05D007531 1.5e-73 281.2 512 37.9
Aa31LG11G12260 Aethionema arabicum HOM05D005725 ORTHO05D007531 9.6e-73 278.5 521 34.9
Nitab4.5_0000253g0020 Nicotiana tabacum HOM05D005725 ORTHO05D007531 1.6e-72 277.7 362 44.2
Nitab4.5_0001484g0010 Nicotiana tabacum HOM05D005725 ORTHO05D007531 3.6e-72 276.6 362 44.8
arahy.Tifrunner.gnm1.ann1.GBFD5K Arachis hypogaea HOM05D005725 ORTHO05D007531 6.4e-69 265.8 441 39.2
DCAR_004356 Daucus carota HOM05D005725 ORTHO05D007531 5.4e-68 262.7 445 38.7
unitig_746.g26584 Utricularia gibba HOM05D005809 ORTHO05D007259 3.9e-66 256.5 249 52.6
CSS0030006 Camellia sinensis var. sinensis HOM05D005725 ORTHO05D007531 6.2e-64 249.2 485 37.1
Lsat_1_v5_gn_8_107401 Lactuca sativa HOM05D005725 ORTHO05D007531 4.0e-63 246.5 400 37.0
QL11p011022 Quercus lobata HOM05D005725 ORTHO05D007531 9.0e-63 245.4 254 50.0
arahy.Tifrunner.gnm1.ann1.G9C5AI Arachis hypogaea HOM05D005725 ORTHO05D007531 1.3e-61 241.5 441 37.9
SGA_v2.0_scaffold423G51459 Striga asiatica HOM05D005725 ORTHO05D007531 9.3e-60 235.3 207 59.9
Ciclev10015389m.g Citrus clementina HOM05D005725 ORTHO05D007531 1.6e-59 234.6 402 36.8
Sed0022851 Sechium edule HOM05D005725 ORTHO05D007531 3.1e-55 220.3 399 35.6
Haze_05198 Corylus avellana HOM05D005725 ORTHO05D007531 1.2e-54 218.4 273 43.6
Pp3c6_29180 Physcomitrium patens HOM05D005725 ORTHO05D007531 4.6e-51 206.5 544 28.9
SHI12770 Sapria himalayana HOM05D005725 ORTHO05D000023 5.1e-50 203.0 280 41.4
DCAR_004355 Daucus carota HOM05D005725 ORTHO05D007531 8.4e-45 185.7 260 41.9
Atru.chr2.2825 Acer truncatum HOM05D005725 ORTHO05D007531 1.3e-42 178.3 321 36.8
Mapoly0033s0026 Marchantia polymorpha HOM05D005725 ORTHO05D007531 3.1e-39 167.2 515 26.8
Sc05g0005240 Simmondsia chinensis HOM05D005725 ORTHO05D007531 6.5e-37 159.5 270 37.8
Duzib052G0524 Durio zibethinus HOM05D005725 ORTHO05D007531 4.2e-36 156.8 313 33.5
RcHm_v2.0_Chr5g0021611 Rosa chinensis HOM05D005725 ORTHO05D007531 1.1e-33 148.7 131 56.5
EL10Ac6g15292 Beta vulgaris HOM05D005725 ORTHO05D007531 3.7e-32 143.7 132 53.8
Ciclev10017729m.g Citrus clementina HOM05D005725 ORTHO05D007531 3.1e-31 140.6 114 56.1
AagrBONN_evm.TU.Sc2ySwM_368.2823 Anthoceros agrestis HOM05D005725 ORTHO05D007531 4.1e-31 140.2 483 26.1
RcHm_v2.0_Chr5g0021601 Rosa chinensis HOM05D005725 ORTHO05D007531 1.3e-29 135.2 284 33.5
SMO230G0054 Selaginella moellendorffii HOM05D005725 ORTHO05D007531 3.8e-29 133.7 186 38.2
CDE06G0984 Ceratophyllum demersum HOM05D005725 ORTHO05D007531 1.9e-28 131.3 280 32.9
Oeu005615.1 Olea europaea HOM05D000039 ORTHO05D005263 4.2e-28 130.2 102 55.9
unitig_746.g26585 Utricularia gibba HOM05D005725 ORTHO05D007531 3.6e-27 127.1 133 51.1
ECA232G1808 Erigeron canadensis HOM05D005725 ORTHO05D007531 4.7e-27 126.7 211 40.3
Oeu013488.1 Olea europaea HOM05D005725 ORTHO05D007531 4.7e-27 126.7 171 43.3
Potri.003G155900 Populus trichocarpa HOM05D005725 ORTHO05D007531 2.8e-24 117.5 149 43.6
TAR626G0843 Trochodendron aralioides HOM05D005725 ORTHO05D007531 4.8e-24 116.7 132 49.2
Haze_05199 Corylus avellana HOM05D005725 ORTHO05D007531 1.2e-22 112.1 133 45.9
CBR_g22873 Chara braunii HOM05D005725 ORTHO05D007531 6.5e-21 106.3 572 23.8
Glyma.06G212700 Glycine max HOM05D005725 ORTHO05D007531 6.5e-13 79.7 70 51.4
BcaC05g29074 Brassica carinata HOM05D005725 ORTHO05D007531 1.2e-11 75.5 138 34.8
SEGI_40606 Sequoiadendron giganteum HOM05D005725 ORTHO05D007531 8.0e-11 72.8 131 33.6
A03p08350 Brassica napus HOM05D005725 ORTHO05D007531 1.8e-10 71.6 271 27.3
BolC5t33962H Brassica oleracea HOM05D005725 ORTHO05D007531 2.3e-10 71.2 124 36.3
Dinv31193 Davidia involucrata HOM05D005725 ORTHO05D020553 3.0e-10 70.9 89 50.6
C09p34670 Brassica napus HOM05D005725 ORTHO05D007531 6.8e-10 69.7 137 34.3
BolC9t56313H Brassica oleracea HOM05D005725 ORTHO05D007531 6.8e-10 69.7 137 34.3
CiPaw.09G139700 Carya illinoinensis HOM05D005725 ORTHO05D007531 7.0e-07 59.7 141 30.5


User provided reference genes

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