Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M02015 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.6e-191 671.4 333 100.0
Migut.G01043 Erythranthe guttata HOM05D005903 ORTHO05D007293 3.4e-181 638.3 331 94.9
Nitab4.5_0010610g0030 Nicotiana tabacum HOM05D005903 ORTHO05D007293 2.6e-141 505.8 331 70.1
Nitab4.5_0000844g0290 Nicotiana tabacum HOM05D005903 ORTHO05D007293 1.6e-138 496.5 331 68.9
Solyc02g081840.4 Solanum lycopersicum HOM05D005903 ORTHO05D007293 1.5e-136 490.0 331 69.5
PGSC0003DMG400007316 Solanum tuberosum HOM05D005903 ORTHO05D007293 9.6e-136 487.3 331 68.9
Dinv07001 Davidia involucrata HOM05D005903 ORTHO05D007293 2.1e-135 486.1 323 71.5
Cc09_g05110 Coffea canephora HOM05D005903 ORTHO05D007293 8.1e-135 484.2 318 73.0
QL11p012010 Quercus lobata HOM05D005903 ORTHO05D007293 1.8e-134 483.0 331 68.6
Hma1.2p1_0088F.1_g045276 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 3.1e-134 482.3 331 69.5
GSVIVG01012154001 Vitis vinifera HOM05D005903 ORTHO05D007293 2.2e-132 476.1 331 69.2
vmacro03560 Vaccinium macrocarpon HOM05D005903 ORTHO05D007293 6.4e-132 474.6 347 66.3
CAN.G809.52 Capsicum annuum HOM05D005903 ORTHO05D007293 8.4e-132 474.2 330 67.0
Manes.03G070940 Manihot esculenta HOM05D005903 ORTHO05D007293 4.2e-131 471.9 331 66.8
TAR624G0428 Trochodendron aralioides HOM05D005903 ORTHO05D007293 5.5e-131 471.5 331 68.6
Cc00_g27340 Coffea canephora HOM05D005903 ORTHO05D007293 1.6e-130 469.9 318 72.0
Cpa.g.sc30.99 Carica papaya HOM05D005903 ORTHO05D007293 2.7e-130 469.2 330 67.9
CiPaw.09G138500 Carya illinoinensis HOM05D005903 ORTHO05D007293 3.5e-130 468.8 326 68.1
Atru.chr10.296 Acer truncatum HOM05D005903 ORTHO05D007293 7.9e-130 467.6 331 67.1
Thecc.02G003100 Theobroma cacao HOM05D005903 ORTHO05D007293 1.3e-127 460.3 331 66.5
Nn7g38356 Nelumbo nucifera HOM05D005903 ORTHO05D007293 1.6e-127 459.9 321 69.5
Eucgr.A00192 Eucalyptus grandis HOM05D005903 ORTHO05D007293 3.7e-127 458.8 321 67.0
SGA_v2.0_scaffold31G12765 Striga asiatica HOM05D005903 ORTHO05D007293 2.4e-126 456.1 326 70.9
MD05G1245400 Malus domestica HOM05D005903 ORTHO05D007293 1.2e-125 453.8 333 66.7
DCAR_003756 Daucus carota HOM05D005903 ORTHO05D007293 3.4e-125 452.2 366 60.9
CANSAT35G1866 Cannabis sativa HOM05D005903 ORTHO05D007293 4.5e-125 451.8 325 65.2
Lsat_1_v5_gn_1_24420 Lactuca sativa HOM05D005903 ORTHO05D007293 1.0e-124 450.7 320 68.8
BolC3t19474H Brassica oleracea HOM05D005903 ORTHO05D007293 3.8e-124 448.7 330 65.8
FAN16G3015 Fragaria x ananassa HOM05D005903 ORTHO05D007293 3.8e-124 448.7 332 65.7
BcaC07g40489 Brassica carinata HOM05D005903 ORTHO05D007293 6.5e-124 448.0 330 65.5
Thhalv10011094m.g Eutrema salsugineum HOM05D005903 ORTHO05D007293 6.5e-124 448.0 330 64.8
FAN11G1857 Fragaria x ananassa HOM05D005903 ORTHO05D007293 6.5e-124 448.0 332 65.7
BraA06t25085Z Brassica rapa HOM05D005903 ORTHO05D007293 8.4e-124 447.6 321 67.0
BraA09t40620Z Brassica rapa HOM05D005903 ORTHO05D007293 8.4e-124 447.6 330 64.8
Potri.001G076200 Populus trichocarpa HOM05D005903 ORTHO05D007293 8.4e-124 447.6 321 66.0
BcaC01g01793 Brassica carinata HOM05D005903 ORTHO05D007293 1.1e-123 447.2 330 65.5
C03p71840 Brassica napus HOM05D005903 ORTHO05D007293 1.1e-123 447.2 330 65.5
A06p19990 Brassica napus HOM05D005903 ORTHO05D007293 1.4e-123 446.8 321 67.0
FAN21G0687 Fragaria x ananassa HOM05D005903 ORTHO05D007293 1.4e-123 446.8 332 65.7
BolC8t51059H Brassica oleracea HOM05D005903 ORTHO05D007293 1.9e-123 446.4 330 65.5
FvH4_3g13050 Fragaria vesca HOM05D005903 ORTHO05D007293 1.9e-123 446.4 332 65.4
A09p51850 Brassica napus HOM05D005903 ORTHO05D007293 2.5e-123 446.0 330 64.5
Lj4g0014401 Lotus japonicus HOM05D005903 ORTHO05D007293 3.2e-123 445.7 321 65.1
Medtr4g094760 Medicago truncatula HOM05D005903 ORTHO05D007293 3.2e-123 445.7 324 64.8
C08p34580 Brassica napus HOM05D005903 ORTHO05D007293 4.2e-123 445.3 330 65.2
RcHm_v2.0_Chr5g0021241 Rosa chinensis HOM05D005903 ORTHO05D007293 4.2e-123 445.3 332 65.4
PGR044G2521 Punica granatum HOM05D005903 ORTHO05D007293 1.2e-122 443.7 332 63.3
Carub.0005s1376 Capsella rubella HOM05D005903 ORTHO05D007293 1.6e-122 443.4 330 64.2
Gohir.A11G047300 Gossypium hirsutum HOM05D005903 ORTHO05D007293 1.6e-122 443.4 323 65.9
EL10Ac5g11217 Beta vulgaris HOM05D005903 ORTHO05D007293 2.7e-122 442.6 331 64.4
AT3G47630 Arabidopsis thaliana HOM05D005903 ORTHO05D007293 3.5e-122 442.2 330 64.2
Ca_18231_v3 Cicer arietinum L. HOM05D005903 ORTHO05D007293 4.6e-122 441.8 321 64.5
FAN25G2454 Fragaria x ananassa HOM05D005903 ORTHO05D007293 7.9e-122 441.0 332 64.5
Gohir.D11G050900 Gossypium hirsutum HOM05D005903 ORTHO05D007293 3.9e-121 438.7 323 65.3
Dinv26323 Davidia involucrata HOM05D005903 ORTHO05D007293 5.1e-121 438.3 294 70.7
BcaB01g00896 Brassica carinata HOM05D005903 ORTHO05D007293 6.7e-121 438.0 330 64.5
ECA247G0018 Erigeron canadensis HOM05D005903 ORTHO05D007293 8.7e-121 437.6 319 66.8
Gorai.007G055300 Gossypium raimondii HOM05D005903 ORTHO05D007293 8.7e-121 437.6 323 65.0
Rhsim05G0003000 Rhododendron simsii HOM05D005903 ORTHO05D007293 8.7e-121 437.6 384 59.1
PSO675G2427 Papaver somniferum HOM05D005903 ORTHO05D007293 1.1e-120 437.2 319 66.1
CSS0034787 Camellia sinensis var. sinensis HOM05D005903 ORTHO05D007293 2.5e-120 436.0 317 68.5
AUR62036920 Chenopodium quinoa HOM05D005903 ORTHO05D007293 2.5e-120 436.0 331 63.7
AL5G26920 Arabidopsis lyrata HOM05D005903 ORTHO05D007293 3.3e-120 435.6 330 63.3
HanXRQChr12g0369311 Helianthus annuus HOM05D005903 ORTHO05D007293 9.7e-120 434.1 325 65.5
VMungo0251G1440 Vigna mungo HOM05D005903 ORTHO05D007293 1.3e-119 433.7 321 63.6
CARHR156310 Cardamine hirsuta HOM05D005903 ORTHO05D007293 2.2e-119 433.0 330 62.1
TPR.G23817 Trifolium pratense HOM05D005903 ORTHO05D007293 2.2e-119 433.0 324 63.9
ClCG01G025750 Citrullus lanatus HOM05D005903 ORTHO05D007293 3.7e-119 432.2 332 61.4
CsaV3_6G052990 Cucumis sativus L. HOM05D005903 ORTHO05D007293 4.8e-119 431.8 333 60.4
MELO3C007010.2 Cucumis melo HOM05D005903 ORTHO05D007293 1.1e-118 430.6 323 61.6
Aa31LG9G16250 Aethionema arabicum HOM05D005903 ORTHO05D007293 1.4e-118 430.3 330 62.7
Rhsim13G0219000 Rhododendron simsii HOM05D005903 ORTHO05D007293 2.4e-118 429.5 331 63.4
THA.LOC104812245 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 3.1e-118 429.1 363 57.6
Glyma.05G134300 Glycine max HOM05D005903 ORTHO05D007293 9.0e-118 427.6 321 62.6
Glyma.08G089000 Glycine max HOM05D005903 ORTHO05D007293 2.6e-117 426.0 321 62.3
THA.LOC104824626 Tarenaya hassleriana HOM05D005903 ORTHO05D007293 2.6e-117 426.0 363 57.6
Sp1g31680 Schrenkiella parvula HOM05D005903 ORTHO05D007293 3.4e-117 425.6 321 62.0
Hma1.2p1_0088F.1_g045273 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 5.5e-115 418.3 345 61.7
Hund09980 Selenicereus undatus HOM05D005903 ORTHO05D007293 7.2e-115 417.9 378 55.3
Ciclev10016117m.g Citrus clementina HOM05D005903 ORTHO05D007293 2.1e-114 416.4 293 66.2
Hma1.2p1_1011F.1_g247520 Hydrangea macrophylla HOM05D005903 ORTHO05D007293 4.6e-114 415.2 345 61.2
Dinv01020 Davidia involucrata HOM05D005903 ORTHO05D007293 1.5e-112 410.2 323 62.5
Aqoxy7G00859 Aquilegia oxysepala HOM05D005903 ORTHO05D007293 1.1e-110 404.1 322 63.0
Duzib052G0373 Durio zibethinus HOM05D005903 ORTHO05D007293 2.6e-109 399.4 353 58.6
TWI63G1157 Tripterygium wilfordii HOM05D005903 ORTHO05D007293 1.7e-108 396.7 331 57.4
Sabra01G0053000 Salix brachista HOM05D005903 ORTHO05D007293 2.9e-108 396.0 330 60.9
Sed0025041 Sechium edule HOM05D005903 ORTHO05D007293 1.9e-107 393.3 327 58.4
Rhsim07G0106900 Rhododendron simsii HOM05D005903 ORTHO05D007293 2.5e-107 392.9 331 60.4
ATR0605G282 Amborella trichopoda HOM05D005903 ORTHO05D007293 6.1e-106 388.3 321 59.2
Lj1C1150G3 Lonicera japonica HOM05D005903 ORTHO05D007293 7.4e-104 381.3 292 64.7
PSO675G2002 Papaver somniferum HOM05D005903 ORTHO05D007293 9.7e-104 380.9 319 59.6
Psat7g087640 Pisum sativum HOM05D005903 ORTHO05D007293 4.8e-103 378.6 252 68.7
Sopen02g026460 Solanum pennellii HOM05D005903 ORTHO05D007293 4.8e-103 378.6 256 71.1
Haze_05254 Corylus avellana HOM05D005903 ORTHO05D007293 1.5e-101 373.6 326 57.4
arahy.Tifrunner.gnm1.ann1.7A7AL1 Arachis hypogaea HOM05D005903 ORTHO05D007293 5.9e-101 371.7 320 57.2
Peaxi162Scf00036g02217 Petunia axillaris HOM05D005903 ORTHO05D007293 1.7e-100 370.2 294 60.2
AUR62032162 Chenopodium quinoa HOM05D005903 ORTHO05D007293 1.2e-98 364.0 277 65.0
HPP92_021274 Vanilla planifolia HOM05D005903 ORTHO05D007293 2.0e-93 346.7 319 55.5
Prupe.7G025500 Prunus persica HOM05D005903 ORTHO05D007293 1.7e-92 343.6 223 72.6
Prupe.4G118500 Prunus persica HOM05D005903 ORTHO05D007293 5.5e-91 338.6 245 69.4
Phvul.002G188100 Phaseolus vulgaris HOM05D005903 ORTHO05D007293 1.0e-89 334.3 264 62.1
SEGI_28167 Sequoiadendron giganteum HOM05D005903 ORTHO05D007293 5.2e-89 332.0 323 51.7
CDE06G1059 Ceratophyllum demersum HOM05D005903 ORTHO05D007293 5.7e-88 328.6 323 53.6
COL.COLO4_05791 Corchorus olitorius HOM05D005903 ORTHO05D007293 4.8e-79 298.9 183 73.8
AagrBONN_evm.TU.Sc2ySwM_344.2832 Anthoceros agrestis HOM05D005903 ORTHO05D007293 5.4e-78 295.4 326 48.5
unitig_46.g18341 Utricularia gibba HOM05D005903 ORTHO05D007293 1.2e-77 294.3 323 53.6
arahy.Tifrunner.gnm1.ann1.STP4KF Arachis hypogaea HOM05D005903 ORTHO05D007293 1.3e-76 290.8 319 48.6
Lalb_Chr07g0188231 Lupinus albus HOM05D005903 ORTHO05D007293 2.3e-76 290.0 183 72.7
Os11g0549650 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 1.6e-74 283.9 216 61.6
SMO367G0859 Selaginella moellendorffii HOM05D005903 ORTHO05D007293 1.0e-73 281.2 328 46.0
Oeu056062.1 Olea europaea HOM05D005903 ORTHO05D007293 5.7e-72 275.4 165 75.8
Zm00001eb201720 Zea mays HOM05D005903 ORTHO05D007293 5.7e-72 275.4 249 55.4
Pp3c7_4190 Physcomitrium patens HOM05D005903 ORTHO05D007293 3.7e-71 272.7 329 43.8
Mapoly0019s0171 Marchantia polymorpha HOM05D005903 ORTHO05D007293 3.5e-69 266.2 325 42.2
Gohir.D11G050975 Gossypium hirsutum HOM05D005903 ORTHO05D007293 7.8e-53 211.8 184 59.2
Os11g0549690 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 6.8e-49 198.7 152 59.2
Sc04g0004120 Simmondsia chinensis HOM05D005903 ORTHO05D007293 8.3e-47 191.8 123 68.3
Sc04g0004130 Simmondsia chinensis HOM05D005903 ORTHO05D007293 1.1e-46 191.4 167 58.1
Cfa024540 Carpinus fangiana HOM05D005903 ORTHO05D007293 6.2e-42 175.6 366 32.5
Migut.O00470 Erythranthe guttata HOM05D005903 ORTHO05D007293 1.4e-41 174.5 144 68.8
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.0e-41 172.9 182 48.4
Haze_05249 Corylus avellana HOM05D005903 ORTHO05D007293 1.7e-39 167.5 200 52.0
MCO11G061 Micromonas commoda HOM05D005903 ORTHO05D007293 3.9e-36 156.4 346 31.2
Lalb_Chr07g0188221 Lupinus albus HOM05D005903 ORTHO05D007293 4.3e-35 152.9 154 48.1
Cre10.g436900 Chlamydomonas reinhardtii HOM05D005903 ORTHO05D007293 9.0e-33 145.2 311 32.5
PRCOL_00001260 Prasinoderma coloniale HOM05D005903 ORTHO05D007293 2.7e-29 133.7 353 30.3
CARHR106840 Cardamine hirsuta HOM05D005903 ORTHO05D007293 2.8e-26 123.6 120 51.7
CAN.G508.15 Capsicum annuum HOM05D005903 ORTHO05D007293 6.4e-23 112.5 245 31.4
Oeu056063.2 Olea europaea HOM05D007234 ORTHO05D008488 4.0e-17 93.2 65 70.8
COL.COLO4_05792 Corchorus olitorius HOM05D005903 ORTHO05D007293 5.3e-17 92.8 76 59.2
Glyma.08G193350 Glycine max HOM05D005903 ORTHO05D007293 7.6e-16 89.0 59 69.5
Os05g0295700 Oryza sativa ssp. japonica HOM05D005903 ORTHO05D007293 5.5e-14 82.8 83 44.6
Migut.O00469 Erythranthe guttata HOM05D000398 ORTHO05D000551 1.6e-13 81.3 63 74.6
SHI32711 Sapria himalayana HOM05D005903 ORTHO05D007293 1.4e-09 68.2 45 60.0
CBR_g8146 Chara braunii HOM05D005903 ORTHO05D000048 2.4e-09 67.4 66 53.0
SHI32710 Sapria himalayana HOM05D005903 ORTHO05D007293 8.4e-07 58.9 85 44.7
Cfa001138 Carpinus fangiana HOM05D000398 ORTHO05D000551 5.5e-06 56.2 60 45.0


User provided reference genes

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