Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M02008 Erythranthe guttata HOM05D004432 ORTHO05D005427 2.9e-197 691.8 375 100.0
SalBow8G1652 Salvia bowleyana HOM05D004432 ORTHO05D005427 1.2e-150 537.0 376 77.4
SGA_v2.0_scaffold298G47706 Striga asiatica HOM05D004432 ORTHO05D005427 8.0e-147 524.2 377 79.3
SGA_v2.0_scaffold175G39329 Striga asiatica HOM05D004432 ORTHO05D005427 2.3e-130 469.5 438 59.4
Hma1.2p1_0088F.1_g045180 Hydrangea macrophylla HOM05D004432 ORTHO05D005427 9.2e-127 457.6 377 72.9
Oeu056059.4 Olea europaea HOM05D004432 ORTHO05D005427 9.2e-127 457.6 414 62.1
CSS0030674 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 2.7e-126 456.1 375 73.1
Dinv31191 Davidia involucrata HOM05D004432 ORTHO05D005427 1.0e-125 454.1 378 69.8
Oeu018409.2 Olea europaea HOM05D004432 ORTHO05D005427 1.0e-125 454.1 425 64.5
Thecc.02G004200 Theobroma cacao HOM05D004432 ORTHO05D005427 2.3e-125 453.0 376 63.6
Solyc02g081620.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 3.0e-125 452.6 377 67.6
PGSC0003DMG401017733 Solanum tuberosum HOM05D004432 ORTHO05D005427 8.6e-125 451.1 379 64.4
Peaxi162Scf00048g01413 Petunia axillaris HOM05D004432 ORTHO05D005427 1.1e-124 450.7 378 68.8
Cc09_g05240 Coffea canephora HOM05D004432 ORTHO05D005427 1.6e-123 446.8 356 64.6
CAN.G809.71 Capsicum annuum HOM05D004432 ORTHO05D005427 1.1e-122 444.1 388 67.0
COL.COLO4_18029 Corchorus olitorius HOM05D004432 ORTHO05D003521 1.1e-122 444.1 366 64.5
MD05G1247000 Malus domestica HOM05D004432 ORTHO05D005427 2.3e-122 443.0 375 64.0
Gohir.D12G047900 Gossypium hirsutum HOM05D004432 ORTHO05D005427 8.9e-122 441.0 376 66.2
Atru.chr10.352 Acer truncatum HOM05D004432 ORTHO05D005427 5.8e-121 438.3 378 63.2
GSVIVG01012145001 Vitis vinifera HOM05D004432 ORTHO05D005427 2.9e-120 436.0 377 65.0
Gohir.A12G049500 Gossypium hirsutum HOM05D004432 ORTHO05D005427 3.7e-120 435.6 376 66.2
MSTRG.16369 Avicennia marina HOM05D004432 ORTHO05D005427 8.3e-120 434.5 354 67.5
Phvul.002G325100 Phaseolus vulgaris HOM05D004432 ORTHO05D005427 9.2e-119 431.0 380 62.6
Manes.03G075400 Manihot esculenta HOM05D004432 ORTHO05D005427 1.2e-118 430.6 378 67.7
MD10G1227600 Malus domestica HOM05D004432 ORTHO05D005427 2.7e-118 429.5 376 62.5
Sabra03G0044900 Salix brachista HOM05D004432 ORTHO05D005427 2.7e-118 429.5 383 65.8
Lj1A1149G74 Lonicera japonica HOM05D004432 ORTHO05D005427 1.7e-117 426.8 422 58.5
Duzib248G0466 Durio zibethinus HOM05D004432 ORTHO05D005427 3.0e-117 426.0 402 61.2
Ciclev10015448m.g Citrus clementina HOM05D004432 ORTHO05D005427 5.1e-117 425.2 356 63.5
unitig_748.g7489 Utricularia gibba HOM05D004432 ORTHO05D005427 6.6e-117 424.9 375 64.0
FvH4_3g12940 Fragaria vesca HOM05D004432 ORTHO05D005427 1.1e-116 424.1 377 63.1
FAN16G2829 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.1e-116 424.1 377 63.1
CiPaw.10G104800 Carya illinoinensis HOM05D004432 ORTHO05D005427 9.5e-116 421.0 355 62.5
Sopen02g010370 Solanum pennellii HOM05D004432 ORTHO05D005427 9.5e-116 421.0 379 68.9
Peaxi162Scf00198g01525 Petunia axillaris HOM05D004432 ORTHO05D005427 1.2e-115 420.6 380 61.8
FAN25G3492 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.6e-115 420.2 377 62.6
RcHm_v2.0_Chr5g0021051 Rosa chinensis HOM05D004432 ORTHO05D005427 2.1e-115 419.9 377 63.1
CsaV3_6G052770 Cucumis sativus L. HOM05D004432 ORTHO05D005427 4.7e-115 418.7 377 60.5
TPR.G12851 Trifolium pratense HOM05D004432 ORTHO05D005427 4.7e-115 418.7 382 66.5
PSO541G2602 Papaver somniferum HOM05D004432 ORTHO05D005427 6.2e-115 418.3 384 59.1
TAR624G0396 Trochodendron aralioides HOM05D004432 ORTHO05D005427 6.2e-115 418.3 378 58.5
Sopen02g026240 Solanum pennellii HOM05D004432 ORTHO05D005427 1.4e-114 417.2 355 66.2
FAN21G3105 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.8e-114 416.8 377 62.3
Solyc02g032120.3 Solanum lycopersicum HOM05D004432 ORTHO05D005427 2.3e-114 416.4 379 68.3
MBI18_g00544_MAGBIO Magnolia biondii HOM05D004432 ORTHO05D005427 3.1e-114 416.0 383 64.5
Sed0004537 Sechium edule HOM05D004432 ORTHO05D005427 6.8e-114 414.8 381 60.4
Dinv05655 Davidia involucrata HOM05D004432 ORTHO05D005427 4.4e-113 412.1 378 68.3
CANSAT35G1493 Cannabis sativa HOM05D004432 ORTHO05D005427 6.4e-112 408.3 378 62.4
TWI63G0296 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 8.3e-112 407.9 377 61.0
ECA232G3357 Erigeron canadensis HOM05D004432 ORTHO05D005427 1.1e-111 407.5 376 60.6
Nitab4.5_0006794g0040 Nicotiana tabacum HOM05D004432 ORTHO05D005427 1.9e-111 406.8 355 61.7
Nitab4.5_0010401g0010 Nicotiana tabacum HOM05D004432 ORTHO05D005427 2.1e-110 403.3 355 61.4
Atru.chr8.662 Acer truncatum HOM05D004432 ORTHO05D005427 6.0e-110 401.7 356 61.0
Gorai.008G050900 Gossypium raimondii HOM05D004432 ORTHO05D005427 7.8e-110 401.4 352 64.2
Nn7g38330 Nelumbo nucifera HOM05D004432 ORTHO05D005427 7.8e-110 401.4 356 66.9
Actinidia33704 Actinidia chinensis HOM05D004432 ORTHO05D005427 1.7e-109 400.2 353 60.3
PGR042G3514 Punica granatum HOM05D004432 ORTHO05D005427 2.3e-109 399.8 384 58.9
ClCG01G025530 Citrullus lanatus HOM05D004432 ORTHO05D005427 3.9e-109 399.1 429 54.5
GSVIVG01015880001 Vitis vinifera HOM05D004432 ORTHO05D005427 5.1e-109 398.7 376 59.0
Duzib132G0752 Durio zibethinus HOM05D004432 ORTHO05D005427 6.6e-109 398.3 352 62.8
TWI15G0381 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.5e-108 397.1 376 60.6
HanXRQChr09g0257831 Helianthus annuus HOM05D004432 ORTHO05D005427 1.9e-108 396.7 377 64.2
Eucgr.E04313 Eucalyptus grandis HOM05D004432 ORTHO05D005427 2.1e-107 393.3 378 63.2
Prupe.4G117400 Prunus persica HOM05D004432 ORTHO05D005427 3.6e-107 392.5 376 60.9
DCAR_003760 Daucus carota HOM05D004432 ORTHO05D005427 1.1e-106 391.0 358 62.6
TWI34G0639 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.8e-106 390.2 394 58.4
FAN11G2748 Fragaria x ananassa HOM05D004432 ORTHO05D005427 1.2e-105 387.5 355 60.8
Potri.001G160700 Populus trichocarpa HOM05D004432 ORTHO05D005427 1.2e-105 387.5 374 58.8
Aqoxy1G01396 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 1.5e-105 387.1 356 66.9
Actinidia22430 Actinidia chinensis HOM05D004432 ORTHO05D005427 5.8e-105 385.2 353 63.5
MELO3C007033.2 Cucumis melo HOM05D004432 ORTHO05D005427 9.9e-105 384.4 355 58.3
CSS0046356 Camellia sinensis var. sinensis HOM05D004432 ORTHO05D005427 8.4e-104 381.3 399 57.1
Sabra01G0131600 Salix brachista HOM05D004432 ORTHO05D005427 1.1e-103 380.9 377 65.0
PSO675G3183 Papaver somniferum HOM05D004432 ORTHO05D005427 4.6e-102 375.6 365 56.4
Lalb_Chr05g0222011 Lupinus albus HOM05D004432 ORTHO05D005427 6.0e-102 375.2 378 56.9
arahy.Tifrunner.gnm1.ann1.AGE02H Arachis hypogaea HOM05D004432 ORTHO05D005427 7.8e-102 374.8 361 61.2
Glyma.08G049300 Glycine max HOM05D004432 ORTHO05D005427 1.0e-101 374.4 363 57.0
AT1G30970 Arabidopsis thaliana HOM05D004432 ORTHO05D005427 1.3e-101 374.0 384 57.8
VMungo0251G3730 Vigna mungo HOM05D004432 ORTHO05D005427 1.7e-101 373.6 378 60.6
arahy.Tifrunner.gnm1.ann1.GLQ3B3 Arachis hypogaea HOM05D004432 ORTHO05D005427 3.9e-101 372.5 361 60.9
TWI15G1036 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 1.1e-100 370.9 368 56.0
Medtr8g106220 Medicago truncatula HOM05D004432 ORTHO05D005427 1.5e-100 370.5 360 62.8
Carub.0001s2938 Capsella rubella HOM05D004432 ORTHO05D005427 7.3e-100 368.2 381 56.2
Glyma.05G241800 Glycine max HOM05D004432 ORTHO05D005427 7.3e-100 368.2 378 55.3
BcaB07g32757 Brassica carinata HOM05D004432 ORTHO05D005427 3.6e-99 365.9 381 58.8
Ca_17239_v3 Cicer arietinum L. HOM05D004432 ORTHO05D005427 4.8e-99 365.5 365 59.5
Psat7g005440 Pisum sativum HOM05D004432 ORTHO05D005427 4.8e-99 365.5 359 58.5
Cpa.g.sc30.114 Carica papaya HOM05D004432 ORTHO05D005427 9.0e-98 361.3 356 58.1
BcaB04g18194 Brassica carinata HOM05D004432 ORTHO05D005427 1.2e-97 360.9 386 58.0
Thhalv10008022m.g Eutrema salsugineum HOM05D004432 ORTHO05D005427 1.7e-96 357.1 380 59.7
THA.LOC104798567 Tarenaya hassleriana HOM05D004432 ORTHO05D005427 8.4e-96 354.8 357 61.6
Lsat_1_v5_gn_8_106840 Lactuca sativa HOM05D004432 ORTHO05D005427 1.1e-95 354.4 375 56.3
AL1G45380 Arabidopsis lyrata HOM05D004432 ORTHO05D005427 5.4e-95 352.1 358 56.4
Aa31LG6G12370 Aethionema arabicum HOM05D004432 ORTHO05D005427 2.7e-94 349.7 357 56.6
Sc16g0004480 Simmondsia chinensis HOM05D004432 ORTHO05D005427 7.8e-94 348.2 356 62.6
AUR62017849 Chenopodium quinoa HOM05D004432 ORTHO05D005427 5.1e-93 345.5 421 53.0
Lalb_Chr10g0095541 Lupinus albus HOM05D004432 ORTHO05D005427 2.1e-91 340.1 379 54.9
BraA09t39051Z Brassica rapa HOM05D004432 ORTHO05D005427 1.1e-90 337.8 379 54.9
EL10Ac6g15345 Beta vulgaris HOM05D004432 ORTHO05D005427 1.8e-90 337.0 384 55.7
ATR0568G227 Amborella trichopoda HOM05D004432 ORTHO05D005427 2.4e-90 336.7 398 54.5
Sp1g26830 Schrenkiella parvula HOM05D004432 ORTHO05D005427 2.4e-90 336.7 365 57.5
Lalb_Chr09g0330711 Lupinus albus HOM05D004432 ORTHO05D005427 1.5e-89 334.0 357 58.0
BcaC07g37789 Brassica carinata HOM05D004432 ORTHO05D005427 2.6e-89 333.2 378 52.6
AUR62003535 Chenopodium quinoa HOM05D004432 ORTHO05D005427 2.9e-88 329.7 360 56.1
BcaC05g27130 Brassica carinata HOM05D004432 ORTHO05D005427 1.1e-87 327.8 380 55.8
C05p30150 Brassica napus HOM05D004432 ORTHO05D005427 1.1e-87 327.8 380 55.8
BolC5t31752H Brassica oleracea HOM05D004432 ORTHO05D005427 1.4e-87 327.4 380 55.3
vmacro03556 Vaccinium macrocarpon HOM05D004432 ORTHO05D005427 7.1e-87 325.1 478 46.0
Lj4g0008002 Lotus japonicus HOM05D004432 ORTHO05D005427 2.7e-86 323.2 364 51.6
Hund04373 Selenicereus undatus HOM05D004432 ORTHO05D005427 6.7e-85 318.5 501 45.1
HPP92_024334 Vanilla planifolia HOM05D004432 ORTHO05D005427 1.1e-84 317.8 368 51.6
Cfa001128 Carpinus fangiana HOM05D004432 ORTHO05D005427 7.4e-84 315.1 326 57.7
SEGI_00495 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 7.4e-84 315.1 393 54.2
HPP92_006155 Vanilla planifolia HOM05D004432 ORTHO05D005427 2.8e-83 313.2 361 51.0
A08p10850 Brassica napus HOM05D004432 ORTHO05D005427 8.1e-83 311.6 358 52.0
Os09g0560900 Oryza sativa ssp. japonica HOM05D004432 ORTHO05D005427 1.8e-82 310.5 380 52.6
A09p35240 Brassica napus HOM05D004432 ORTHO05D005427 2.2e-80 303.5 358 53.4
QL11p012272 Quercus lobata HOM05D004432 ORTHO05D005427 8.4e-80 301.6 278 63.7
BolC8t48181H Brassica oleracea HOM05D004432 ORTHO05D005427 3.2e-79 299.7 357 50.4
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 1.2e-78 297.7 337 51.6
Mapoly0070s0095 Marchantia polymorpha HOM05D004432 ORTHO05D005427 1.1e-76 291.2 406 50.2
TWI32G0924 Tripterygium wilfordii HOM05D004432 ORTHO05D005427 7.4e-76 288.5 312 56.1
AagrBONN_evm.TU.Sc2ySwM_344.4234 Anthoceros agrestis HOM05D004432 ORTHO05D005427 3.4e-73 279.6 400 45.8
BraA08t33081Z Brassica rapa HOM05D004432 ORTHO05D005427 5.8e-73 278.9 357 49.0
Ah.03g147620 Amaranthus hybridus HOM05D004432 ORTHO05D005427 1.0e-72 278.1 341 49.3
Potri.003G074200 Populus trichocarpa HOM05D004432 ORTHO05D005427 3.8e-72 276.2 298 54.4
Pp3c22_1400 Physcomitrium patens HOM05D004432 ORTHO05D005427 4.2e-71 272.7 409 50.1
TAR629G1033 Trochodendron aralioides HOM05D004432 ORTHO05D005427 3.5e-70 269.6 280 59.3
CiPaw.09G137500 Carya illinoinensis HOM05D004432 ORTHO05D005427 1.3e-59 234.6 164 70.7
SMO239G0124 Selaginella moellendorffii HOM05D004432 ORTHO05D005427 5.3e-58 229.2 389 41.6
Rhsim13G0133800 Rhododendron simsii HOM05D004432 ORTHO05D005427 5.9e-57 225.7 303 50.8
RhsimUnG0176800 Rhododendron simsii HOM05D004432 ORTHO05D005427 5.9e-57 225.7 303 50.8
Haze_05275 Corylus avellana HOM05D004432 ORTHO05D005427 1.8e-53 214.2 271 56.8
Dinv23013 Davidia involucrata HOM05D004432 ORTHO05D005427 1.3e-51 208.0 249 50.2
SEGI_03989 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 1.1e-50 204.9 202 56.4
Rhsim13G0133700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-47 194.9 99 88.9
RhsimUnG0176700 Rhododendron simsii HOM05D004432 ORTHO05D005427 1.1e-47 194.9 99 88.9
Haze_05262 Corylus avellana HOM05D004432 ORTHO05D005427 2.5e-47 193.7 99 91.9
CBR_g1074 Chara braunii HOM05D004432 ORTHO05D005427 8.8e-45 185.3 155 60.6
CiPaw.09G137600 Carya illinoinensis HOM05D004432 ORTHO05D005427 4.4e-44 183.0 149 68.5
SHI20754 Sapria himalayana HOM05D000030 ORTHO05D000009 6.5e-40 169.1 669 28.3
Zm00001eb104750 Zea mays HOM05D004432 ORTHO05D005427 6.5e-40 169.1 317 41.3
Dinv23014 Davidia involucrata HOM05D004432 ORTHO05D005427 8.5e-40 168.7 94 85.1
Nitab4.5_0004903g0050 Nicotiana tabacum HOM05D004432 ORTHO05D005427 3.5e-33 146.7 228 46.1
SEGI_09071 Sequoiadendron giganteum HOM05D004432 ORTHO05D005427 6.5e-32 142.5 97 72.2
Atru.chr10.360 Acer truncatum HOM05D004432 ORTHO05D005427 5.5e-31 139.4 222 45.9
CARHR030510 Cardamine hirsuta HOM05D004432 ORTHO05D005427 5.7e-28 129.4 211 42.7
Sopen12g027920 Solanum pennellii HOM05D004432 ORTHO05D005427 5.4e-26 122.9 72 79.2
Pp3c19_17160 Physcomitrium patens HOM05D004432 ORTHO05D005427 1.6e-25 121.3 137 52.6
Cre06.g305200 Chlamydomonas reinhardtii HOM05D004432 ORTHO05D005427 6.6e-24 115.9 91 54.9
Cfa025961 Carpinus fangiana HOM05D004432 ORTHO05D005427 9.5e-23 112.1 98 51.0
Dinv01000 Davidia involucrata HOM05D004432 ORTHO05D005427 2.8e-22 110.5 180 51.7
GSVIVG01015874001 Vitis vinifera HOM05D004432 ORTHO05D005427 4.7e-22 109.8 66 80.3
MCO08G042 Micromonas commoda HOM05D004432 ORTHO05D005427 6.1e-22 109.4 172 42.4
Aqoxy1G01395 Aquilegia oxysepala HOM05D004432 ORTHO05D005427 1.3e-19 101.7 372 28.5
CAN.G958.2 Capsicum annuum HOM05D004432 ORTHO05D005427 4.6e-17 93.2 76 57.9
Lj1g0003853 Lotus japonicus HOM05D004432 ORTHO05D005427 7.8e-09 65.9 62 50.0
Psat7g229080 Pisum sativum HOM05D004432 ORTHO05D005427 1.0e-08 65.5 74 50.0


User provided reference genes

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