Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01997 Erythranthe guttata HOM05D003468 ORTHO05D002806 3.1e-84 315.1 159 100.0
Migut.M02021 Erythranthe guttata HOM05D003468 ORTHO05D002806 5.0e-66 254.6 168 82.1
Migut.M01993 Erythranthe guttata HOM05D003468 ORTHO05D002806 2.7e-27 125.9 149 51.7
MSTRG.12708 Avicennia marina HOM05D003468 ORTHO05D002806 5.1e-18 95.1 167 40.1
SGA_v2.0_scaffold77G25360 Striga asiatica HOM05D003468 ORTHO05D002806 3.8e-13 79.0 157 37.6
SGA_v2.0_scaffold120G32985 Striga asiatica HOM05D003468 ORTHO05D002806 3.2e-12 75.9 155 37.4
SalBow2G1693 Salvia bowleyana HOM05D003468 ORTHO05D002806 3.5e-11 72.4 156 35.3
FAN21G2193 Fragaria x ananassa HOM05D003468 ORTHO05D002806 4.6e-11 72.0 133 36.8
FvH4_3g40451 Fragaria vesca HOM05D003468 ORTHO05D002806 1.0e-10 70.9 133 36.1
Nn2g10321 Nelumbo nucifera HOM05D003468 ORTHO05D002806 3.0e-10 69.3 162 34.6
MSTRG.17916 Avicennia marina HOM05D003468 ORTHO05D002806 3.9e-10 68.9 158 36.7
Phvul.006G078200 Phaseolus vulgaris HOM05D003468 ORTHO05D002806 3.9e-10 68.9 147 32.7
MD03G1052200 Malus domestica HOM05D003468 ORTHO05D002806 5.1e-10 68.6 160 34.4
Glyma.18G052700 Glycine max HOM05D003468 ORTHO05D002806 6.6e-10 68.2 117 36.8
Prupe.6G041700 Prunus persica HOM05D003468 ORTHO05D002806 8.7e-10 67.8 155 32.9
Cc01_g15290 Coffea canephora HOM05D003468 ORTHO05D002806 1.1e-09 67.4 164 32.3
FAN11G0916 Fragaria x ananassa HOM05D003468 ORTHO05D002806 1.5e-09 67.0 138 35.5
PGR129G0007 Punica granatum HOM05D003468 ORTHO05D002806 1.9e-09 66.6 113 38.1
arahy.Tifrunner.gnm1.ann1.UJZR4Z Arachis hypogaea HOM05D003468 ORTHO05D002806 2.5e-09 66.2 118 38.1
Lalb_Chr15g0085871 Lupinus albus HOM05D003468 ORTHO05D002806 2.5e-09 66.2 104 40.4
PSO675G8835 Papaver somniferum HOM05D003468 ORTHO05D002806 4.3e-09 65.5 156 34.0
FAN16G1667 Fragaria x ananassa HOM05D003468 ORTHO05D002806 5.6e-09 65.1 132 34.8
HanXRQChr16g0522621 Helianthus annuus HOM05D003468 ORTHO05D002806 5.6e-09 65.1 146 31.5
PSO541G3532 Papaver somniferum HOM05D003468 ORTHO05D002806 5.6e-09 65.1 156 34.0
Psat5g003000 Pisum sativum HOM05D003468 ORTHO05D002806 7.3e-09 64.7 163 31.9
VMungo0540G0681 Vigna mungo HOM05D003468 ORTHO05D002806 9.6e-09 64.3 150 30.0
Aqoxy4G02393 Aquilegia oxysepala HOM05D003468 ORTHO05D002806 1.3e-08 63.9 161 31.1
Dinv28729 Davidia involucrata HOM05D003468 ORTHO05D002806 1.6e-08 63.5 169 30.8
Actinidia34492 Actinidia chinensis HOM05D003468 ORTHO05D002806 2.1e-08 63.2 135 31.9
DCAR_017858 Daucus carota HOM05D003468 ORTHO05D002806 2.1e-08 63.2 125 35.2
Glyma.06G216400 Glycine max HOM05D003468 ORTHO05D002806 2.1e-08 63.2 154 33.1
MD11G1054300 Malus domestica HOM05D003468 ORTHO05D002806 2.1e-08 63.2 160 32.5
Oeu058241.1 Olea europaea HOM05D003468 ORTHO05D002806 2.1e-08 63.2 154 35.7
CiPaw.14G050900 Carya illinoinensis HOM05D003468 ORTHO05D002806 2.8e-08 62.8 134 32.1
Glyma.11G186600 Glycine max HOM05D003468 ORTHO05D002806 4.8e-08 62.0 117 34.2
Lalb_Chr18g0054251 Lupinus albus HOM05D003468 ORTHO05D002806 4.8e-08 62.0 104 37.5
Gohir.D10G008000 Gossypium hirsutum HOM05D003468 ORTHO05D002806 6.2e-08 61.6 119 34.5
RcHm_v2.0_Chr5g0073101 Rosa chinensis HOM05D003468 ORTHO05D002806 6.2e-08 61.6 133 34.6
GSVIVG01024564001 Vitis vinifera HOM05D003468 ORTHO05D002806 8.1e-08 61.2 134 36.6
Ca_15053_v3 Cicer arietinum L. HOM05D003468 ORTHO05D002806 1.1e-07 60.8 141 31.9
QL01p024883 Quercus lobata HOM05D003468 ORTHO05D002806 1.1e-07 60.8 166 30.7
vmacro10619 Vaccinium macrocarpon HOM05D003468 ORTHO05D002806 1.1e-07 60.8 133 32.3
Haze_24464 Corylus avellana HOM05D003468 ORTHO05D002806 1.4e-07 60.5 166 32.5
Psat5g148920 Pisum sativum HOM05D003468 ORTHO05D002806 1.4e-07 60.5 117 35.9
QL02p099821 Quercus lobata HOM05D003468 ORTHO05D002806 1.4e-07 60.5 166 31.9
Cfa021527 Carpinus fangiana HOM05D003468 ORTHO05D002806 1.8e-07 60.1 151 33.8
Gorai.011G008700 Gossypium raimondii HOM05D003468 ORTHO05D002806 1.8e-07 60.1 119 33.6
CSS0029508 Camellia sinensis var. sinensis HOM05D003468 ORTHO05D002806 2.4e-07 59.7 165 30.3
Lj6g0018146 Lotus japonicus HOM05D003468 ORTHO05D002806 2.4e-07 59.7 117 32.5
Gohir.A10G008200 Gossypium hirsutum HOM05D003468 ORTHO05D002806 3.1e-07 59.3 119 35.3
Nitab4.5_0002620g0010 Nicotiana tabacum HOM05D003468 ORTHO05D002806 3.1e-07 59.3 156 30.1
arahy.Tifrunner.gnm1.ann1.DRQC3V Arachis hypogaea HOM05D003468 ORTHO05D002806 4.0e-07 58.9 108 35.2
RcHm_v2.0_Chr5g0000441 Rosa chinensis HOM05D003468 ORTHO05D002806 4.0e-07 58.9 159 32.7
FvH4_5g00450 Fragaria vesca HOM05D003468 ORTHO05D002806 5.3e-07 58.5 136 32.4
Potri.013G154500 Populus trichocarpa HOM05D003468 ORTHO05D002806 5.3e-07 58.5 139 35.3
Aqoxy6G01245 Aquilegia oxysepala HOM05D003468 ORTHO05D002806 6.9e-07 58.2 170 30.6
ECA247G2629 Erigeron canadensis HOM05D003468 ORTHO05D002806 6.9e-07 58.2 149 30.9
HPP92_019205 Vanilla planifolia HOM05D003468 ORTHO05D002806 6.9e-07 58.2 117 37.6
MELO3C026878.2 Cucumis melo HOM05D003468 ORTHO05D002806 1.2e-06 57.4 115 34.8
Phvul.009G025400 Phaseolus vulgaris HOM05D003468 ORTHO05D002806 1.2e-06 57.4 128 34.4
Thecc.06G237700 Theobroma cacao HOM05D003468 ORTHO05D002806 1.2e-06 57.4 131 32.1
CsaV3_6G013110 Cucumis sativus L. HOM05D003468 ORTHO05D002806 1.5e-06 57.0 115 33.9
Zm00001eb271970 Zea mays HOM05D024462 ORTHO05D002806 1.5e-06 57.0 152 33.6
CiPaw.13G064100 Carya illinoinensis HOM05D003468 ORTHO05D002806 2.0e-06 56.6 114 36.0
Lsat_1_v5_gn_9_13861 Lactuca sativa HOM05D003468 ORTHO05D002806 2.0e-06 56.6 130 29.2
Sed0021873 Sechium edule HOM05D003468 ORTHO05D002806 2.6e-06 56.2 117 34.2
Glyma.08G047600 Glycine max HOM05D003468 ORTHO05D002806 4.5e-06 55.5 126 30.2
Nitab4.5_0000002g0180 Nicotiana tabacum HOM05D003468 ORTHO05D002806 4.5e-06 55.5 156 29.5
TWI79G0734 Tripterygium wilfordii HOM05D003468 ORTHO05D002806 4.5e-06 55.5 113 38.9
CANSAT54G1733 Cannabis sativa HOM05D003468 ORTHO05D002806 5.8e-06 55.1 133 32.3
DCAR_020474 Daucus carota HOM05D002477 ORTHO05D001927 5.8e-06 55.1 64 42.2
Dinv12277 Davidia involucrata HOM05D003468 ORTHO05D002806 5.8e-06 55.1 122 32.8
Sed0014984 Sechium edule HOM05D003468 ORTHO05D002806 5.8e-06 55.1 114 36.0
Glyma.04G148800 Glycine max HOM05D003468 ORTHO05D002806 7.6e-06 54.7 139 30.9
DCAR_024874 Daucus carota HOM05D003468 ORTHO05D002806 9.9e-06 54.3 111 36.0
Sc16g0010520 Simmondsia chinensis HOM05D003468 ORTHO05D002806 9.9e-06 54.3 114 36.8


User provided reference genes

Program Settings