Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.4e-36 154.1 76 100.0
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.8e-34 148.7 76 96.1
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 1.5e-20 102.4 61 83.6
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.7e-19 99.0 72 69.4
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 2.2e-19 98.6 78 66.7
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 2.9e-19 98.2 69 68.1
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 2.9e-19 98.2 78 65.4
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 6.4e-19 97.1 57 84.2
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.9e-18 95.5 73 68.5
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 2.4e-18 95.1 78 65.4
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 4.1e-18 94.4 83 62.7
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 7.1e-18 93.6 76 65.8
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 9.2e-18 93.2 58 79.3
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 9.2e-18 93.2 73 63.0
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 9.2e-18 93.2 74 58.1
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 1.2e-17 92.8 81 61.7
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 1.2e-17 92.8 79 64.6
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.6e-17 92.4 57 75.4
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 2.1e-17 92.0 77 62.3
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 2.1e-17 92.0 71 69.0
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.1e-17 92.0 71 66.2
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 2.7e-17 91.7 81 61.7
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 2.7e-17 91.7 71 66.2
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 3.5e-17 91.3 71 66.2
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 3.5e-17 91.3 57 77.2
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 4.6e-17 90.9 60 70.0
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.6e-17 90.9 71 66.2
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 4.6e-17 90.9 72 65.3
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 6.0e-17 90.5 74 66.2
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 6.0e-17 90.5 78 64.1
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 7.8e-17 90.1 65 67.7
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 7.8e-17 90.1 61 70.5
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.0e-16 89.7 79 60.8
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 1.3e-16 89.4 62 62.9
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 1.3e-16 89.4 57 71.9
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.7e-16 89.0 79 62.0
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 1.7e-16 89.0 83 60.2
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.7e-16 89.0 60 70.0
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.7e-16 89.0 60 70.0
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 1.7e-16 89.0 58 75.9
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 2.3e-16 88.6 57 75.4
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 2.3e-16 88.6 85 60.0
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 3.0e-16 88.2 78 61.5
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 3.0e-16 88.2 58 72.4
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 3.0e-16 88.2 74 62.2
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 3.9e-16 87.8 73 63.0
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 3.9e-16 87.8 75 62.7
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 3.9e-16 87.8 62 69.4
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 5.1e-16 87.4 84 58.3
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 5.1e-16 87.4 75 60.0
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 5.1e-16 87.4 60 71.7
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 5.1e-16 87.4 60 70.0
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 5.1e-16 87.4 57 75.4
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 6.6e-16 87.0 83 62.7
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 6.6e-16 87.0 57 73.7
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 8.6e-16 86.7 86 57.0
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 8.6e-16 86.7 60 71.7
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.1e-15 86.3 78 55.1
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 1.5e-15 85.9 85 58.8
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 1.5e-15 85.9 60 70.0
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.5e-15 85.9 60 68.3
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.5e-15 85.9 59 71.2
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 1.9e-15 85.5 54 72.2
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 1.9e-15 85.5 54 72.2
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 1.9e-15 85.5 54 72.2
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 1.9e-15 85.5 54 72.2
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.9e-15 85.5 59 67.8
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.5e-15 85.1 77 61.0
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 2.5e-15 85.1 85 58.8
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 2.5e-15 85.1 57 71.9
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 3.3e-15 84.7 76 57.9
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 4.3e-15 84.3 74 58.1
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 4.3e-15 84.3 60 70.0
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 4.3e-15 84.3 63 68.3
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 4.3e-15 84.3 59 69.5
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 4.3e-15 84.3 59 69.5
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 5.6e-15 84.0 59 67.8
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 5.6e-15 84.0 57 71.9
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 7.3e-15 83.6 59 67.8
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 7.3e-15 83.6 70 62.9
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 2.1e-14 82.0 66 60.6
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 4.7e-14 80.9 72 56.9
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 1.1e-13 79.7 62 64.5
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.4e-13 79.3 60 60.0
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 1.4e-13 79.3 57 63.2
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 3.1e-13 78.2 63 58.7
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 3.1e-13 78.2 46 78.3
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 3.1e-13 78.2 46 76.1
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 6.8e-13 77.0 49 75.5
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.2e-12 76.3 53 64.2
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 4.4e-12 74.3 49 69.4
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 1.3e-11 72.8 50 66.0
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 1.4e-10 69.3 49 61.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 1.2e-09 66.2 49 59.2
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.1e-07 59.7 55 50.9
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.1e-06 55.5 51 51.0
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 2.8e-06 55.1 27 81.5
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 3.6e-06 54.7 48 54.2


User provided reference genes

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