Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 2.3e-78 295.4 143 100.0
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 2.7e-47 192.2 100 91.0
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.0e-45 186.0 124 75.8
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 4.4e-45 184.9 100 88.0
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 4.4e-45 184.9 100 88.0
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 9.8e-45 183.7 100 87.0
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 3.7e-44 181.8 100 86.0
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 3.7e-44 181.8 100 86.0
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 6.3e-44 181.0 100 86.0
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 6.3e-44 181.0 100 87.0
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 1.8e-43 179.5 123 73.2
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 7.0e-43 177.6 100 84.0
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 2.7e-42 175.6 101 83.2
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 3.5e-42 175.3 97 86.6
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 3.5e-42 175.3 101 84.2
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 3.5e-42 175.3 104 82.7
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 3.5e-42 175.3 101 83.2
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 4.5e-42 174.9 95 84.2
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 5.9e-42 174.5 100 81.0
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 5.9e-42 174.5 93 88.2
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 1.7e-41 172.9 100 80.0
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 1.7e-41 172.9 119 73.1
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 1.7e-41 172.9 96 82.3
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 2.3e-41 172.6 96 82.3
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 2.9e-41 172.2 114 73.7
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.9e-41 172.2 94 84.0
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 5.0e-41 171.4 92 85.9
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 6.5e-41 171.0 103 80.6
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 6.5e-41 171.0 101 82.2
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 6.5e-41 171.0 93 86.0
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 8.6e-41 170.6 102 80.4
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 8.6e-41 170.6 91 87.9
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 2.5e-40 169.1 113 73.5
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 3.3e-40 168.7 96 82.3
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 3.3e-40 168.7 90 87.8
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 4.2e-40 168.3 103 78.6
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 7.2e-40 167.5 103 77.7
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 7.2e-40 167.5 99 81.8
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 9.5e-40 167.2 103 77.7
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 9.5e-40 167.2 103 77.7
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 9.5e-40 167.2 91 85.7
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 9.5e-40 167.2 91 85.7
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 9.5e-40 167.2 90 86.7
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 9.5e-40 167.2 90 86.7
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 9.5e-40 167.2 103 77.7
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 1.2e-39 166.8 103 77.7
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 1.6e-39 166.4 106 75.5
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 2.1e-39 166.0 103 76.7
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 2.1e-39 166.0 106 76.4
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 2.1e-39 166.0 101 79.2
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 2.1e-39 166.0 91 86.8
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 2.1e-39 166.0 88 87.5
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 2.8e-39 165.6 88 88.6
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 3.6e-39 165.2 103 77.7
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 4.7e-39 164.9 98 82.7
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 6.1e-39 164.5 103 76.7
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 6.1e-39 164.5 88 86.4
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 6.1e-39 164.5 104 76.9
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 8.0e-39 164.1 103 77.7
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 8.0e-39 164.1 90 84.4
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 8.0e-39 164.1 104 76.9
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 1.0e-38 163.7 92 83.7
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 1.0e-38 163.7 90 85.6
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 1.4e-38 163.3 100 77.0
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 1.4e-38 163.3 88 85.2
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 1.8e-38 162.9 109 73.4
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 1.8e-38 162.9 88 86.4
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 3.0e-38 162.2 93 81.7
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 4.0e-38 161.8 88 87.5
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 8.9e-38 160.6 91 83.5
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 1.5e-37 159.8 99 75.8
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 1.5e-37 159.8 99 75.8
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 4.4e-37 158.3 90 80.0
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 9.8e-37 157.1 114 71.9
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 9.8e-37 157.1 98 76.5
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 2.2e-36 156.0 92 80.4
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 2.8e-36 155.6 83 88.0
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 3.7e-36 155.2 83 89.2
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.7e-36 155.2 95 76.8
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 7.0e-35 151.0 84 84.5
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 5.9e-34 147.9 92 78.3
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 1.3e-33 146.7 85 76.5
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 4.3e-32 141.7 157 51.6
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 7.3e-32 141.0 106 67.9
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 3.6e-31 138.7 98 70.4
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 8.9e-30 134.0 89 71.9
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 4.4e-29 131.7 102 65.7
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.8e-27 126.3 88 68.2
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 2.5e-24 115.9 100 61.0
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 8.9e-22 107.5 62 83.9
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 2.0e-21 106.3 64 79.7
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 2.7e-18 95.9 71 70.4
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 1.6e-15 86.7 63 65.1
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 8.1e-15 84.3 48 85.4
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 5.2e-14 81.6 41 82.9
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 8.9e-14 80.9 54 74.1
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 8.9e-14 80.9 54 74.1
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.2e-13 80.5 52 73.1
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 3.4e-13 79.0 56 64.3
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 5.8e-13 78.2 82 51.2
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 9.9e-13 77.4 54 70.4
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 1.3e-12 77.0 68 61.8
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 1.7e-12 76.6 59 69.5
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.9e-11 73.2 43 79.1
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.2e-10 70.5 40 85.0
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 4.7e-07 58.5 42 61.9


User provided reference genes

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