Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 1.2e-91 339.7 162 100.0
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 6.0e-67 257.7 164 75.0
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 1.8e-66 256.1 161 72.7
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 8.7e-58 227.3 162 67.3
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 4.3e-57 224.9 162 66.7
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 2.9e-53 212.2 151 64.9
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.1e-52 210.3 147 66.7
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 1.8e-50 203.0 163 58.9
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 4.3e-49 198.4 146 60.3
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 7.4e-49 197.6 163 57.1
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 2.8e-48 195.7 150 60.7
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 2.8e-48 195.7 157 60.5
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 3.7e-48 195.3 160 56.2
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 3.7e-48 195.3 150 60.7
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 6.3e-48 194.5 178 55.1
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 1.4e-47 193.4 150 60.7
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 1.4e-47 193.4 161 56.5
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 5.3e-47 191.4 150 60.0
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 9.0e-47 190.7 164 56.7
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.3e-45 186.8 160 57.5
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 3.8e-45 185.3 162 56.2
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 6.5e-45 184.5 153 57.5
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 6.5e-45 184.5 161 52.8
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 1.1e-44 183.7 143 58.7
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 5.5e-44 181.4 145 57.9
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 7.2e-44 181.0 140 56.4
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 7.2e-44 181.0 156 55.8
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 9.4e-44 180.6 145 57.9
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 9.4e-44 180.6 137 58.4
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 9.4e-44 180.6 161 52.2
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 1.2e-43 180.3 140 56.4
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 1.2e-43 180.3 140 56.4
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.2e-43 180.3 145 54.5
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 2.1e-43 179.5 139 60.4
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 2.1e-43 179.5 147 57.1
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 3.6e-43 178.7 159 54.7
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 3.6e-43 178.7 140 57.1
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 7.9e-43 177.6 139 59.7
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 7.9e-43 177.6 126 63.5
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 7.9e-43 177.6 155 53.5
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 1.0e-42 177.2 133 61.7
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.4e-42 176.8 149 51.7
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 2.3e-42 176.0 161 49.7
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 3.9e-42 175.3 127 62.2
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 3.9e-42 175.3 148 55.4
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 5.1e-42 174.9 149 52.3
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 5.1e-42 174.9 146 58.2
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 5.1e-42 174.9 143 58.7
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 5.1e-42 174.9 137 58.4
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 6.7e-42 174.5 149 51.0
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 1.5e-41 173.3 137 56.2
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 1.5e-41 173.3 160 49.4
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 1.5e-41 173.3 162 51.9
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 2.0e-41 172.9 149 50.3
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 3.3e-41 172.2 163 50.3
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.3e-41 172.2 149 50.3
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 4.3e-41 171.8 149 52.3
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 5.7e-41 171.4 150 52.7
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 5.7e-41 171.4 150 52.7
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 7.4e-41 171.0 150 52.7
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 7.4e-41 171.0 149 51.0
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 7.4e-41 171.0 143 54.5
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 9.7e-41 170.6 152 53.3
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-40 170.2 150 52.7
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 1.3e-40 170.2 140 53.6
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.3e-40 170.2 164 51.2
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.7e-40 169.9 134 60.4
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 1.7e-40 169.9 161 47.8
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.2e-40 169.5 148 54.7
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.8e-40 169.1 140 52.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.8e-40 169.1 143 56.6
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 4.8e-40 168.3 140 52.9
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 6.3e-40 167.9 143 53.8
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 1.8e-39 166.4 147 54.4
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 4.1e-39 165.2 143 53.1
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 4.1e-39 165.2 144 54.2
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 5.3e-39 164.9 133 55.6
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 5.3e-39 164.9 143 53.1
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.5e-38 163.3 155 49.0
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 2.6e-38 162.5 133 54.9
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 3.4e-38 162.2 131 55.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 4.5e-38 161.8 131 55.0
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 4.5e-38 161.8 137 54.0
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.0e-37 160.6 140 53.6
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 1.0e-37 160.6 137 53.3
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 2.2e-37 159.5 154 48.7
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.1e-36 157.1 131 55.0
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 3.2e-36 155.6 169 47.9
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 3.2e-36 155.6 135 54.1
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 9.4e-36 154.1 155 45.8
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 1.4e-34 150.2 141 52.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 4.4e-33 145.2 141 53.2
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 2.2e-32 142.9 153 47.7
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 1.4e-31 140.2 143 49.7
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 5.3e-31 138.3 145 48.3
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 2.6e-30 136.0 148 47.3
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.5e-28 129.4 107 56.1
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 6.1e-27 124.8 160 43.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 6.7e-26 121.3 101 55.4
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 1.7e-24 116.7 105 50.5
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 4.8e-24 115.2 93 57.0
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 3.1e-23 112.5 97 54.6
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 4.1e-23 112.1 192 32.3
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 4.1e-23 112.1 124 41.1
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 3.8e-21 105.5 135 38.5
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 5.0e-21 105.1 198 32.3
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 6.5e-21 104.8 131 38.2
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 2.7e-19 99.4 84 57.1
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.7e-16 90.1 82 50.0
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 9.1e-15 84.3 150 34.7
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 1.0e-13 80.9 67 53.7
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 5.0e-13 78.6 98 39.8
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 2.0e-09 66.6 48 62.5
Cfa010446 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.2e-08 63.2 46 67.4
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 1.8e-07 60.1 90 37.8
MBI18_g36125_MAGBIO Magnolia biondii HOM05D003289 ORTHO05D018396 5.9e-06 55.1 48 43.8


User provided reference genes

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