Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01969 Erythranthe guttata HOM05D003643 ORTHO05D005001 2.6e-283 978.0 488 100.0
SGA_v2.0_scaffold298G47674 Striga asiatica HOM05D003643 ORTHO05D005001 1.2e-224 783.1 495 78.8
VMungo0251G0454 Vigna mungo HOM05D003643 ORTHO05D005001 1.1e-220 770.0 488 77.7
Atru.chr1.1970 Acer truncatum HOM05D003643 ORTHO05D005001 4.6e-219 764.6 489 77.7
Cpa.g.sc178.8 Carica papaya HOM05D003643 ORTHO05D005001 6.6e-218 760.8 502 75.3
Phvul.L009001 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 6.6e-218 760.8 488 77.3
Psat0s5231g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.5e-217 759.6 488 76.8
Phvul.L001601 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.9e-217 759.2 488 77.0
Dinv35809 Davidia involucrata HOM05D003643 ORTHO05D005001 3.3e-217 758.4 482 77.6
Phvul.003G000252 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.3e-217 758.4 485 77.5
CANSAT21G2447 Cannabis sativa HOM05D003643 ORTHO05D005001 4.7e-216 754.6 490 75.7
MD05G1254800 Malus domestica HOM05D003643 ORTHO05D005001 8.1e-216 753.8 480 76.7
Glyma.20G021900 Glycine max HOM05D003643 ORTHO05D005001 2.3e-215 752.3 490 76.1
SalBow8G4557 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.3e-215 752.3 496 75.8
SalBow8G5428 Salvia bowleyana HOM05D003643 ORTHO05D005001 2.3e-215 752.3 496 75.8
Cfa023544 Carpinus fangiana HOM05D003643 ORTHO05D005001 2.0e-214 749.2 482 77.6
Glyma.07G222900 Glycine max HOM05D003643 ORTHO05D005001 5.8e-214 747.7 490 75.1
Lj1C1143T1 Lonicera japonica HOM05D003643 ORTHO05D005001 5.8e-214 747.7 481 77.1
Psat6g043080 Pisum sativum HOM05D003643 ORTHO05D005001 9.9e-214 746.9 488 76.2
Oeu060347.1 Olea europaea HOM05D003643 ORTHO05D005001 1.7e-213 746.1 486 75.7
Actinidia22386 Actinidia chinensis HOM05D003643 ORTHO05D005001 4.9e-213 744.6 493 75.9
Ca_18772_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 4.9e-213 744.6 482 76.1
Lj1g0023184 Lotus japonicus HOM05D003643 ORTHO05D005001 4.9e-213 744.6 497 74.6
RcHm_v2.0_Chr5g0019781 Rosa chinensis HOM05D003643 ORTHO05D005001 4.9e-213 744.6 490 76.1
Lj1g0022937 Lotus japonicus HOM05D003643 ORTHO05D005001 8.4e-213 743.8 497 74.6
FvH4_3g12070 Fragaria vesca HOM05D003643 ORTHO05D005001 1.1e-212 743.4 487 76.2
Prupe.4G109100 Prunus persica HOM05D003643 ORTHO05D005001 1.9e-212 742.7 485 75.7
Medtr4g083780 Medicago truncatula HOM05D003643 ORTHO05D005001 2.4e-212 742.3 491 75.6
CSS0044821 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 3.2e-212 741.9 481 75.9
MD10G1234900 Malus domestica HOM05D003643 ORTHO05D005001 3.2e-212 741.9 476 75.6
THA.LOC104822105 Tarenaya hassleriana HOM05D003643 ORTHO05D005001 4.1e-212 741.5 482 75.1
TWI77G0757 Tripterygium wilfordii HOM05D003643 ORTHO05D005001 4.1e-212 741.5 487 76.2
Nitab4.5_0002056g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.2e-211 740.0 498 74.7
FAN21G1938 Fragaria x ananassa HOM05D003643 ORTHO05D005001 1.6e-211 739.6 487 75.6
TAR365G0076 Trochodendron aralioides HOM05D003643 ORTHO05D005001 2.1e-211 739.2 486 74.5
Solyc02g069120.3 Solanum lycopersicum HOM05D003643 ORTHO05D005001 2.7e-211 738.8 489 74.8
Sopen02g018250 Solanum pennellii HOM05D003643 ORTHO05D005001 2.7e-211 738.8 489 74.8
PGR083G1065 Punica granatum HOM05D003643 ORTHO05D005001 4.6e-211 738.0 483 75.8
FAN25G0143 Fragaria x ananassa HOM05D003643 ORTHO05D005001 6.0e-211 737.6 487 75.6
Cc09_g06330 Coffea canephora HOM05D003643 ORTHO05D005001 7.8e-211 737.3 491 75.2
CiPaw.03G114100 Carya illinoinensis HOM05D003643 ORTHO05D005001 1.0e-210 736.9 486 75.3
TPR.G20995 Trifolium pratense HOM05D003643 ORTHO05D005001 2.3e-210 735.7 486 74.5
CAN.G1222.6 Capsicum annuum HOM05D003643 ORTHO05D005001 3.0e-210 735.3 490 74.7
HanXRQChr14g0433091 Helianthus annuus HOM05D003643 ORTHO05D005001 3.0e-210 735.3 473 75.9
Potri.004G075600 Populus trichocarpa HOM05D003643 ORTHO05D005001 3.0e-210 735.3 500 73.6
PGSC0003DMG400010363 Solanum tuberosum HOM05D003643 ORTHO05D005001 6.6e-210 734.2 489 74.2
GSVIVG01012096001 Vitis vinifera HOM05D003643 ORTHO05D005001 1.9e-209 732.6 482 76.6
HanXRQChr07g0189641 Helianthus annuus HOM05D003643 ORTHO05D005001 5.6e-209 731.1 476 75.6
BcaB01g04707 Brassica carinata HOM05D003643 ORTHO05D005001 1.2e-208 729.9 479 75.4
Eucgr.D01040 Eucalyptus grandis HOM05D003643 ORTHO05D005001 1.6e-208 729.6 495 73.9
vmacro11251 Vaccinium macrocarpon HOM05D003643 ORTHO05D005001 8.1e-208 727.2 500 72.8
arahy.Tifrunner.gnm1.ann1.PVMC8E Arachis hypogaea HOM05D003643 ORTHO05D005001 1.4e-207 726.5 492 73.8
A10p18340 Brassica napus HOM05D003643 ORTHO05D005001 2.4e-207 725.7 479 74.3
BraA10t43914Z Brassica rapa HOM05D003643 ORTHO05D005001 2.4e-207 725.7 479 74.3
BcaC04g19578 Brassica carinata HOM05D003643 ORTHO05D005001 5.2e-207 724.5 484 73.8
BcaC07g37705 Brassica carinata HOM05D003643 ORTHO05D005001 5.2e-207 724.5 478 75.3
CARHR215770 Cardamine hirsuta HOM05D003643 ORTHO05D005001 8.9e-207 723.8 474 75.1
Lsat_1_v5_gn_5_36401 Lactuca sativa HOM05D003643 ORTHO05D005001 8.9e-207 723.8 475 74.5
C09p54110 Brassica napus HOM05D003643 ORTHO05D005001 1.5e-206 723.0 484 73.6
BolC9t58281H Brassica oleracea HOM05D003643 ORTHO05D005001 1.5e-206 723.0 484 73.6
CsaV3_1G046560 Cucumis sativus L. HOM05D003643 ORTHO05D005001 1.5e-206 723.0 483 74.5
A03p10790 Brassica napus HOM05D003643 ORTHO05D005001 2.0e-206 722.6 482 74.7
Thhalv10013358m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 3.4e-206 721.8 482 74.5
Sed0017297 Sechium edule HOM05D003643 ORTHO05D005001 3.4e-206 721.8 483 74.7
Thecc.04G162500 Theobroma cacao HOM05D003643 ORTHO05D005001 4.4e-206 721.5 479 74.9
AT5G37340 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 5.8e-206 721.1 482 74.5
A08p10150 Brassica napus HOM05D003643 ORTHO05D005001 5.8e-206 721.1 478 74.9
BraA08t33014Z Brassica rapa HOM05D003643 ORTHO05D005001 5.8e-206 721.1 482 74.9
Lalb_Chr16g0385301 Lupinus albus HOM05D003643 ORTHO05D005001 5.8e-206 721.1 493 72.0
AL7G45920 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 7.6e-206 720.7 485 73.8
Carub.0006s2022 Capsella rubella HOM05D003643 ORTHO05D005001 1.3e-205 719.9 475 74.9
BcaB04g18097 Brassica carinata HOM05D003643 ORTHO05D005001 1.7e-205 719.5 481 74.4
BcaC01g06578 Brassica carinata HOM05D003643 ORTHO05D005001 1.7e-205 719.5 481 74.0
ECA238G3555 Erigeron canadensis HOM05D003643 ORTHO05D005001 2.2e-205 719.2 478 73.4
BraA03t10388Z Brassica rapa HOM05D003643 ORTHO05D005001 6.4e-205 717.6 493 73.2
AL6G33500 Arabidopsis lyrata HOM05D003643 ORTHO05D005001 8.4e-205 717.2 482 74.5
AT5G22480 Arabidopsis thaliana HOM05D003643 ORTHO05D005001 8.4e-205 717.2 479 74.9
Thhalv10027733m.g Eutrema salsugineum HOM05D003643 ORTHO05D005001 1.1e-204 716.8 481 74.2
SpUn0005_0160 Schrenkiella parvula HOM05D003643 ORTHO05D005001 1.1e-204 716.8 486 73.0
SGA_v2.0_scaffold95G28766 Striga asiatica HOM05D003643 ORTHO05D005001 1.4e-204 716.5 512 71.5
Sabra04G0050300 Salix brachista HOM05D003643 ORTHO05D005001 3.2e-204 715.3 501 72.3
CARHR191050 Cardamine hirsuta HOM05D003643 ORTHO05D005001 4.2e-204 714.9 482 73.2
BcaB08g36427 Brassica carinata HOM05D003643 ORTHO05D005001 5.4e-204 714.5 495 72.5
Sc22g0000430 Simmondsia chinensis HOM05D003643 ORTHO05D005001 9.3e-204 713.8 488 72.5
Duzib268G1178 Durio zibethinus HOM05D003643 ORTHO05D005001 1.2e-203 713.4 482 73.7
MELO3C021772.2 Cucumis melo HOM05D003643 ORTHO05D005001 2.1e-203 712.6 483 73.7
unitig_32.g11672 Utricularia gibba HOM05D003643 ORTHO05D005001 4.6e-203 711.4 481 73.2
Gohir.D10G121400 Gossypium hirsutum HOM05D003643 ORTHO05D005001 3.9e-202 708.4 477 73.8
Gorai.011G133500 Gossypium raimondii HOM05D003643 ORTHO05D005001 3.9e-202 708.4 477 73.8
Sp6g22770 Schrenkiella parvula HOM05D003643 ORTHO05D005001 3.9e-202 708.4 491 73.3
BolC3t13712H Brassica oleracea HOM05D003643 ORTHO05D005001 6.6e-202 707.6 484 73.1
FAN16G1159 Fragaria x ananassa HOM05D003643 ORTHO05D005001 2.5e-201 705.7 487 73.3
Oeu052674.3 Olea europaea HOM05D003643 ORTHO05D005001 1.4e-199 699.9 451 76.9
AUR62010551 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.8e-199 699.5 487 71.3
COL.COLO4_08070 Corchorus olitorius HOM05D003643 ORTHO05D005001 1.2e-198 696.8 530 67.4
Rhsim04G0157300 Rhododendron simsii HOM05D003643 ORTHO05D005001 4.4e-198 694.9 521 69.5
ECA246G0187 Erigeron canadensis HOM05D003643 ORTHO05D005001 7.6e-198 694.1 472 73.5
Lj1g0023481 Lotus japonicus HOM05D003643 ORTHO05D005001 2.2e-197 692.6 497 71.2
DCAR_007797 Daucus carota HOM05D003643 ORTHO05D005001 2.4e-196 689.1 486 72.2
arahy.Tifrunner.gnm1.ann1.EU78CH Arachis hypogaea HOM05D003643 ORTHO05D005001 2.3e-194 682.6 506 69.6
Nn7g37591 Nelumbo nucifera HOM05D003643 ORTHO05D005001 5.1e-194 681.4 483 70.2
Hund14697 Selenicereus undatus HOM05D003643 ORTHO05D005001 6.2e-192 674.5 490 69.0
CDE02G0779 Ceratophyllum demersum HOM05D003643 ORTHO05D005001 5.8e-190 667.9 490 67.3
EL10Ac5g12673 Beta vulgaris HOM05D003643 ORTHO05D005001 9.3e-188 660.6 560 62.9
AUR62017342 Chenopodium quinoa HOM05D003643 ORTHO05D005001 1.6e-187 659.8 574 59.8
Aa31LG9G17620 Aethionema arabicum HOM05D003643 ORTHO05D005001 3.0e-186 655.6 520 65.6
Hund01937 Selenicereus undatus HOM05D003643 ORTHO05D005001 8.7e-186 654.1 477 68.3
Zm00001eb058120 Zea mays HOM05D003643 ORTHO05D005001 1.1e-185 653.7 483 67.3
HPP92_015903 Vanilla planifolia HOM05D003643 ORTHO05D005001 2.1e-184 649.4 490 65.9
ATR0743G136 Amborella trichopoda HOM05D003643 ORTHO05D005001 4.8e-184 648.3 497 65.6
Mapoly0085s0072 Marchantia polymorpha HOM05D003643 ORTHO05D005001 4.8e-184 648.3 511 62.0
Os08g0471900 Oryza sativa ssp. japonica HOM05D003643 ORTHO05D005001 1.8e-183 646.4 464 69.8
PSO675G9021 Papaver somniferum HOM05D003643 ORTHO05D005001 4.5e-182 641.7 482 66.8
MBI07_g18519_MAGBIO Magnolia biondii HOM05D003643 ORTHO05D005001 1.0e-181 640.6 496 66.1
Pp3c15_5070 Physcomitrium patens HOM05D003643 ORTHO05D005001 2.2e-181 639.4 492 63.6
TPR.G20778 Trifolium pratense HOM05D003643 ORTHO05D005001 2.9e-181 639.0 476 67.2
Lsat_1_v5_gn_2_29841 Lactuca sativa HOM05D003643 ORTHO05D005001 7.9e-179 630.9 478 67.4
Aqoxy5G01635 Aquilegia oxysepala HOM05D003643 ORTHO05D005001 2.3e-178 629.4 480 66.0
TPR.G9485 Trifolium pratense HOM05D003643 ORTHO05D005001 2.3e-178 629.4 461 67.5
Ca_20206_v3 Cicer arietinum L. HOM05D003643 ORTHO05D005001 7.4e-177 624.4 479 64.3
Nitab4.5_0002463g0030 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.6e-176 623.2 498 66.3
Manes.01G122000 Manihot esculenta HOM05D003643 ORTHO05D005001 6.9e-175 617.8 488 66.0
Peaxi162Scf00128g01142 Petunia axillaris HOM05D003643 ORTHO05D005001 1.7e-173 613.2 487 66.3
Nitab4.5_0004569g0010 Nicotiana tabacum HOM05D003643 ORTHO05D005001 1.3e-168 597.0 505 64.0
CSS0005005 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 2.9e-165 585.9 406 72.4
SMO203G0021 Selaginella moellendorffii HOM05D003643 ORTHO05D005001 9.4e-164 580.9 447 62.9
CBR_g6566 Chara braunii HOM05D003643 ORTHO05D005001 7.9e-155 551.2 527 54.5
Phvul.003G000226 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.2e-150 537.3 349 76.5
CBR_g34896 Chara braunii HOM05D003643 ORTHO05D005001 7.7e-150 534.6 490 56.1
Phvul.002G099300 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 7.2e-148 528.1 379 72.6
PSO017G1140 Papaver somniferum HOM05D003643 ORTHO05D005001 4.4e-145 518.8 389 67.1
Ciclev10003667m.g Citrus clementina HOM05D003643 ORTHO05D005001 1.3e-144 517.3 375 70.9
Gohir.1Z049309 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.8e-143 513.5 357 72.3
ClCG01G009340 Citrullus lanatus HOM05D003643 ORTHO05D005001 7.0e-143 511.5 357 71.4
Ah.12g057940 Amaranthus hybridus HOM05D003643 ORTHO05D005001 1.0e-141 507.7 391 67.5
BolC8t48076H Brassica oleracea HOM05D003643 ORTHO05D005001 3.8e-141 505.8 357 72.3
QL07p008150 Quercus lobata HOM05D003643 ORTHO05D005001 2.6e-137 493.0 547 51.6
Peaxi162Scf00149g01022 Petunia axillaris HOM05D003643 ORTHO05D005001 5.5e-132 475.3 357 68.9
CBR_g6568 Chara braunii HOM05D003643 ORTHO05D005001 1.2e-123 447.6 464 51.1
Gohir.1Z049318 Gossypium hirsutum HOM05D003643 ORTHO05D005001 1.8e-122 443.7 305 72.8
Phvul.L001739 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 4.9e-120 435.6 386 61.7
C03p12370 Brassica napus HOM05D003643 ORTHO05D005001 1.1e-119 434.5 371 62.5
Phvul.003G000330 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.8e-114 417.2 272 75.0
Phvul.003G000304 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 2.2e-112 410.2 280 72.1
Haze_13620 Corylus avellana HOM05D003643 ORTHO05D005001 1.0e-109 401.4 275 73.8
Phvul.003G000278 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 3.5e-86 323.2 193 81.9
Actinidia36045 Actinidia chinensis HOM05D003643 ORTHO05D005001 1.9e-84 317.4 233 68.2
Cfa025656 Carpinus fangiana HOM05D003643 ORTHO05D005001 4.8e-83 312.8 472 39.4
Atru.chr3.103 Acer truncatum HOM05D003643 ORTHO05D005001 1.5e-76 291.2 244 65.2
Phvul.L008901 Phaseolus vulgaris HOM05D003643 ORTHO05D005001 1.5e-73 281.2 172 79.1
DCAR_017792 Daucus carota HOM05D003643 ORTHO05D005001 3.8e-72 276.6 204 72.5
SEGI_34727 Sequoiadendron giganteum HOM05D003643 ORTHO05D005001 2.5e-63 247.3 200 61.5
Psat3g171960 Pisum sativum HOM05D003643 ORTHO05D005001 8.5e-56 222.2 228 54.4
Psat6g162200 Pisum sativum HOM05D003643 ORTHO05D005001 1.1e-55 221.9 246 51.2
BolC8t48075H Brassica oleracea HOM05D003643 ORTHO05D018815 3.3e-52 210.3 130 76.9
ClCG01G009350 Citrullus lanatus HOM05D003643 ORTHO05D005001 2.2e-51 207.6 125 80.8
Lsat_1_v5_gn_5_36361 Lactuca sativa HOM05D003643 ORTHO05D018815 2.8e-51 207.2 132 75.8
Peaxi162Scf00149g01017 Petunia axillaris HOM05D003643 ORTHO05D018815 5.3e-50 203.0 134 75.4
Atru.chr8.2585 Acer truncatum HOM05D003643 ORTHO05D005001 5.0e-48 196.4 153 67.3
Atru.chr8.2696 Acer truncatum HOM05D003643 ORTHO05D005001 2.0e-44 184.5 255 46.7
Phvul.L001639 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 5.9e-41 172.9 99 81.8
Phvul.L008801 Phaseolus vulgaris HOM05D003643 ORTHO05D034905 5.9e-41 172.9 99 81.8
CSS0009011 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 5.0e-40 169.9 112 72.3
ATR0712G001 Amborella trichopoda HOM05D003643 ORTHO05D023464 5.5e-39 166.4 131 62.6
CSS0015856 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D005001 4.4e-36 156.8 112 69.6
CBR_g12037 Chara braunii HOM05D003643 ORTHO05D005001 5.0e-32 143.3 121 57.0
Lsat_1_v5_gn_5_135000 Lactuca sativa HOM05D003643 ORTHO05D005001 5.9e-25 119.8 97 63.9
Haze_13621 Corylus avellana HOM05D003643 ORTHO05D018815 1.9e-23 114.8 67 80.6
ClCG01G009330 Citrullus lanatus HOM05D003643 ORTHO05D018815 1.2e-22 112.1 63 84.1
Cc11_g00920 Coffea canephora HOM05D003643 ORTHO05D005001 6.1e-22 109.8 67 76.1
Haze_13619 Corylus avellana HOM05D003643 ORTHO05D034905 1.0e-21 109.0 97 63.9
Lsat_1_v5_gn_5_54460 Lactuca sativa HOM05D003643 ORTHO05D005001 1.0e-21 109.0 177 40.7
Gohir.A10G145401 Gossypium hirsutum HOM05D003643 ORTHO05D018815 1.4e-21 108.6 60 83.3
Psat0s3903g0040 Pisum sativum HOM05D003643 ORTHO05D005001 1.2e-20 105.5 65 84.6
CSS0030804 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.7e-19 101.7 65 75.4
CSS0023685 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 2.2e-19 101.3 69 71.0
CSS0024414 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.4e-18 98.6 65 72.3
CSS0049868 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 4.1e-18 97.1 65 70.8
CSS0012788 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D023464 1.1e-15 89.0 77 61.0
CSS0032340 Camellia sinensis var. sinensis HOM05D003643 ORTHO05D018815 7.5e-12 76.3 46 73.9
HanXRQChr06g0180401 Helianthus annuus HOM05D003643 ORTHO05D005001 9.2e-10 69.3 38 78.9


User provided reference genes

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