Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 9.8e-89 330.1 166 100.0
Migut.M00123 Erythranthe guttata HOM05D009438 ORTHO05D010870 1.2e-30 137.1 167 46.7
Migut.M00087 Erythranthe guttata HOM05D009438 ORTHO05D010870 2.3e-29 132.9 158 47.5
Dinv22854 Davidia involucrata HOM05D009438 ORTHO05D010870 8.2e-27 124.4 141 44.0
Dinv22850 Davidia involucrata HOM05D009438 ORTHO05D010870 3.4e-25 119.0 141 44.7
Oeu063129.1 Olea europaea HOM05D009438 ORTHO05D010870 4.5e-25 118.6 150 39.3
Oeu063123.1 Olea europaea HOM05D009438 ORTHO05D010870 1.0e-24 117.5 150 39.3
Dinv22851 Davidia involucrata HOM05D009438 ORTHO05D010870 1.3e-24 117.1 141 44.0
Oeu063135.1 Olea europaea HOM05D009438 ORTHO05D010870 1.7e-24 116.7 150 38.7
Dinv22852 Davidia involucrata HOM05D009438 ORTHO05D010870 3.8e-24 115.5 141 43.3
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 3.8e-24 115.5 141 43.3
Oeu063131.1 Olea europaea HOM05D009438 ORTHO05D010870 8.4e-24 114.4 157 38.2
Oeu063127.1 Olea europaea HOM05D009438 ORTHO05D010870 1.1e-23 114.0 150 38.7
Oeu000482.1 Olea europaea HOM05D009438 ORTHO05D010870 3.2e-23 112.5 166 37.3
Oeu063128.1 Olea europaea HOM05D009438 ORTHO05D010870 5.5e-23 111.7 150 37.3
SGA_v2.0_scaffold298G47654 Striga asiatica HOM05D009438 ORTHO05D010870 2.7e-22 109.4 162 39.5
Oeu063130.1 Olea europaea HOM05D009438 ORTHO05D010870 1.3e-21 107.1 146 37.0
Actinidia18154 Actinidia chinensis HOM05D009438 ORTHO05D010870 5.7e-20 101.7 156 36.5
Migut.M01955 Erythranthe guttata HOM05D011567 ORTHO05D010870 5.7e-20 101.7 152 36.8
Rhsim07G0137900 Rhododendron simsii HOM05D009438 ORTHO05D010870 1.8e-18 96.7 163 33.7
Actinidia14750 Actinidia chinensis HOM05D009438 ORTHO05D010870 2.4e-18 96.3 142 35.9
Dinv20266 Davidia involucrata HOM05D009438 ORTHO05D010870 5.3e-18 95.1 120 41.7
Rhsim07G0138100 Rhododendron simsii HOM05D009438 ORTHO05D010870 2.6e-17 92.8 143 32.9
Dinv29549 Davidia involucrata HOM05D003146 ORTHO05D001819 1.1e-15 87.4 154 33.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 5.5e-15 85.1 148 33.8
Dinv23896 Davidia involucrata HOM05D009438 ORTHO05D010870 7.2e-15 84.7 94 41.5
Actinidia18484 Actinidia chinensis HOM05D003146 ORTHO05D001819 2.3e-13 79.7 143 33.6
SGA_v2.0_scaffold298G47644 Striga asiatica HOM05D011567 ORTHO05D010870 3.0e-13 79.3 145 29.7
Oeu063137.1 Olea europaea HOM05D009438 ORTHO05D010870 5.1e-13 78.6 128 35.9
Dinv29548 Davidia involucrata HOM05D003146 ORTHO05D001819 6.7e-13 78.2 151 29.8
Solyc09g072950.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 8.8e-13 77.8 149 32.2
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.1e-12 77.4 154 32.5
Sopen09g028760 Solanum pennellii HOM05D003146 ORTHO05D001819 1.5e-12 77.0 150 33.3
Thecc.10G106100 Theobroma cacao HOM05D015467 ORTHO05D001819 2.0e-12 76.6 153 32.7
Oeu063136.1 Olea europaea HOM05D009438 ORTHO05D010870 4.3e-12 75.5 125 36.8
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.7e-12 74.3 154 29.9
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-11 73.9 143 28.7
PGR004G2081 Punica granatum HOM05D003146 ORTHO05D001819 1.7e-11 73.6 147 29.3
Solyc03g112180.1 Solanum lycopersicum HOM05D003146 ORTHO05D001819 1.7e-11 73.6 160 31.2
SalBow6G3300 Salvia bowleyana HOM05D011567 ORTHO05D010870 2.2e-11 73.2 144 29.9
SalBow8G4138 Salvia bowleyana HOM05D011567 ORTHO05D010870 2.2e-11 73.2 144 29.9
Sed0025500 Sechium edule HOM05D003146 ORTHO05D001819 2.8e-11 72.8 140 30.0
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 4.8e-11 72.0 153 28.1
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 6.3e-11 71.6 150 31.3
Rhsim07G0095800 Rhododendron simsii HOM05D003146 ORTHO05D001819 6.3e-11 71.6 143 32.2
PGSC0003DMG400003833 Solanum tuberosum HOM05D003146 ORTHO05D001819 6.3e-11 71.6 150 32.0
CAN.G338.39 Capsicum annuum HOM05D003146 ORTHO05D001819 8.2e-11 71.2 164 32.9
Nitab4.5_0010452g0030 Nicotiana tabacum HOM05D003146 ORTHO05D001819 8.2e-11 71.2 150 32.0
Rhsim04G0244000 Rhododendron simsii HOM05D003146 ORTHO05D001819 8.2e-11 71.2 165 30.3
C03p36070 Brassica napus HOM05D008385 ORTHO05D010806 1.1e-10 70.9 154 31.8
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.8e-10 70.1 159 28.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 3.1e-10 69.3 122 32.0
Hma1.2p1_3273F.1_g334810 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.1e-10 69.3 135 31.1
Hma1.2p1_3469F.1_g336200 Hydrangea macrophylla HOM05D003146 ORTHO05D001819 3.1e-10 69.3 135 31.1
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.1e-10 69.3 146 31.5
PGSC0003DMG400040362 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.1e-10 69.3 159 29.6
CAN.G338.41 Capsicum annuum HOM05D003146 ORTHO05D001819 5.3e-10 68.6 143 32.2
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.3e-10 68.6 156 30.1
Sed0022729 Sechium edule HOM05D003146 ORTHO05D001819 5.3e-10 68.6 161 30.4
MELO3C027585.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.9e-10 68.2 143 30.1
Actinidia36483 Actinidia chinensis HOM05D000573 ORTHO05D001819 9.1e-10 67.8 152 27.6
SalBow8G0673 Salvia bowleyana HOM05D011567 ORTHO05D010870 1.5e-09 67.0 145 31.0
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.5e-09 67.0 159 27.7
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.0e-09 66.6 156 30.1
PGR004G1752 Punica granatum HOM05D003146 ORTHO05D001819 2.0e-09 66.6 151 26.5
SalBow6G4673 Salvia bowleyana HOM05D011567 ORTHO05D010870 2.0e-09 66.6 145 31.0
ClCG11G011230 Citrullus lanatus HOM05D003146 ORTHO05D001819 2.6e-09 66.2 165 30.3
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 2.6e-09 66.2 159 27.7
Ciclev10033748m.g Citrus clementina HOM05D003146 ORTHO05D001819 3.4e-09 65.9 143 30.1
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-09 65.9 143 28.7
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.4e-09 65.9 156 29.5
COL.COLO4_04546 Corchorus olitorius HOM05D015467 ORTHO05D001819 4.5e-09 65.5 152 28.3
SalBow7G0519 Salvia bowleyana HOM05D011567 ORTHO05D010870 4.5e-09 65.5 141 27.0
A03p29810 Brassica napus HOM05D008385 ORTHO05D001819 5.9e-09 65.1 154 31.2
MELO3C019686.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.9e-09 65.1 114 34.2
THA.LOC104820282 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 5.9e-09 65.1 159 27.0
MELO3C000387.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.0e-08 64.3 143 30.1
Thhalv10022367m.g Eutrema salsugineum HOM05D003146 ORTHO05D001819 1.0e-08 64.3 157 29.3
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.3e-08 63.9 143 29.4
Thhalv10012260m.g Eutrema salsugineum HOM05D008385 ORTHO05D001819 1.3e-08 63.9 157 29.3
QL04p032132 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-08 63.9 152 30.3
QL08p052685 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-08 63.9 168 26.2
QL08p052692 Quercus lobata HOM05D003146 ORTHO05D001819 1.3e-08 63.9 168 26.2
SalBow7G3633 Salvia bowleyana HOM05D011567 ORTHO05D010870 1.3e-08 63.9 141 26.2
SalBow8G1287 Salvia bowleyana HOM05D011567 ORTHO05D010870 1.3e-08 63.9 151 29.8
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 1.3e-08 63.9 157 29.9
COL.COLO4_24558 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.7e-08 63.5 152 28.3
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-08 63.5 143 29.4
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.7e-08 63.5 143 29.4
SalBow6G0763 Salvia bowleyana HOM05D011567 ORTHO05D010870 1.7e-08 63.5 151 29.8
Rhsim04G0244100 Rhododendron simsii HOM05D003146 ORTHO05D001819 2.2e-08 63.2 130 31.5
vmacro07979 Vaccinium macrocarpon HOM05D003146 ORTHO05D001819 2.2e-08 63.2 165 30.3
COL.COLO4_04545 Corchorus olitorius HOM05D015467 ORTHO05D001819 2.9e-08 62.8 153 29.4
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.9e-08 62.8 143 29.4
QL04p007240 Quercus lobata HOM05D003146 ORTHO05D001819 2.9e-08 62.8 162 26.5
SalBow6G4528 Salvia bowleyana HOM05D011567 ORTHO05D010870 2.9e-08 62.8 145 27.6
SalBow8G3383 Salvia bowleyana HOM05D011567 ORTHO05D010870 2.9e-08 62.8 145 27.6
Atru.chr4.3057 Acer truncatum HOM05D001578 ORTHO05D001207 5.0e-08 62.0 143 30.8
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 5.0e-08 62.0 142 30.3
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 5.0e-08 62.0 140 29.3
COL.COLO4_11312 Corchorus olitorius HOM05D015467 ORTHO05D001819 6.5e-08 61.6 152 27.6
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-08 61.6 156 28.8
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.5e-08 61.6 143 29.4
Nn1g08310 Nelumbo nucifera HOM05D008403 ORTHO05D010317 8.5e-08 61.2 163 27.0
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 8.5e-08 61.2 148 27.7
CDE07G0552 Ceratophyllum demersum HOM05D001445 ORTHO05D003404 1.1e-07 60.8 141 27.0
COL.COLO4_24557 Corchorus olitorius HOM05D015467 ORTHO05D001819 1.1e-07 60.8 152 28.3
MELO3C027590.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.1e-07 60.8 143 29.4
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.4e-07 60.5 143 28.7
Nitab4.5_0002228g0040 Nicotiana tabacum HOM05D011410 ORTHO05D013015 1.9e-07 60.1 144 28.5
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 2.5e-07 59.7 153 29.4
MELO3C027828.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-07 59.7 143 28.7
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-07 59.7 140 27.1
MELO3C030067.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-07 59.7 143 27.3
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-07 59.7 156 27.6
MBI19_g08236_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D010044 2.5e-07 59.7 144 27.8
QL04p033186 Quercus lobata HOM05D003146 ORTHO05D001819 2.5e-07 59.7 152 29.6
AT1G48020 Arabidopsis thaliana HOM05D003146 ORTHO05D001819 3.2e-07 59.3 166 27.7
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 3.2e-07 59.3 154 31.8
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-07 59.3 159 28.3
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-07 59.3 159 28.3
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 3.2e-07 59.3 159 28.3
QL04p007226 Quercus lobata HOM05D003146 ORTHO05D001819 3.2e-07 59.3 162 25.9
Actinidia18487 Actinidia chinensis HOM05D003146 ORTHO05D001819 4.2e-07 58.9 121 29.8
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 4.2e-07 58.9 99 36.4
CDE06G2513 Ceratophyllum demersum HOM05D001445 ORTHO05D001261 4.2e-07 58.9 146 26.7
THA.LOC104825839 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 4.2e-07 58.9 150 26.7
AL1G54540 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 5.5e-07 58.5 166 27.7
ATR0693G401 Amborella trichopoda HOM05D001445 ORTHO05D001261 7.2e-07 58.2 142 23.9
MELO3C027265.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.2e-07 58.2 143 28.7
Rhsim03G0038600 Rhododendron simsii HOM05D000036 ORTHO05D005472 7.2e-07 58.2 148 25.7
MELO3C001272.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.4e-07 57.8 112 31.2
MELO3C035196.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.4e-07 57.8 129 30.2
MBI19_g19942_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 9.4e-07 57.8 145 27.6
Sp1g35000 Schrenkiella parvula HOM05D003146 ORTHO05D001819 9.4e-07 57.8 159 27.0
PGSC0003DMG400040957 Solanum tuberosum HOM05D014661 ORTHO05D001819 9.4e-07 57.8 158 27.2
MELO3C032509.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-06 57.4 143 28.0
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-06 57.4 143 27.3
Sed0025474 Sechium edule HOM05D003146 ORTHO05D001819 1.2e-06 57.4 152 27.0
MELO3C032417.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.6e-06 57.0 143 27.3
MBI19_g19941_MAGBIO Magnolia biondii HOM05D001578 ORTHO05D010317 1.6e-06 57.0 145 27.6
Peaxi162Scf00089g00132 Petunia axillaris HOM05D003146 ORTHO05D001819 1.6e-06 57.0 126 27.8
MELO3C027044.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.1e-06 56.6 143 27.3
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 2.1e-06 56.6 140 28.6
Dinv40360 Davidia involucrata HOM05D003556 ORTHO05D003404 2.1e-06 56.6 147 27.9
Migut.K00088 Erythranthe guttata HOM05D011410 ORTHO05D013015 2.1e-06 56.6 147 23.1
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.1e-06 56.6 154 29.2
Thhalv10022010m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 2.1e-06 56.6 120 30.8
THA.LOC104810183 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 2.1e-06 56.6 150 26.7
THA.LOC104810184 Tarenaya hassleriana HOM05D008385 ORTHO05D001819 2.1e-06 56.6 150 26.7
Aa31LG10G5720 Aethionema arabicum HOM05D008385 ORTHO05D001819 2.7e-06 56.2 153 28.8
Ciclev10010801m.g Citrus clementina HOM05D009438 ORTHO05D001819 2.7e-06 56.2 157 25.5
Ciclev10013964m.g Citrus clementina HOM05D001578 ORTHO05D001207 2.7e-06 56.2 148 28.4
Aa31LG10G5700 Aethionema arabicum HOM05D008385 ORTHO05D001819 3.6e-06 55.8 124 29.8
BcaB02g11337 Brassica carinata HOM05D003146 ORTHO05D001819 3.6e-06 55.8 159 25.2
Cpa.g.sc9.24 Carica papaya HOM05D001578 ORTHO05D001207 3.6e-06 55.8 114 33.3
MELO3C030065.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-06 55.8 143 27.3
MELO3C034867.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-06 55.8 155 27.1
QL04p005657 Quercus lobata HOM05D003146 ORTHO05D001819 3.6e-06 55.8 120 30.0
MELO3C027589.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.5 112 30.4
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 4.7e-06 55.5 144 29.9
CSS0037733 Camellia sinensis var. sinensis HOM05D001578 ORTHO05D001207 6.1e-06 55.1 116 30.2
CARHR037660 Cardamine hirsuta HOM05D003146 ORTHO05D001819 6.1e-06 55.1 159 25.8
Ciclev10003542m.g Citrus clementina HOM05D001578 ORTHO05D001207 6.1e-06 55.1 148 27.7
MELO3C028053.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-06 55.1 121 29.8
MELO3C030077.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.1e-06 55.1 143 27.3
CsaV3_6G021230 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.1e-06 55.1 150 27.3
CsaV3_6G026320 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.1e-06 55.1 156 26.9
CsaV3_6G026340 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.1e-06 55.1 156 26.9
CsaV3_6G027350 Cucumis sativus L. HOM05D003146 ORTHO05D001819 6.1e-06 55.1 156 26.9
Rhsim03G0038200 Rhododendron simsii HOM05D001578 ORTHO05D001207 6.1e-06 55.1 109 28.4
CsaV3_4G038000 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.9e-06 54.7 156 26.9
CsaV3_6G023780 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.9e-06 54.7 156 26.9
CsaV3_UNG007100 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.9e-06 54.7 156 26.9
CsaV3_UNG217460 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.9e-06 54.7 156 26.9
CsaV3_UNG235420 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.9e-06 54.7 156 26.9
MBI18_g25089_MAGBIO Magnolia biondii HOM05D004113 ORTHO05D001819 7.9e-06 54.7 162 26.5


User provided reference genes

Program Settings