Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 8.2e-163 577.0 297 100.0
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 9.8e-140 500.4 297 86.5
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.2e-137 493.4 294 85.7
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 1.2e-137 493.4 294 85.7
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 1.2e-134 483.4 297 81.8
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 1.6e-134 483.0 297 83.5
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 8.0e-134 480.7 297 83.2
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.7e-131 471.9 298 80.2
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 3.2e-130 468.8 302 80.1
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 4.1e-130 468.4 297 80.5
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.7e-129 465.7 294 79.6
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 6.6e-128 461.1 297 79.1
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 1.5e-127 459.9 297 75.4
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 1.5e-127 459.9 297 78.5
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 3.3e-127 458.8 297 77.8
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 4.3e-127 458.4 298 76.8
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 4.3e-127 458.4 298 76.8
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 7.3e-127 457.6 297 78.5
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 78.1
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 9.5e-127 457.2 297 78.1
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 4.7e-126 454.9 294 76.9
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 6.2e-126 454.5 297 76.4
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 6.2e-126 454.5 294 76.5
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 6.2e-126 454.5 294 76.5
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 8.0e-126 454.1 297 78.5
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.8e-125 453.0 297 77.8
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 2.3e-125 452.6 297 77.4
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 2.3e-125 452.6 297 77.4
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 2.3e-125 452.6 298 76.8
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 6.8e-125 451.1 297 76.1
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 8.9e-125 450.7 297 77.1
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 2.0e-124 449.5 297 77.1
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 2.0e-124 449.5 305 75.7
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 2.6e-124 449.1 297 77.1
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 3.4e-124 448.7 297 76.8
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 4.4e-124 448.4 297 75.1
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 7.5e-124 447.6 297 77.1
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 9.8e-124 447.2 295 75.9
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 9.8e-124 447.2 305 75.4
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-123 446.4 297 76.8
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 1.7e-123 446.4 295 76.3
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 1.7e-123 446.4 297 76.4
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 3.7e-123 445.3 297 76.8
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 8.3e-123 444.1 297 74.7
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 8.3e-123 444.1 298 74.8
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 1.4e-122 443.4 297 73.7
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 75.4
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.9e-122 443.0 297 75.4
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 2.4e-122 442.6 296 73.6
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 3.2e-122 442.2 294 74.1
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 5.4e-122 441.4 297 75.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 7.0e-122 441.0 297 75.1
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 1.2e-121 440.3 297 74.4
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 1.2e-121 440.3 297 75.1
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 2.7e-121 439.1 297 75.1
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 3.5e-121 438.7 297 74.4
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 6.0e-121 438.0 297 73.4
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 7.8e-121 437.6 341 67.4
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 1.3e-120 436.8 297 75.1
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.7e-120 436.4 315 70.5
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 3.0e-120 435.6 315 71.1
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 3.0e-120 435.6 297 75.8
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 3.9e-120 435.3 298 75.5
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 5.1e-120 434.9 297 74.4
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 1.1e-119 433.7 297 73.7
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 3.3e-119 432.2 299 74.9
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 3.3e-119 432.2 294 74.1
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 5.6e-119 431.4 282 76.6
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 5.6e-119 431.4 295 75.6
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.6e-118 429.9 294 73.5
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 1.6e-118 429.9 296 72.3
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 3.6e-118 428.7 297 74.1
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 8.1e-118 427.6 299 73.2
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.4e-117 426.8 315 69.8
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 5.2e-117 424.9 281 75.1
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 8.9e-117 424.1 297 71.7
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 1.2e-116 423.7 293 72.7
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 1.5e-116 423.3 297 71.7
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 2.0e-116 422.9 297 72.4
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 4.4e-116 421.8 284 73.9
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 9.9e-116 420.6 295 70.8
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.3e-115 420.2 295 71.2
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.3e-115 420.2 274 77.7
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 1.7e-115 419.9 295 70.2
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 1.7e-115 419.9 295 70.8
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 2.2e-115 419.5 295 70.5
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 4.9e-115 418.3 269 78.1
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 298 70.8
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.2e-114 415.6 298 70.1
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 4.1e-114 415.2 297 70.7
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 4.1e-114 415.2 294 69.7
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 4.1e-114 415.2 292 71.2
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 9.2e-114 414.1 297 70.4
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 1.2e-113 413.7 297 71.4
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 1.6e-113 413.3 295 69.2
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.3e-112 410.2 295 69.2
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.3e-112 410.2 295 69.2
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 2.3e-112 409.5 298 70.5
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 3.0e-112 409.1 297 69.7
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 6.6e-112 407.9 282 72.7
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 8.6e-112 407.5 297 69.7
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 1.5e-111 406.8 295 68.5
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 1.9e-111 406.4 277 74.7
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 2.1e-110 402.9 295 68.1
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 6.2e-110 401.4 295 69.2
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 8.1e-110 401.0 295 69.5
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 2.9e-107 392.5 297 68.0
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.3e-104 382.9 249 76.3
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 1.2e-97 360.5 226 78.8
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 2.7e-97 359.4 320 60.3
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 3.5e-97 359.0 297 65.0
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.0e-96 355.9 223 79.8
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.9e-95 353.2 291 58.8
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 2.6e-92 342.8 223 77.6
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 2.2e-91 339.7 233 72.5
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 1.1e-90 337.4 294 57.8
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 3.5e-89 332.4 297 60.6
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 4.6e-89 332.0 287 58.2
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 6.7e-88 328.2 287 57.8
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 1.1e-85 320.9 262 59.9
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 2.0e-84 316.6 223 70.9
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 7.6e-84 314.7 272 61.8
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 4.9e-83 312.0 295 55.3
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 1.4e-82 310.5 290 55.2
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 5.1e-80 302.0 223 68.2
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.1e-79 300.8 275 60.4
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 4.8e-70 268.9 256 54.3
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 2.0e-68 263.5 252 57.5
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 2.7e-65 253.1 177 75.1
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 2.0e-63 246.9 150 80.7
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 8.2e-62 241.5 224 58.0
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 1.8e-56 223.8 162 67.3
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 9.1e-53 211.5 203 57.1
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 7.7e-52 208.4 149 69.1
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 8.5e-51 204.9 143 68.5
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 8.8e-48 194.9 135 70.4
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 4.4e-47 192.6 182 61.0
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 9.4e-42 174.9 266 37.6
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 3.7e-38 162.9 308 35.1
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 1.8e-37 160.6 145 57.9
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 2.9e-35 153.3 106 75.5
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 8.3e-30 135.2 107 66.4
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.7e-28 130.2 99 63.6
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 5.0e-27 125.9 104 62.5
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 1.2e-25 121.3 267 30.3
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 8.3e-22 108.6 65 84.6
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 4.1e-21 106.3 126 49.2
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 1.3e-19 101.3 113 52.2
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 1.7e-19 100.9 81 64.2
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-14 84.3 113 45.1
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 4.1e-13 79.7 113 43.4
BcaB03g15995 Brassica carinata HOM05D004415 ORTHO05D005198 1.1e-10 71.6 91 47.3
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 2.1e-09 67.4 52 69.2
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 1.4e-08 64.7 45 66.7
SGA_v2.0_scaffold298G47630 Striga asiatica HOM05D004415 ORTHO05D005198 6.8e-08 62.4 59 54.2
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.5e-07 61.2 52 55.8
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.7e-06 57.8 52 51.9
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 1.7e-06 57.8 52 51.9


User provided reference genes

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