Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 2.2e-80 302.4 169 100.0
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 5.4e-34 148.3 153 62.7
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 3.1e-29 132.5 142 55.6
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 1.7e-27 126.7 130 59.2
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.7e-27 126.7 124 57.3
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 9.5e-23 110.9 135 51.9
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 3.7e-19 99.0 127 48.0
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 7.0e-18 94.7 118 44.9
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 1.2e-17 94.0 132 47.7
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 1.6e-17 93.6 126 42.1
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 4.6e-17 92.0 131 46.6
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 9.5e-15 84.3 161 39.1
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 9.5e-15 84.3 161 39.1
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.2e-14 84.0 125 48.0
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 2.1e-14 83.2 125 41.6
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 2.1e-14 83.2 120 42.5
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 2.8e-14 82.8 121 43.0
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.8e-14 82.8 127 41.7
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 2.8e-14 82.8 136 41.9
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 4.7e-14 82.0 113 43.4
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 6.2e-14 81.6 122 41.0
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 8.1e-14 81.3 163 37.4
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-13 80.1 130 42.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.3e-13 79.7 128 43.0
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 3.1e-13 79.3 121 38.8
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 3.1e-13 79.3 134 41.8
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 3.1e-13 79.3 125 42.4
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 6.8e-13 78.2 123 38.2
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 8.9e-13 77.8 130 41.5
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.2e-12 77.4 121 41.3
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 1.2e-12 77.4 127 40.9
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.5e-12 77.0 128 41.4
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 4.4e-12 75.5 127 41.7
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 9.9e-12 74.3 124 43.5
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 1.3e-11 73.9 128 42.2
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.7e-11 73.6 126 39.7
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 1.7e-11 73.6 134 38.1
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.7e-11 73.6 135 40.7
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 2.9e-11 72.8 111 44.1
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.9e-11 72.8 116 42.2
C07p51350 Brassica napus HOM05D005932 ORTHO05D006213 6.4e-11 71.6 130 40.8
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 1.1e-10 70.9 107 42.1
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.1e-10 70.9 130 40.8
BcaNung00838 Brassica carinata HOM05D005932 ORTHO05D006213 1.4e-10 70.5 131 39.7
BcaNung00840 Brassica carinata HOM05D005932 ORTHO05D006213 1.4e-10 70.5 131 39.7
BolC7t45634H Brassica oleracea HOM05D005932 ORTHO05D006213 1.4e-10 70.5 131 39.7
BraA03t14366Z Brassica rapa HOM05D005932 ORTHO05D006213 1.4e-10 70.5 130 40.0
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.9e-10 70.1 121 38.0
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 2.4e-10 69.7 111 42.3
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 3.2e-10 69.3 142 37.3
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 3.2e-10 69.3 134 39.6
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 3.2e-10 69.3 123 36.6
BcaC06g30675 Brassica carinata HOM05D005932 ORTHO05D006213 7.1e-10 68.2 132 40.2
A03p52900 Brassica napus HOM05D005932 ORTHO05D006213 7.1e-10 68.2 129 37.2
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 7.1e-10 68.2 110 41.8
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 9.2e-10 67.8 126 38.1
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.2e-09 67.4 125 36.0
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.2e-09 67.4 132 38.6
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 1.6e-09 67.0 119 40.3
Phvul.006G128300 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 1.6e-09 67.0 129 34.9
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 2.1e-09 66.6 128 38.3
ECA238G1329 Erigeron canadensis HOM05D005932 ORTHO05D006213 2.7e-09 66.2 128 39.1
CARHR228470 Cardamine hirsuta HOM05D005932 ORTHO05D006213 3.5e-09 65.9 130 36.9
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 3.5e-09 65.9 127 40.9
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 3.5e-09 65.9 121 41.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 3.5e-09 65.9 120 39.2
PGR083G0615 Punica granatum HOM05D005932 ORTHO05D006213 3.5e-09 65.9 121 35.5
Sp7g19900 Schrenkiella parvula HOM05D005932 ORTHO05D006213 4.6e-09 65.5 132 36.4
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 7.8e-09 64.7 133 38.3
TWI63G1224 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 7.8e-09 64.7 107 42.1
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 1.3e-08 63.9 130 36.2
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.3e-08 63.2 125 37.6
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 2.3e-08 63.2 119 37.8
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 3.0e-08 62.8 107 39.3
AL7G32200 Arabidopsis lyrata HOM05D005932 ORTHO05D006213 3.9e-08 62.4 127 37.8
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 3.9e-08 62.4 126 37.3
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 6.6e-08 61.6 132 34.1
Medtr8g088330 Medicago truncatula HOM05D005932 ORTHO05D006213 6.6e-08 61.6 125 33.6
RcHm_v2.0_Chr5g0016051 Rosa chinensis HOM05D005932 ORTHO05D006213 8.6e-08 61.2 123 34.1
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.1e-07 60.8 119 33.6
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.1e-07 60.8 117 33.3
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.5e-07 60.5 134 35.8
MELO3C002809.2 Cucumis melo HOM05D005932 ORTHO05D006213 1.9e-07 60.1 98 43.9
Lj6g0008899 Lotus japonicus HOM05D005932 ORTHO05D006213 2.5e-07 59.7 125 32.8
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 5.6e-07 58.5 130 33.8
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 7.3e-07 58.2 137 36.5
Carub.0007s1967 Capsella rubella HOM05D005932 ORTHO05D006213 9.5e-07 57.8 121 37.2
AT4G21740 Arabidopsis thaliana HOM05D005932 ORTHO05D006213 1.6e-06 57.0 126 34.9
Aa31LG6G3710 Aethionema arabicum HOM05D005932 ORTHO05D006213 2.1e-06 56.6 130 33.8
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 2.1e-06 56.6 137 33.6
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 2.8e-06 56.2 124 36.3
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 2.8e-06 56.2 160 31.9
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.6e-06 55.8 109 38.5
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 4.7e-06 55.5 126 34.1
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 4.7e-06 55.5 126 34.9
Thhalv10026499m.g Eutrema salsugineum HOM05D005932 ORTHO05D006213 6.2e-06 55.1 127 34.6
Medtr2g030220 Medicago truncatula HOM05D005932 ORTHO05D006213 6.2e-06 55.1 131 29.8
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 8.1e-06 54.7 136 35.3


User provided reference genes

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