Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01857 Erythranthe guttata HOM05D007962 ORTHO05D009990 1.5e-212 742.7 395 100.0
MSTRG.15202 Avicennia marina HOM05D007962 ORTHO05D009990 6.4e-62 242.3 414 43.2
Dinv22362 Davidia involucrata HOM05D007962 ORTHO05D009990 2.7e-44 183.7 453 37.7
Oeu006765.1 Olea europaea HOM05D007962 ORTHO05D009990 8.7e-43 178.7 427 38.6
Lj1A853T83 Lonicera japonica HOM05D007962 ORTHO05D009990 2.1e-36 157.5 439 36.7
Dinv08346 Davidia involucrata HOM05D007962 ORTHO05D009990 1.9e-34 151.0 314 40.4
Actinidia35282 Actinidia chinensis HOM05D007962 ORTHO05D009990 2.6e-31 140.6 434 32.3
RhsimUnG0258400 Rhododendron simsii HOM05D007962 ORTHO05D009990 4.9e-30 136.3 430 34.4
vmacro09563 Vaccinium macrocarpon HOM05D007962 ORTHO05D009990 4.9e-30 136.3 451 33.9
Actinidia18741 Actinidia chinensis HOM05D007962 ORTHO05D009990 4.2e-29 133.3 466 33.0
CSS0037131 Camellia sinensis var. sinensis HOM05D007962 ORTHO05D009990 4.2e-29 133.3 437 35.2
Sabra11G0110900 Salix brachista HOM05D007962 ORTHO05D009990 5.5e-29 132.9 426 31.9
GSVIVG01014440001 Vitis vinifera HOM05D007962 ORTHO05D009990 5.5e-29 132.9 449 31.8
Nitab4.5_0001320g0060 Nicotiana tabacum HOM05D007962 ORTHO05D009990 6.7e-27 125.9 384 34.1
MD03G1218200 Malus domestica HOM05D007962 ORTHO05D009990 9.6e-26 122.1 429 32.4
Cfa020503 Carpinus fangiana HOM05D007962 ORTHO05D009990 1.6e-25 121.3 428 31.1
Potri.001G407200 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.1e-24 118.6 422 32.0
Potri.011G126600 Populus trichocarpa HOM05D007962 ORTHO05D009990 1.1e-24 118.6 416 30.3
TAR627G0526 Trochodendron aralioides HOM05D007962 ORTHO05D009990 4.0e-24 116.7 481 30.1
CiPaw.11G176900 Carya illinoinensis HOM05D007962 ORTHO05D009990 2.0e-23 114.4 398 32.9
QL08p017718 Quercus lobata HOM05D007962 ORTHO05D009990 2.0e-23 114.4 491 29.9
Sopen10g002730 Solanum pennellii HOM05D007962 ORTHO05D009990 2.6e-23 114.0 315 34.6
HanXRQChr03g0077201 Helianthus annuus HOM05D007962 ORTHO05D009990 2.9e-22 110.5 416 31.5
Gorai.013G165900 Gossypium raimondii HOM05D007962 ORTHO05D009990 3.8e-22 110.2 393 31.6
Duzib213G0567 Durio zibethinus HOM05D007962 ORTHO05D009990 1.1e-21 108.6 300 36.3
Gohir.D13G148100 Gossypium hirsutum HOM05D007962 ORTHO05D009990 1.1e-21 108.6 304 34.5
COL.COLO4_09484 Corchorus olitorius HOM05D007962 ORTHO05D009990 1.4e-21 108.2 454 30.0
Haze_09532 Corylus avellana HOM05D007962 ORTHO05D009990 2.5e-21 107.5 440 30.5
FAN25G2958 Fragaria x ananassa HOM05D007962 ORTHO05D009990 4.2e-21 106.7 327 34.3
FAN21G0493 Fragaria x ananassa HOM05D007962 ORTHO05D009990 5.5e-21 106.3 302 35.4
Gohir.A13G143400 Gossypium hirsutum HOM05D007962 ORTHO05D009990 9.3e-21 105.5 386 31.1
FAN16G1594 Fragaria x ananassa HOM05D007962 ORTHO05D009990 1.2e-20 105.1 303 35.0
EL10Ac4g08053 Beta vulgaris HOM05D007962 ORTHO05D009990 1.6e-20 104.8 216 38.4
AUR62015596 Chenopodium quinoa HOM05D007962 ORTHO05D009990 2.1e-20 104.4 309 36.2
Cpa.g.sc80.118 Carica papaya HOM05D007962 ORTHO05D009990 3.5e-20 103.6 247 36.4
RcHm_v2.0_Chr5g0036061 Rosa chinensis HOM05D007962 ORTHO05D009990 3.5e-20 103.6 380 32.4
Duzib170G0916 Durio zibethinus HOM05D007962 ORTHO05D009990 4.6e-20 103.2 434 31.6
AUR62029307 Chenopodium quinoa HOM05D007962 ORTHO05D009990 1.0e-19 102.1 303 33.7
Manes.15G083000 Manihot esculenta HOM05D007962 ORTHO05D009990 1.0e-19 102.1 433 30.9
FAN11G3981 Fragaria x ananassa HOM05D007962 ORTHO05D009990 3.9e-19 100.1 459 30.1
Nitab4.5_0000207g0280 Nicotiana tabacum HOM05D007962 ORTHO05D009990 5.1e-19 99.8 369 33.9
Glyma.06G271400 Glycine max HOM05D007962 ORTHO05D009990 1.5e-18 98.2 229 39.7
Eucgr.F03357 Eucalyptus grandis HOM05D007962 ORTHO05D009990 1.9e-18 97.8 408 30.1
Nn1g06763 Nelumbo nucifera HOM05D007962 ORTHO05D009990 5.7e-18 96.3 272 36.0
Thecc.07G070800 Theobroma cacao HOM05D007962 ORTHO05D009990 7.4e-18 95.9 422 31.5
Atru.chr2.2909 Acer truncatum HOM05D007962 ORTHO05D009990 2.2e-17 94.4 424 29.0
arahy.Tifrunner.gnm1.ann1.NS3ZH3 Arachis hypogaea HOM05D007962 ORTHO05D009990 2.8e-17 94.0 123 46.3
PGR031G2376 Punica granatum HOM05D007962 ORTHO05D009990 2.8e-17 94.0 390 30.8
Lj3g0007855 Lotus japonicus HOM05D007962 ORTHO05D009990 8.2e-17 92.4 435 31.0
Sc16g0006740 Simmondsia chinensis HOM05D007962 ORTHO05D009990 8.2e-17 92.4 261 34.9
arahy.Tifrunner.gnm1.ann1.680K8M Arachis hypogaea HOM05D007962 ORTHO05D009990 1.4e-16 91.7 160 40.6
TWI39G0726 Tripterygium wilfordii HOM05D007962 ORTHO05D009990 1.4e-16 91.7 479 26.9
Medtr8g464490 Medicago truncatula HOM05D007962 ORTHO05D009990 2.0e-15 87.8 164 40.9
HanXRQChr13g0393921 Helianthus annuus HOM05D003190 ORTHO05D009990 2.6e-15 87.4 91 56.0
CANSAT11G1510 Cannabis sativa HOM05D007962 ORTHO05D009990 3.4e-15 87.0 455 29.9
VMungo1127G0274 Vigna mungo HOM05D007962 ORTHO05D009990 3.4e-15 87.0 224 34.8
PSO832G2030 Papaver somniferum HOM05D007962 ORTHO05D009990 4.5e-15 86.7 293 30.7
PSO210G4006 Papaver somniferum HOM05D007962 ORTHO05D009990 1.0e-14 85.5 297 30.6
TPR.G34588 Trifolium pratense HOM05D007962 ORTHO05D009990 1.7e-14 84.7 210 37.6
Lalb_Chr19g0134511 Lupinus albus HOM05D007962 ORTHO05D009990 2.2e-14 84.3 219 33.3
MBI02_g06003_MAGBIO Magnolia biondii HOM05D007962 ORTHO05D009990 2.2e-14 84.3 422 31.0
Psat4g163880 Pisum sativum HOM05D007962 ORTHO05D009990 2.9e-14 84.0 332 31.9
Phvul.011G137100 Phaseolus vulgaris HOM05D007962 ORTHO05D009990 1.9e-13 81.3 228 36.0
CsaV3_3G005940 Cucumis sativus L. HOM05D007962 ORTHO05D009990 2.5e-13 80.9 352 30.7
Ah.06g183570 Amaranthus hybridus HOM05D007962 ORTHO05D009990 5.5e-13 79.7 213 34.3
ClCG10G006460 Citrullus lanatus HOM05D007962 ORTHO05D009990 5.5e-13 79.7 382 29.6
CDE11G0480 Ceratophyllum demersum HOM05D063389 ORTHO05D009990 2.1e-12 77.8 233 33.5
ECA240G4716 Erigeron canadensis HOM05D000200 ORTHO05D001546 4.3e-10 70.1 404 27.7
MELO3C016557.2 Cucumis melo HOM05D007962 ORTHO05D009990 1.3e-09 68.6 363 29.8
Lsat_1_v5_gn_9_95621 Lactuca sativa HOM05D007962 ORTHO05D009990 1.4e-08 65.1 364 29.4
Sabra16G0268600 Salix brachista HOM05D007962 ORTHO05D009990 4.1e-08 63.5 331 29.9
Aqoxy1G03880 Aquilegia oxysepala HOM05D007962 ORTHO05D009990 9.1e-08 62.4 538 24.3
SEGI_13433 Sequoiadendron giganteum HOM05D007962 ORTHO05D009990 1.5e-07 61.6 96 37.5


User provided reference genes

Program Settings