Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.9e-99 364.8 182 100.0
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 5.9e-95 350.9 181 93.4
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 1.1e-93 346.7 181 92.3
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.4e-93 346.3 181 92.3
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 2.5e-93 345.5 181 91.7
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 2.5e-93 345.5 181 91.7
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 3.2e-93 345.1 181 91.7
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 4.2e-93 344.7 181 90.6
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 5.5e-93 344.4 181 90.6
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 9.4e-93 343.6 181 90.1
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 9.4e-93 343.6 181 91.2
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 1.2e-92 343.2 181 91.7
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 1.2e-92 343.2 181 91.7
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.2e-92 343.2 181 91.2
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.2e-92 343.2 181 90.6
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 1.6e-92 342.8 181 90.6
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 2.7e-92 342.0 181 90.1
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 2.7e-92 342.0 181 90.1
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 3.6e-92 341.7 181 90.6
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 3.6e-92 341.7 181 90.1
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 4.7e-92 341.3 181 90.1
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 4.7e-92 341.3 181 90.6
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 4.7e-92 341.3 181 91.2
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 4.7e-92 341.3 181 90.6
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 4.7e-92 341.3 178 92.1
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 6.1e-92 340.9 181 90.6
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 6.1e-92 340.9 181 90.6
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 6.1e-92 340.9 181 90.1
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.0e-91 340.1 181 90.1
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 91.2
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 89.5
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 88.4
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 88.4
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 89.5
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 1.4e-91 339.7 190 88.4
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 88.4
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 1.4e-91 339.7 181 88.4
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 1.8e-91 339.3 181 87.8
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 1.8e-91 339.3 181 90.1
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 1.8e-91 339.3 181 90.6
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 1.8e-91 339.3 181 89.5
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 2.3e-91 339.0 181 89.5
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.3e-91 339.0 181 90.1
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 2.3e-91 339.0 181 89.0
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 3.0e-91 338.6 181 91.2
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 3.0e-91 338.6 181 88.4
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.0e-91 338.6 181 87.8
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 3.0e-91 338.6 181 87.8
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 3.0e-91 338.6 181 89.0
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 87.3
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 89.5
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 89.5
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 87.8
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 90.1
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 87.8
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 88.4
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 3.9e-91 338.2 181 90.1
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 5.1e-91 337.8 181 89.0
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 5.1e-91 337.8 181 89.0
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 5.1e-91 337.8 181 89.0
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 5.1e-91 337.8 181 91.7
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 6.7e-91 337.4 181 89.0
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 8.8e-91 337.0 181 87.8
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 1.1e-90 336.7 181 87.3
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-90 336.3 181 88.4
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 1.5e-90 336.3 181 88.4
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 1.5e-90 336.3 181 88.4
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 2.0e-90 335.9 181 88.4
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 2.0e-90 335.9 181 87.3
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.6e-90 335.5 181 87.3
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 2.6e-90 335.5 181 87.3
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.3e-90 335.1 181 89.5
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 3.3e-90 335.1 181 87.3
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 4.4e-90 334.7 181 87.8
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 4.4e-90 334.7 181 86.7
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 9.7e-90 333.6 179 89.4
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 1.3e-89 333.2 181 85.6
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 1.7e-89 332.8 181 86.2
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 1.7e-89 332.8 181 87.8
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.2e-89 332.4 176 89.8
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.2e-89 332.4 181 87.3
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 2.8e-89 332.0 181 87.8
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 4.8e-89 331.3 181 87.3
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 6.3e-89 330.9 179 88.3
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 8.2e-89 330.5 194 82.5
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 8.2e-89 330.5 181 86.2
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 1.1e-88 330.1 181 86.7
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 1.1e-88 330.1 181 86.7
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 1.1e-88 330.1 181 86.7
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 84.5
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.7
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.7
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.7
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.7
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.2
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.4e-88 329.7 181 86.7
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 1.8e-88 329.3 181 87.8
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 1.8e-88 329.3 179 87.2
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 2.4e-88 328.9 181 84.5
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 4.1e-88 328.2 195 82.6
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 4.1e-88 328.2 181 85.6
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 5.3e-88 327.8 181 86.7
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 5.3e-88 327.8 181 86.7
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 7.0e-88 327.4 181 84.5
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 7.0e-88 327.4 181 84.5
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 1.2e-87 326.6 181 85.1
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 3.5e-87 325.1 200 80.5
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 4.5e-87 324.7 187 84.0
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 5.9e-87 324.3 181 85.1
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.0e-86 323.6 176 86.9
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 1.0e-86 323.6 176 86.9
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 3.8e-86 321.6 181 83.4
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 3.8e-86 321.6 181 84.0
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 3.2e-85 318.5 200 79.0
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 4.2e-85 318.2 181 82.3
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 5.5e-85 317.8 173 86.1
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 9.4e-85 317.0 197 77.7
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 1.4e-83 313.2 202 77.2
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 3.0e-83 312.0 178 83.7
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 9.7e-82 307.0 180 80.6
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 2.2e-81 305.8 235 67.2
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 2.2e-81 305.8 205 74.1
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.8e-80 302.8 169 84.0
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 1.0e-78 297.0 179 77.1
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 6.1e-76 287.7 181 73.5
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.0e-75 287.0 154 89.6
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.0e-75 287.0 158 88.0
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.3e-75 285.8 181 72.4
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 2.3e-75 285.8 181 72.4
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 2.6e-74 282.3 149 91.9
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 2.6e-74 282.3 181 77.9
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 4.4e-74 281.6 181 71.3
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 9.8e-74 280.4 181 76.2
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.4e-72 275.8 181 75.7
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 3.1e-72 275.4 181 70.7
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 5.4e-72 274.6 166 74.7
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 9.1e-72 273.9 174 74.1
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 2.0e-71 272.7 180 76.1
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.0e-70 270.4 148 85.1
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 1.3e-70 270.0 146 85.6
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 2.3e-67 259.2 181 72.9
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 2.4e-64 249.2 211 56.9
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 6.6e-62 241.1 152 73.0
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.3e-59 232.6 181 66.9
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 3.4e-58 228.8 167 60.5
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 7.5e-58 227.6 124 88.7
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 2.2e-57 226.1 181 65.2
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.2e-52 210.3 133 72.9
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.2e-48 195.7 163 55.2
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 7.0e-48 194.5 106 88.7
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 7.8e-47 191.0 175 53.1
Cfa020410 Carpinus fangiana HOM05D004191 ORTHO05D004887 1.3e-46 190.3 97 89.7
Psat7g161320 Pisum sativum HOM05D004191 ORTHO05D004887 2.5e-45 186.0 133 69.2
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 7.3e-45 184.5 182 56.6
COL.COLO4_37956 Corchorus olitorius HOM05D004191 ORTHO05D004887 6.8e-43 177.9 92 85.9
TWI38G1856 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.9e-41 172.6 97 79.4
SEGI_28528 Sequoiadendron giganteum HOM05D004191 ORTHO05D004887 1.7e-38 163.3 92 77.2
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 4.3e-37 158.7 85 89.4
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 8.9e-27 124.4 136 52.9
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 2.3e-22 109.8 68 75.0
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.4e-18 95.9 52 92.3
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 2.2e-17 93.2 52 86.5
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 7.1e-16 88.2 49 87.8
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 7.4e-13 78.2 45 82.2
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 2.8e-12 76.3 47 76.6
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 3.6e-12 75.9 70 60.0
Ah.12g056770 Amaranthus hybridus HOM05D004191 ORTHO05D004887 6.2e-12 75.1 68 54.4
Actinidia19733 Actinidia chinensis HOM05D004191 ORTHO05D004887 3.4e-10 69.3 35 88.6
Ah.07g199550 Amaranthus hybridus HOM05D004191 ORTHO05D004887 1.2e-07 60.8 35 74.3
Ah.07g199480 Amaranthus hybridus HOM05D004191 ORTHO05D060174 2.7e-07 59.7 35 71.4


User provided reference genes

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