Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01775 Erythranthe guttata HOM05D007003 ORTHO05D008499 9.0e-173 610.1 306 100.0
Oeu007586.1 Olea europaea HOM05D007003 ORTHO05D008499 7.3e-106 387.9 304 65.1
Nitab4.5_0001913g0010 Nicotiana tabacum HOM05D007003 ORTHO05D008499 1.4e-101 373.6 312 63.1
Nitab4.5_0003812g0060 Nicotiana tabacum HOM05D007003 ORTHO05D008499 6.2e-97 358.2 311 61.1
PGSC0003DMG400042605 Solanum tuberosum HOM05D007003 ORTHO05D008499 2.6e-95 352.8 318 58.5
Sopen07g032680 Solanum pennellii HOM05D007003 ORTHO05D008499 1.3e-94 350.5 318 59.4
Cc05_g13800 Coffea canephora HOM05D007003 ORTHO05D008499 1.7e-94 350.1 303 57.8
Solyc07g064480.1 Solanum lycopersicum HOM05D007003 ORTHO05D008499 1.1e-93 347.4 332 56.9
Dinv40746 Davidia involucrata HOM05D007003 ORTHO05D008499 3.9e-91 339.0 357 52.1
Peaxi162Scf00964g00113 Petunia axillaris HOM05D007003 ORTHO05D008499 9.6e-90 334.3 329 55.0
CSS0047719 Camellia sinensis var. sinensis HOM05D007003 ORTHO05D008499 2.8e-89 332.8 361 50.4
DCAR_022556 Daucus carota HOM05D007003 ORTHO05D008499 6.2e-89 331.6 294 58.5
Actinidia36944 Actinidia chinensis HOM05D001273 ORTHO05D000023 4.0e-88 328.9 301 57.5
Lj1P870T43 Lonicera japonica HOM05D007003 ORTHO05D008499 6.9e-88 328.2 296 61.1
Manes.03G124400 Manihot esculenta HOM05D007003 ORTHO05D008499 8.4e-86 321.2 325 51.7
vmacro11731 Vaccinium macrocarpon HOM05D007003 ORTHO05D008499 8.4e-86 321.2 304 55.3
Sabra16G0288900 Salix brachista HOM05D007003 ORTHO05D008499 7.8e-84 314.7 317 53.6
Potri.001G423900 Populus trichocarpa HOM05D007003 ORTHO05D008499 1.0e-83 314.3 317 53.6
MELO3C018208.2 Cucumis melo HOM05D007003 ORTHO05D008499 2.5e-82 309.7 318 50.0
Glyma.14G024800 Glycine max HOM05D007003 ORTHO05D008499 1.3e-81 307.4 384 45.6
CsaV3_3G044430 Cucumis sativus L. HOM05D007003 ORTHO05D008499 3.6e-81 305.8 323 50.2
Lalb_Chr04g0248491 Lupinus albus HOM05D007003 ORTHO05D008499 1.8e-80 303.5 372 46.5
unitig_578.g16000 Utricularia gibba HOM05D007003 ORTHO05D008499 3.1e-80 302.8 317 51.7
Rhsim06G0216400 Rhododendron simsii HOM05D000561 ORTHO05D000514 6.9e-80 301.6 303 53.8
Medtr5g092280 Medicago truncatula HOM05D007003 ORTHO05D008499 2.0e-79 300.1 349 48.4
CiPaw.12G128900 Carya illinoinensis HOM05D007003 ORTHO05D008499 3.4e-79 299.3 372 44.6
VMungo0647G1301 Vigna mungo HOM05D007003 ORTHO05D008499 7.6e-79 298.1 384 44.3
PSO675G0160 Papaver somniferum HOM05D007003 ORTHO05D008499 9.9e-79 297.7 301 52.8
Sed0008518 Sechium edule HOM05D007003 ORTHO05D008499 9.9e-79 297.7 310 50.0
Atru.chr2.3373 Acer truncatum HOM05D007003 ORTHO05D008499 2.9e-78 296.2 381 43.8
Phvul.008G266200 Phaseolus vulgaris HOM05D007003 ORTHO05D008499 1.9e-77 293.5 384 44.3
GSVIVG01037627001 Vitis vinifera HOM05D007003 ORTHO05D008499 2.4e-77 293.1 363 46.0
TAR627G0793 Trochodendron aralioides HOM05D007003 ORTHO05D008499 3.2e-77 292.7 398 43.2
Gohir.A04G018400 Gossypium hirsutum HOM05D007003 ORTHO05D008499 5.4e-77 292.0 353 48.2
MD11G1220900 Malus domestica HOM05D001273 ORTHO05D008499 9.3e-77 291.2 429 40.6
Gorai.009G435200 Gossypium raimondii HOM05D007003 ORTHO05D008499 1.2e-76 290.8 346 48.0
Lsat_1_v5_gn_5_6061 Lactuca sativa HOM05D007003 ORTHO05D008499 1.2e-76 290.8 299 53.2
Gohir.D05G367600 Gossypium hirsutum HOM05D007003 ORTHO05D008499 2.7e-76 289.7 346 47.7
Ciclev10008359m.g Citrus clementina HOM05D007003 ORTHO05D008499 7.9e-76 288.1 395 42.0
TPR.G22251 Trifolium pratense HOM05D007003 ORTHO05D008499 1.3e-75 287.3 327 49.2
EL10Ac4g07838 Beta vulgaris HOM05D007003 ORTHO05D008499 3.9e-75 285.8 383 42.6
ECA246G4814 Erigeron canadensis HOM05D001273 ORTHO05D000023 1.9e-74 283.5 323 48.9
Prupe.4G211300 Prunus persica HOM05D007003 ORTHO05D008499 1.9e-74 283.5 433 40.0
Nn1g03566 Nelumbo nucifera HOM05D007003 ORTHO05D008499 5.6e-74 282.0 444 40.8
BolC2t07756H Brassica oleracea HOM05D001404 ORTHO05D002309 9.6e-74 281.2 315 49.8
Ah.04g165820 Amaranthus hybridus HOM05D007003 ORTHO05D008499 1.3e-73 280.8 368 43.8
AUR62020466 Chenopodium quinoa HOM05D007003 ORTHO05D008499 2.8e-73 279.6 384 42.7
arahy.Tifrunner.gnm1.ann1.422Z41 Arachis hypogaea HOM05D007003 ORTHO05D008499 4.8e-73 278.9 416 41.1
C02p16580 Brassica napus HOM05D001404 ORTHO05D002309 1.1e-72 277.7 315 49.5
A02p10000 Brassica napus HOM05D001404 ORTHO05D008499 2.4e-72 276.6 314 50.0
BraA02t06064Z Brassica rapa HOM05D001404 ORTHO05D002309 2.4e-72 276.6 314 50.0
Cfa020358 Carpinus fangiana HOM05D007003 ORTHO05D008499 3.1e-72 276.2 439 38.3
TWI39G0907 Tripterygium wilfordii HOM05D007003 ORTHO05D008499 3.1e-72 276.2 298 51.7
arahy.Tifrunner.gnm1.ann1.6A6QM9 Arachis hypogaea HOM05D007003 ORTHO05D008499 6.9e-72 275.0 425 40.5
BcaB05g22167 Brassica carinata HOM05D007003 ORTHO05D008499 2.6e-71 273.1 322 47.8
AUR62015746 Chenopodium quinoa HOM05D007003 ORTHO05D008499 4.5e-71 272.3 384 41.9
RcHm_v2.0_Chr5g0039141 Rosa chinensis HOM05D007003 ORTHO05D008499 5.8e-71 271.9 437 38.4
LjContig00272g0003747 Lotus japonicus HOM05D007003 ORTHO05D008499 7.6e-71 271.6 385 41.8
Thecc.07G042400 Theobroma cacao HOM05D007003 ORTHO05D008499 1.0e-70 271.2 435 37.9
FvH4_3g22471 Fragaria vesca HOM05D007003 ORTHO05D008499 3.8e-70 269.2 422 39.6
Haze_09661 Corylus avellana HOM05D007003 ORTHO05D008499 4.9e-70 268.9 447 37.4
Eucgr.F00779 Eucalyptus grandis HOM05D007003 ORTHO05D008499 4.9e-70 268.9 357 43.1
FAN21G0080 Fragaria x ananassa HOM05D007003 ORTHO05D008499 1.4e-69 267.3 419 39.9
Cfa020360 Carpinus fangiana HOM05D007003 ORTHO05D008499 2.5e-69 266.5 427 39.8
Sp6g16850 Schrenkiella parvula HOM05D007003 ORTHO05D008499 9.3e-69 264.6 360 45.3
SGA_v2.0_scaffold424G51477 Striga asiatica HOM05D007003 ORTHO05D008499 1.2e-68 264.2 341 46.3
Cpa.g.sc97.17 Carica papaya HOM05D007003 ORTHO05D008499 1.6e-68 263.8 443 39.1
Psat2g013360 Pisum sativum HOM05D007003 ORTHO05D008499 1.0e-67 261.2 316 46.5
SalBow8G3099 Salvia bowleyana HOM05D007003 ORTHO05D008499 1.3e-67 260.8 200 65.5
CANSAT21G1622 Cannabis sativa HOM05D007003 ORTHO05D008499 3.9e-67 259.2 440 38.0
Thhalv10013739m.g Eutrema salsugineum HOM05D007003 ORTHO05D008499 3.9e-67 259.2 362 43.9
AT5G54880 Arabidopsis thaliana HOM05D007003 ORTHO05D008499 5.1e-67 258.8 361 43.5
Eucgr.F00790 Eucalyptus grandis HOM05D007003 ORTHO05D008499 6.7e-67 258.5 332 46.7
PGR119G0071 Punica granatum HOM05D007003 ORTHO05D008499 1.1e-66 257.7 376 42.8
QL03p009927 Quercus lobata HOM05D007003 ORTHO05D008499 1.1e-66 257.7 458 37.3
QL08p011145 Quercus lobata HOM05D007003 ORTHO05D008499 4.3e-66 255.8 458 37.3
HPP92_012320 Vanilla planifolia HOM05D007003 ORTHO05D008499 1.3e-65 254.2 360 40.8
Aqoxy7G03837 Aquilegia oxysepala HOM05D007003 ORTHO05D008499 2.1e-65 253.4 391 40.2
CARHR268220 Cardamine hirsuta HOM05D007003 ORTHO05D008499 2.1e-65 253.4 359 43.5
HPP92_012396 Vanilla planifolia HOM05D007003 ORTHO05D008499 2.1e-65 253.4 361 40.7
ATR0752G213 Amborella trichopoda HOM05D007003 ORTHO05D008499 4.8e-65 252.3 430 39.1
Eucgr.F00879 Eucalyptus grandis HOM05D007003 ORTHO05D008499 4.8e-65 252.3 312 47.1
Eucgr.F00955 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.4e-64 250.8 331 44.1
AL8G30340 Arabidopsis lyrata HOM05D007003 ORTHO05D008499 4.0e-64 249.2 367 41.4
THA.LOC104817663 Tarenaya hassleriana HOM05D007003 ORTHO05D008499 5.8e-63 245.4 374 40.1
Aa31LG3G10810 Aethionema arabicum HOM05D007003 ORTHO05D008499 9.3e-61 238.0 359 42.3
Duzib213G0769 Durio zibethinus HOM05D007003 ORTHO05D008499 1.6e-60 237.3 491 34.4
Actinidia05100 Actinidia chinensis HOM05D007003 ORTHO05D008499 3.5e-60 236.1 220 57.7
Eucgr.L01323 Eucalyptus grandis HOM05D007003 ORTHO05D008499 3.3e-58 229.6 321 43.0
Eucgr.F00922 Eucalyptus grandis HOM05D007003 ORTHO05D008499 2.8e-57 226.5 326 42.6
Ca_26481_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 4.5e-55 219.2 196 53.6
MBI02_g22102_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 9.4e-53 211.5 193 57.0
Sc16g0006140 Simmondsia chinensis HOM05D007003 ORTHO05D008499 1.2e-52 211.1 361 34.3
CDE11G0477 Ceratophyllum demersum HOM05D007003 ORTHO05D008499 6.1e-52 208.8 241 45.6
Zm00001eb219850 Zea mays HOM05D007003 ORTHO05D008499 2.5e-50 203.4 476 29.8
MBI02_g19288_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D008499 1.3e-49 201.1 552 30.6
SEGI_36701 Sequoiadendron giganteum HOM05D007003 ORTHO05D008499 1.7e-49 200.7 300 39.0
Os03g0568600 Oryza sativa ssp. japonica HOM05D007003 ORTHO05D008499 4.1e-48 196.1 475 30.9
Eucgr.F00913 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.2e-47 194.5 330 39.4
TPR.G17434 Trifolium pratense HOM05D007003 ORTHO05D008499 1.7e-46 190.7 199 49.7
Zm00001eb026290 Zea mays HOM05D007003 ORTHO05D008499 1.2e-44 184.5 159 54.1
Eucgr.F00928 Eucalyptus grandis HOM05D007003 ORTHO05D008499 2.7e-44 183.3 313 37.1
Eucgr.F00897 Eucalyptus grandis HOM05D007003 ORTHO05D008499 1.0e-43 181.4 296 37.2
Carub.0008s1518 Capsella rubella HOM05D007003 ORTHO05D008499 1.8e-43 180.6 202 49.5
BcaC03g14277 Brassica carinata HOM05D007003 ORTHO05D008499 1.3e-41 174.5 154 60.4
CAN.G337.121 Capsicum annuum HOM05D007003 ORTHO05D008499 3.3e-34 149.8 274 34.7
TPR.G22255 Trifolium pratense HOM05D005190 ORTHO05D006183 1.7e-33 147.5 247 35.6
Mapoly0032s0131 Marchantia polymorpha HOM05D007003 ORTHO05D008499 2.8e-33 146.7 330 31.2
AagrBONN_evm.TU.Sc2ySwM_362.2079 Anthoceros agrestis HOM05D007003 ORTHO05D008499 8.2e-33 145.2 297 35.0
Ca_03331_v3 Cicer arietinum L. HOM05D007003 ORTHO05D008499 5.9e-31 139.0 150 51.3
Pp3c4_4830 Physcomitrium patens HOM05D007003 ORTHO05D008499 3.8e-30 136.3 297 33.0
SMO339G0013 Selaginella moellendorffii HOM05D007003 ORTHO05D008499 2.2e-25 120.6 322 28.9
CAN.G337.122 Capsicum annuum HOM05D007003 ORTHO05D008499 1.1e-24 118.2 77 75.3
MD03G1204100 Malus domestica HOM05D007003 ORTHO05D008499 6.5e-22 109.0 93 53.8
TPR.G1180 Trifolium pratense HOM05D007003 ORTHO05D008499 7.2e-21 105.5 83 60.2
TPR.G1231 Trifolium pratense HOM05D007003 ORTHO05D008499 1.0e-19 101.7 145 42.8
MBI02_g22101_MAGBIO Magnolia biondii HOM05D007003 ORTHO05D002463 8.8e-19 98.6 94 51.1
Zm00001eb352490 Zea mays HOM05D006576 ORTHO05D008499 2.4e-16 90.5 83 48.2
ClCG05G014280 Citrullus lanatus HOM05D007003 ORTHO05D008499 6.6e-14 82.4 260 25.4
Actinidia05099 Actinidia chinensis HOM05D001273 ORTHO05D000023 1.9e-13 80.9 60 63.3
Medtr0590s0020 Medicago truncatula HOM05D007003 ORTHO05D263438 1.4e-11 74.7 155 30.3


User provided reference genes

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