Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01757 Erythranthe guttata HOM05D005555 ORTHO05D006923 4.6e-239 830.9 435 100.0
MSTRG.6923 Avicennia marina HOM05D005555 ORTHO05D006923 1.8e-214 749.2 432 89.4
SGA_v2.0_scaffold172G39000 Striga asiatica HOM05D005555 ORTHO05D006923 9.1e-203 710.3 440 84.3
GSVIVG01037655001 Vitis vinifera HOM05D005555 ORTHO05D006923 1.6e-194 682.9 426 81.5
Eucgr.F03470 Eucalyptus grandis HOM05D005555 ORTHO05D006923 6.1e-191 671.0 428 79.9
CSS0046165 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 2.6e-189 665.6 430 78.4
Dinv22259 Davidia involucrata HOM05D005555 ORTHO05D006923 1.7e-188 662.9 433 78.1
Gorai.009G438400 Gossypium raimondii HOM05D005555 ORTHO05D006923 2.2e-188 662.5 424 80.4
TWI39G0347 Tripterygium wilfordii HOM05D005555 ORTHO05D006923 2.2e-188 662.5 426 79.6
Duzib268G1179 Durio zibethinus HOM05D005555 ORTHO05D006923 3.5e-186 655.2 423 79.7
QL08p010014 Quercus lobata HOM05D005555 ORTHO05D006923 2.3e-185 652.5 426 78.2
Cc05_g13620 Coffea canephora HOM05D005555 ORTHO05D006923 1.5e-184 649.8 427 78.2
Solyc12g005050.2 Solanum lycopersicum HOM05D005555 ORTHO05D006923 2.5e-184 649.0 431 77.5
Gohir.A04G016500 Gossypium hirsutum HOM05D005555 ORTHO05D006923 9.5e-184 647.1 424 79.5
Nitab4.5_0008473g0010 Nicotiana tabacum HOM05D005555 ORTHO05D006923 9.5e-184 647.1 432 76.9
Cc07_g19690 Coffea canephora HOM05D005555 ORTHO05D006923 6.1e-183 644.4 427 78.0
Manes.15G071400 Manihot esculenta HOM05D005555 ORTHO05D006923 1.0e-182 643.7 426 78.9
Sopen12g001050 Solanum pennellii HOM05D005555 ORTHO05D006923 1.4e-182 643.3 431 76.8
RcHm_v2.0_Chr2g0139231 Rosa chinensis HOM05D005555 ORTHO05D006923 2.3e-182 642.5 424 77.4
TAR627G0887 Trochodendron aralioides HOM05D005555 ORTHO05D006923 4.0e-182 641.7 426 77.0
Actinidia35345 Actinidia chinensis HOM05D005555 ORTHO05D006923 1.2e-181 640.2 426 77.9
Thecc.07G035900 Theobroma cacao HOM05D005555 ORTHO05D006923 9.8e-181 637.1 424 79.5
Cpa.g.sc12.303 Carica papaya HOM05D005555 ORTHO05D006923 1.3e-180 636.7 426 77.5
Gohir.D05G369700 Gossypium hirsutum HOM05D005555 ORTHO05D006923 2.2e-180 636.0 424 77.8
PGSC0003DMG400027869 Solanum tuberosum HOM05D005555 ORTHO05D006923 2.2e-180 636.0 431 75.9
CsaV3_7G021840 Cucumis sativus L. HOM05D005555 ORTHO05D006923 8.3e-180 634.0 428 76.2
Sed0005603 Sechium edule HOM05D005555 ORTHO05D006923 1.4e-179 633.3 424 76.9
Lj6g0008930 Lotus japonicus HOM05D005555 ORTHO05D006923 9.2e-179 630.6 433 73.7
unitig_744.g24404 Utricularia gibba HOM05D005555 ORTHO05D006923 9.2e-179 630.6 430 76.3
Ciclev10008353m.g Citrus clementina HOM05D005555 ORTHO05D006923 4.6e-178 628.2 428 77.8
Lalb_Chr20g0113831 Lupinus albus HOM05D005555 ORTHO05D006923 1.3e-177 626.7 433 74.8
FAN14G2902 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.7e-177 626.3 424 76.2
Rhsim06G0217300 Rhododendron simsii HOM05D005555 ORTHO05D006923 1.7e-177 626.3 442 73.3
CANSAT11G1088 Cannabis sativa HOM05D005555 ORTHO05D006923 3.9e-177 625.2 425 76.5
THA.LOC104817858 Tarenaya hassleriana HOM05D005555 ORTHO05D006923 3.9e-177 625.2 425 76.7
CSS0038584 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 3.3e-176 622.1 431 75.4
FAN05G3309 Fragaria x ananassa HOM05D005555 ORTHO05D006923 3.6e-175 618.6 424 75.7
Nn1g07133 Nelumbo nucifera HOM05D005555 ORTHO05D006923 8.0e-175 617.5 431 72.9
Lj8C169T24 Lonicera japonica HOM05D005555 ORTHO05D006923 1.4e-174 616.7 465 71.8
CiPaw.11G190000 Carya illinoinensis HOM05D005555 ORTHO05D006923 8.9e-174 614.0 426 75.4
arahy.Tifrunner.gnm1.ann1.UR7PB1 Arachis hypogaea HOM05D005555 ORTHO05D006923 1.2e-173 613.6 434 73.7
CiPaw.12G130100 Carya illinoinensis HOM05D005555 ORTHO05D006923 1.2e-173 613.6 424 75.0
CAN.G542.3 Capsicum annuum HOM05D005555 ORTHO05D006923 4.4e-173 611.7 431 73.5
Hund15555 Selenicereus undatus HOM05D005555 ORTHO05D006923 4.4e-173 611.7 427 72.8
arahy.Tifrunner.gnm1.ann1.P3VUIG Arachis hypogaea HOM05D005555 ORTHO05D006923 7.5e-173 610.9 436 73.4
Sp1g37550 Schrenkiella parvula HOM05D005555 ORTHO05D006923 9.8e-173 610.5 429 76.5
ECA240G0357 Erigeron canadensis HOM05D005555 ORTHO05D006923 1.3e-172 610.1 424 74.1
Gorai.009G438500 Gossypium raimondii HOM05D005555 ORTHO05D006923 1.3e-172 610.1 424 76.2
A06p02920 Brassica napus HOM05D005555 ORTHO05D006923 2.2e-172 609.4 421 76.5
BraA06t23497Z Brassica rapa HOM05D005555 ORTHO05D006923 2.2e-172 609.4 421 76.5
VMungo0540G1244 Vigna mungo HOM05D005555 ORTHO05D006923 2.2e-172 609.4 434 72.4
Aqoxy1G02148 Aquilegia oxysepala HOM05D005555 ORTHO05D006923 3.7e-172 608.6 420 73.6
BcaC08g43248 Brassica carinata HOM05D005555 ORTHO05D006923 3.7e-172 608.6 421 76.2
C06p05960 Brassica napus HOM05D005555 ORTHO05D006923 3.7e-172 608.6 421 76.2
BolC6t35709H Brassica oleracea HOM05D005555 ORTHO05D006923 3.7e-172 608.6 421 76.2
Prupe.3G065100 Prunus persica HOM05D005555 ORTHO05D006923 3.7e-172 608.6 418 76.6
TPR.G33802 Trifolium pratense HOM05D005555 ORTHO05D006923 6.4e-172 607.8 443 72.0
MD17G1190200 Malus domestica HOM05D005555 ORTHO05D006923 1.1e-171 607.1 424 75.0
PGR031G0129 Punica granatum HOM05D005555 ORTHO05D006923 4.1e-171 605.1 424 75.7
BcaC08g43250 Brassica carinata HOM05D005555 ORTHO05D006923 5.4e-171 604.7 421 75.5
Aa31LG10G3630 Aethionema arabicum HOM05D005555 ORTHO05D006923 7.0e-171 604.4 425 75.5
Thhalv10011513m.g Eutrema salsugineum HOM05D005555 ORTHO05D006923 7.0e-171 604.4 421 76.7
arahy.Tifrunner.gnm1.ann1.QY89IE Arachis hypogaea HOM05D005555 ORTHO05D006923 4.6e-170 601.7 435 72.9
DCAR_016709 Daucus carota HOM05D005555 ORTHO05D006923 6.0e-170 601.3 424 75.0
Psat5g178680 Pisum sativum HOM05D005555 ORTHO05D006923 7.8e-170 600.9 431 71.9
Potri.011G090800 Populus trichocarpa HOM05D005555 ORTHO05D006923 1.3e-169 600.1 424 75.5
Nitab4.5_0000981g0050 Nicotiana tabacum HOM05D005555 ORTHO05D006923 1.7e-169 599.7 471 69.0
AL1G58400 Arabidopsis lyrata HOM05D005555 ORTHO05D006923 3.9e-169 598.6 421 74.6
PSO541G4760 Papaver somniferum HOM05D005555 ORTHO05D006923 8.6e-169 597.4 427 72.4
Carub.0001s3974 Capsella rubella HOM05D005555 ORTHO05D006923 1.1e-168 597.0 421 74.6
Phvul.006G044000 Phaseolus vulgaris HOM05D005555 ORTHO05D006923 1.9e-168 596.3 434 71.2
AT1G50710 Arabidopsis thaliana HOM05D005555 ORTHO05D006923 5.6e-168 594.7 421 74.1
Glyma.08G316800 Glycine max HOM05D005555 ORTHO05D006923 9.5e-168 594.0 434 70.3
Glyma.18G096300 Glycine max HOM05D005555 ORTHO05D006923 1.6e-167 593.2 433 70.2
Medtr3g052180 Medicago truncatula HOM05D005555 ORTHO05D006923 2.8e-167 592.4 429 71.8
ClCG09G010820 Citrullus lanatus HOM05D005555 ORTHO05D006923 1.8e-166 589.7 467 68.7
EL10Ac2g03146 Beta vulgaris HOM05D005555 ORTHO05D006923 2.3e-166 589.3 449 69.5
BcaB02g11175 Brassica carinata HOM05D005555 ORTHO05D006923 2.3e-166 589.3 421 74.3
Ah.10g032310 Amaranthus hybridus HOM05D005555 ORTHO05D006923 3.1e-166 589.0 431 70.8
Sc03g0008570 Simmondsia chinensis HOM05D005555 ORTHO05D006923 3.4e-165 585.5 386 76.7
CARHR040810 Cardamine hirsuta HOM05D005555 ORTHO05D006923 7.5e-165 584.3 421 73.4
Medtr5g049170 Medicago truncatula HOM05D005555 ORTHO05D006923 4.9e-164 581.6 429 70.6
MELO3C013162.2 Cucumis melo HOM05D005555 ORTHO05D006923 6.4e-164 581.3 435 71.7
Atru.chr2.3417 Acer truncatum HOM05D005555 ORTHO05D006923 2.4e-163 579.3 423 73.0
Peaxi162Scf00660g00816 Petunia axillaris HOM05D005555 ORTHO05D006923 2.4e-163 579.3 388 77.6
PSO675G4173 Papaver somniferum HOM05D005555 ORTHO05D006923 5.4e-163 578.2 427 70.3
FAN02G4472 Fragaria x ananassa HOM05D005555 ORTHO05D006923 1.2e-162 577.0 424 71.0
DCAR_001508 Daucus carota HOM05D005555 ORTHO05D006923 2.1e-162 576.2 422 73.7
Nn1g03520 Nelumbo nucifera HOM05D005555 ORTHO05D006923 2.7e-162 575.9 431 68.2
Lsat_1_v5_gn_2_47780 Lactuca sativa HOM05D005555 ORTHO05D006923 3.5e-162 575.5 429 71.6
CSS0007038 Camellia sinensis var. sinensis HOM05D005555 ORTHO05D006923 6.0e-162 574.7 442 69.7
BraA05t20906Z Brassica rapa HOM05D005555 ORTHO05D006923 7.8e-162 574.3 416 74.0
HanXRQChr03g0076481 Helianthus annuus HOM05D005555 ORTHO05D006923 5.1e-161 571.6 409 72.9
A05p19990 Brassica napus HOM05D005555 ORTHO05D006923 2.5e-160 569.3 416 74.0
arahy.Tifrunner.gnm1.ann1.GVQ212 Arachis hypogaea HOM05D005555 ORTHO05D006923 8.1e-159 564.3 469 65.7
CDE04G3207 Ceratophyllum demersum HOM05D005555 ORTHO05D006923 5.2e-158 561.6 432 66.7
MD09G1208700 Malus domestica HOM05D005555 ORTHO05D006923 1.2e-157 560.5 411 72.5
MD03G1200100 Malus domestica HOM05D005555 ORTHO05D006923 9.9e-157 557.4 425 68.7
Sabra11G0086200 Salix brachista HOM05D005555 ORTHO05D006923 1.4e-155 553.5 424 71.5
MBI05_g12021_MAGBIO Magnolia biondii HOM05D005555 ORTHO05D006923 1.3e-153 547.0 435 69.0
Ca_14731_v3 Cicer arietinum L. HOM05D005555 ORTHO05D006923 1.5e-152 543.5 513 59.3
BcaB07g33510 Brassica carinata HOM05D005555 ORTHO05D006923 2.5e-152 542.7 435 68.7
ATR0752G192 Amborella trichopoda HOM05D005555 ORTHO05D006923 1.2e-149 533.9 434 65.9
vmacro11723 Vaccinium macrocarpon HOM05D005555 ORTHO05D006923 2.4e-147 526.2 518 58.7
HanXRQChr05g0134351 Helianthus annuus HOM05D005555 ORTHO05D006923 9.3e-147 524.2 429 66.9
Dinv40759 Davidia involucrata HOM05D005555 ORTHO05D006923 1.3e-145 520.4 387 74.4
AUR62018195 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.6e-143 513.5 435 64.6
Haze_09680 Corylus avellana HOM05D005555 ORTHO05D006923 7.6e-141 504.6 495 60.0
HPP92_010410 Vanilla planifolia HOM05D005555 ORTHO05D006923 1.1e-139 500.7 423 64.5
Cfa020338 Carpinus fangiana HOM05D005555 ORTHO05D006923 4.2e-139 498.8 378 71.7
RcHm_v2.0_Chr5g0039771 Rosa chinensis HOM05D005555 ORTHO05D006923 5.4e-139 498.4 421 61.8
Gohir.D05G369900 Gossypium hirsutum HOM05D005555 ORTHO05D006923 6.0e-138 495.0 424 65.8
Gohir.D05G370300 Gossypium hirsutum HOM05D005555 ORTHO05D006923 1.3e-135 487.3 376 71.8
FvH4_3g22760 Fragaria vesca HOM05D005555 ORTHO05D006923 1.0e-132 477.6 418 60.5
FvH4_6g31880 Fragaria vesca HOM05D005555 ORTHO05D006923 9.3e-131 471.1 322 76.1
Prupe.4G214200 Prunus persica HOM05D005555 ORTHO05D006923 3.9e-129 465.7 369 65.6
Zm00001eb230170 Zea mays HOM05D005555 ORTHO05D006923 4.3e-128 462.2 423 61.7
Sed0020027 Sechium edule HOM05D005555 ORTHO05D006923 2.0e-125 453.4 391 64.7
Mapoly0032s0110 Marchantia polymorpha HOM05D005555 ORTHO05D006923 3.4e-125 452.6 436 56.9
SMO352G0045 Selaginella moellendorffii HOM05D005555 ORTHO05D006923 5.8e-125 451.8 415 59.3
TPR.G5778 Trifolium pratense HOM05D005555 ORTHO05D006923 6.7e-121 438.3 344 67.4
FAN16G3656 Fragaria x ananassa HOM05D005555 ORTHO05D006923 4.3e-120 435.6 399 58.6
arahy.Tifrunner.gnm1.ann1.92YVPD Arachis hypogaea HOM05D005555 ORTHO05D006923 1.2e-117 427.6 425 56.9
Pp3c17_11280 Physcomitrium patens HOM05D005555 ORTHO05D006923 8.5e-116 421.4 423 55.8
AUR62038682 Chenopodium quinoa HOM05D005555 ORTHO05D006923 1.4e-113 414.1 433 56.1
arahy.Tifrunner.gnm1.ann1.21WID0 Arachis hypogaea HOM05D005555 ORTHO05D006923 2.5e-107 393.3 433 52.2
FAN25G0297 Fragaria x ananassa HOM05D005555 ORTHO05D006923 9.7e-104 381.3 355 58.3
Medtr5g049150 Medicago truncatula HOM05D005555 ORTHO05D006923 4.9e-71 272.7 221 65.6
CBR_g19746 Chara braunii HOM05D005555 ORTHO05D006923 7.0e-62 242.3 385 37.1
CBR_g6714 Chara braunii HOM05D005555 ORTHO05D006923 1.4e-54 218.0 423 35.5
Os02g0119100 Oryza sativa ssp. japonica HOM05D005555 ORTHO05D006923 1.3e-39 168.3 204 52.9
TPR.G5733 Trifolium pratense HOM05D005555 ORTHO05D006923 6.6e-28 129.4 84 76.2
Hma1.2p1_0206F.1_g087650 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.1e-17 95.5 46 95.7
Hma1.2p1_0545F.1_g176020 Hydrangea macrophylla HOM05D005555 ORTHO05D006923 1.1e-17 95.5 46 95.7
Lsat_1_v5_gn_9_94361 Lactuca sativa HOM05D005555 ORTHO05D006923 1.5e-16 91.7 55 78.2
Actinidia13832 Actinidia chinensis HOM05D005555 ORTHO05D006923 4.5e-08 63.5 53 66.0


User provided reference genes

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