Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 1.4e-196 689.5 360 100.0
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 5.9e-139 498.0 360 73.1
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.0e-135 487.3 375 68.0
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.0e-115 419.9 357 64.7
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 2.7e-115 419.5 357 65.3
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 1.0e-114 417.5 359 61.8
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 1.0e-114 417.5 357 63.3
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 6.6e-114 414.8 357 63.0
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 8.6e-114 414.5 359 60.2
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 2.5e-113 412.9 357 61.3
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 3.3e-113 412.5 357 62.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 2.8e-112 409.5 357 61.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 6.1e-112 408.3 357 61.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 8.0e-112 407.9 353 61.8
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 8.9e-111 404.4 357 61.6
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 2.0e-110 403.3 356 60.4
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 3.4e-110 402.5 362 61.0
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 9.8e-110 401.0 353 61.5
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.3e-109 400.6 344 62.2
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 1.3e-109 400.6 300 66.3
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 6.3e-109 398.3 305 65.6
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 1.8e-108 396.7 307 66.4
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 1.8e-108 396.7 354 61.9
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 7.0e-108 394.8 312 64.7
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 9.2e-108 394.4 358 58.9
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.6e-107 393.7 353 61.2
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 2.0e-107 393.3 307 65.1
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 2.7e-107 392.9 357 61.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 3.5e-107 392.5 353 60.6
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 1.0e-106 391.0 357 60.8
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.0e-106 391.0 303 64.7
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 2.9e-106 389.4 347 60.8
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 2.9e-106 389.4 330 61.5
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 2.9e-106 389.4 350 60.3
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 5.0e-106 388.7 357 60.5
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 6.6e-106 388.3 314 65.0
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 8.6e-106 387.9 352 59.7
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 3.3e-105 386.0 358 59.5
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 1.2e-104 384.0 353 58.9
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 2.1e-104 383.3 353 58.4
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 2.8e-104 382.9 315 61.6
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 3.1e-103 379.4 330 60.0
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.5e-102 377.1 350 58.0
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 3.4e-102 375.9 358 57.8
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 7.5e-102 374.8 354 59.0
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 9.8e-102 374.4 362 56.9
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 1.3e-101 374.0 358 54.5
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 1.7e-101 373.6 346 58.1
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.2e-101 373.2 357 58.0
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 4.9e-101 372.1 345 58.6
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 6.4e-101 371.7 338 57.1
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 6.4e-101 371.7 357 57.1
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 6.4e-101 371.7 357 56.9
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 8.3e-101 371.3 347 57.1
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 1.4e-100 370.5 353 57.2
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.9e-100 370.2 338 56.8
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 5.4e-100 368.6 353 55.2
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 5.4e-100 368.6 311 61.7
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 7.0e-100 368.2 357 56.9
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 7.0e-100 368.2 357 56.9
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 7.0e-100 368.2 357 56.9
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 7.0e-100 368.2 357 56.9
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 7.0e-100 368.2 355 56.6
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 9.2e-100 367.9 336 56.5
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 1.2e-99 367.5 358 56.4
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 1.6e-99 367.1 359 57.7
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 2.0e-99 366.7 354 57.9
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 3.5e-99 365.9 355 56.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 6.6e-98 361.7 268 66.8
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 8.6e-98 361.3 350 56.0
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 2.5e-97 359.8 349 55.6
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 4.3e-97 359.0 347 54.8
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 7.3e-97 358.2 306 59.8
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 7.3e-97 358.2 355 57.5
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 1.2e-96 357.5 306 58.8
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 3.6e-96 355.9 355 55.5
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 3.6e-96 355.9 350 55.7
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 4.7e-96 355.5 353 55.0
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 3.1e-95 352.8 359 52.9
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 4.0e-95 352.4 355 54.9
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 5.8e-94 348.6 355 56.3
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 5.8e-94 348.6 303 59.7
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 2.9e-93 346.3 355 55.8
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 4.9e-93 345.5 302 60.3
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.6e-91 340.5 326 55.5
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 4.3e-89 332.4 265 62.3
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 2.8e-88 329.7 270 62.2
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 3.6e-88 329.3 328 53.4
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.4e-87 327.4 297 58.6
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 2.6e-86 323.2 407 47.4
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 5.1e-82 308.9 282 56.0
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 7.6e-78 295.0 280 55.7
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.0e-74 284.6 341 47.5
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.5e-73 280.0 403 43.2
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 2.1e-72 276.9 343 46.1
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 6.2e-72 275.4 312 51.0
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 1.4e-71 274.2 341 45.7
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 1.6e-59 234.2 264 49.6
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 1.1e-57 228.0 382 38.7
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.1e-55 219.9 180 61.7
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.0e-53 214.9 261 46.7
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 7.4e-49 198.7 220 51.8
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 3.5e-43 179.9 133 64.7
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 7.4e-41 172.2 188 52.1
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 6.1e-35 152.5 130 59.2
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 1.8e-34 151.0 130 58.5
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 2.3e-34 150.6 185 47.6
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 5.1e-34 149.4 130 58.5
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 1.7e-29 134.4 172 47.7
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 6.5e-29 132.5 171 48.5
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.5e-22 110.2 92 63.0
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 5.9e-22 109.4 90 63.3
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 9.4e-20 102.1 254 33.1
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 1.2e-19 101.7 208 30.8
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 4.2e-12 76.6 119 39.5
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 3.4e-09 67.0 56 60.7
Cre01.g054650 Chlamydomonas reinhardtii HOM05D006843 ORTHO05D008517 1.1e-07 62.0 101 39.6
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 9.1e-07 58.9 61 47.5


User provided reference genes

Program Settings