Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01650 Erythranthe guttata HOM05D004836 ORTHO05D005150 0.0e+00 2785.0 1628 100.0
SGA_v2.0_scaffold168G38564 Striga asiatica HOM05D004836 ORTHO05D005150 4.2e-277 959.1 1749 43.0
SGA_v2.0_scaffold171G38861 Striga asiatica HOM05D004836 ORTHO05D005150 1.6e-271 940.6 1867 40.2
Oeu014362.2 Olea europaea HOM05D004836 ORTHO05D005150 1.2e-234 818.1 1916 37.5
Dinv10337 Davidia involucrata HOM05D004836 ORTHO05D005150 5.1e-182 643.3 1784 35.8
Dinv40862 Davidia involucrata HOM05D004836 ORTHO05D005150 5.5e-176 623.2 1666 35.4
Oeu046935.1 Olea europaea HOM05D004836 ORTHO05D005150 1.2e-170 605.5 1870 33.7
Actinidia37154 Actinidia chinensis HOM05D004836 ORTHO05D005150 7.7e-146 523.1 1713 34.3
CSS0029600 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 3.0e-134 484.6 1624 32.6
Rhsim06G0230000 Rhododendron simsii HOM05D004836 ORTHO05D005150 3.5e-130 471.1 1782 31.9
Actinidia05002 Actinidia chinensis HOM05D004836 ORTHO05D005150 8.6e-129 466.5 1775 31.4
GSVIVG01014692001 Vitis vinifera HOM05D004836 ORTHO05D005150 2.0e-125 455.3 1927 30.5
PGSC0003DMG400022276 Solanum tuberosum HOM05D004836 ORTHO05D005150 1.3e-124 452.6 847 42.9
Nitab4.5_0007415g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 2.9e-124 451.4 837 43.4
Nitab4.5_0002736g0020 Nicotiana tabacum HOM05D004836 ORTHO05D005150 8.1e-119 433.3 899 42.5
CAN.G623.12 Capsicum annuum HOM05D004836 ORTHO05D005150 1.4e-118 432.6 841 42.6
Sopen07g033810 Solanum pennellii HOM05D004836 ORTHO05D005150 1.7e-113 415.6 843 41.0
Solyc07g065600.3 Solanum lycopersicum HOM05D004836 ORTHO05D005150 8.6e-113 413.3 843 41.0
TAR626G1210 Trochodendron aralioides HOM05D004836 ORTHO05D005150 4.1e-107 394.4 1797 30.0
Cc05_g14960 Coffea canephora HOM05D004836 ORTHO05D005150 2.1e-106 392.1 1728 30.8
Peaxi162Scf00139g01321 Petunia axillaris HOM05D004836 ORTHO05D005150 1.2e-101 376.3 1849 29.4
Potri.001G368200 Populus trichocarpa HOM05D004836 ORTHO05D005150 3.2e-91 341.7 1743 29.1
TAR624G0729 Trochodendron aralioides HOM05D004836 ORTHO05D005150 2.7e-90 338.6 1744 28.4
CSS0003147 Camellia sinensis var. sinensis HOM05D004836 ORTHO05D005150 6.2e-87 327.4 359 50.7
CiPaw.11G204300 Carya illinoinensis HOM05D004836 ORTHO05D005150 8.1e-87 327.0 1953 28.6
Rhsim04G0012500 Rhododendron simsii HOM05D004836 ORTHO05D005150 1.1e-86 326.6 1444 28.3
Haze_09829 Corylus avellana HOM05D004836 ORTHO05D005150 2.6e-85 322.0 1949 27.3
TWI38G0981 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 4.5e-85 321.2 1721 29.2
Prupe.7G022200 Prunus persica HOM05D004836 ORTHO05D005150 7.1e-83 313.9 1766 29.0
Gorai.002G100500 Gossypium raimondii HOM05D004836 ORTHO05D005150 1.8e-78 299.3 848 37.1
QL08p004015 Quercus lobata HOM05D004836 ORTHO05D005150 1.8e-78 299.3 1844 28.3
Sc16g0008100 Simmondsia chinensis HOM05D004836 ORTHO05D005150 2.4e-78 298.9 1878 28.3
Gohir.D01G061900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.5e-77 296.2 763 35.4
Thecc.07G013200 Theobroma cacao HOM05D004836 ORTHO05D005150 4.5e-77 294.7 1896 27.6
FAN10G2990 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.3e-76 293.1 906 34.0
Gohir.A01G091700 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.3e-76 293.1 788 35.2
Prupe.5G032900 Prunus persica HOM05D004836 ORTHO05D005150 1.7e-76 292.7 1775 27.8
Manes.03G141700 Manihot esculenta HOM05D004836 ORTHO05D005150 1.9e-75 289.3 1717 28.1
DCAR_013235 Daucus carota HOM05D004836 ORTHO05D005150 2.5e-75 288.9 1877 26.7
HanXRQChr13g0408421 Helianthus annuus HOM05D004836 ORTHO05D005150 1.6e-74 286.2 1696 26.9
RcHm_v2.0_Chr1g0333641 Rosa chinensis HOM05D004836 ORTHO05D005150 3.9e-73 281.6 1823 27.0
Sabra16G0241300 Salix brachista HOM05D004836 ORTHO05D005150 6.7e-73 280.8 1264 30.8
Ciclev10007227m.g Citrus clementina HOM05D004836 ORTHO05D005150 2.1e-71 275.8 945 35.4
Atru.chr2.3693 Acer truncatum HOM05D004836 ORTHO05D005150 1.4e-70 273.1 1733 27.0
FvH4_7g06090 Fragaria vesca HOM05D004836 ORTHO05D005150 9.0e-70 270.4 915 32.3
Sc03g0011330 Simmondsia chinensis HOM05D004836 ORTHO05D005150 9.0e-70 270.4 852 33.1
FAN06G1091 Fragaria x ananassa HOM05D004836 ORTHO05D005150 7.6e-69 267.3 898 32.9
MD11G1029700 Malus domestica HOM05D004836 ORTHO05D005150 1.1e-67 263.5 1964 27.3
FAN01G1635 Fragaria x ananassa HOM05D004836 ORTHO05D005150 1.9e-67 262.7 899 33.0
Sc03g0011420 Simmondsia chinensis HOM05D004836 ORTHO05D005150 7.9e-66 257.3 1859 25.6
FAN03G2987 Fragaria x ananassa HOM05D004836 ORTHO05D005150 2.3e-65 255.8 914 33.5
Lsat_1_v5_gn_9_90560 Lactuca sativa HOM05D004836 ORTHO05D005150 3.0e-65 255.4 1715 26.5
MD03G1024600 Malus domestica HOM05D004836 ORTHO05D005150 3.9e-65 255.0 1911 25.9
Duzib213G0869 Durio zibethinus HOM05D004836 ORTHO05D005150 6.7e-65 254.2 1955 26.1
Manes.15G059500 Manihot esculenta HOM05D004836 ORTHO05D005150 3.3e-64 251.9 1665 26.8
CANSAT11G1576 Cannabis sativa HOM05D004836 ORTHO05D005150 5.7e-64 251.1 635 40.2
HanXRQChr03g0074011 Helianthus annuus HOM05D004836 ORTHO05D005150 6.3e-63 247.7 1413 28.0
Eucgr.F02046 Eucalyptus grandis HOM05D004836 ORTHO05D005150 1.1e-62 246.9 1734 26.1
Nn1g03169 Nelumbo nucifera HOM05D004836 ORTHO05D005150 2.4e-62 245.7 1840 27.0
ECA240G1942 Erigeron canadensis HOM05D004836 ORTHO05D000368 3.4e-61 241.9 652 33.0
CANSAT35G0529 Cannabis sativa HOM05D004836 ORTHO05D005150 1.0e-60 240.4 1666 25.3
PGR083G2228 Punica granatum HOM05D004836 ORTHO05D005150 5.0e-60 238.0 1764 25.8
Glyma.10G277400 Glycine max HOM05D004836 ORTHO05D005150 1.9e-59 236.1 840 35.4
CsaV3_7G011380 Cucumis sativus L. HOM05D004836 ORTHO05D005150 9.4e-59 233.8 652 38.7
Gohir.D13G135900 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.6e-58 233.0 799 34.4
TWI39G0854 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 2.2e-55 222.6 487 44.4
Phvul.007G023800 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 9.1e-54 217.2 861 33.9
vmacro11592 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 9.1e-54 217.2 505 33.1
MBI15_g03895_MAGBIO Magnolia biondii HOM05D004836 ORTHO05D005150 1.5e-53 216.5 1701 25.9
Gorai.013G152400 Gossypium raimondii HOM05D004836 ORTHO05D005150 4.5e-53 214.9 1892 25.7
EL10Ac4g07562 Beta vulgaris HOM05D004836 ORTHO05D005150 1.0e-52 213.8 674 37.2
Sed0002835 Sechium edule HOM05D004836 ORTHO05D005150 1.0e-52 213.8 694 36.9
ClCG09G021380 Citrullus lanatus HOM05D004836 ORTHO05D005150 3.2e-51 208.8 668 37.6
COL.COLO4_09837 Corchorus olitorius HOM05D004836 ORTHO05D005150 2.1e-50 206.1 1696 24.1
MELO3C024947.2 Cucumis melo HOM05D004836 ORTHO05D005150 6.1e-50 204.5 680 38.5
AUR62017108 Chenopodium quinoa HOM05D004836 ORTHO05D005150 7.9e-50 204.1 1716 29.1
Hund23108 Selenicereus undatus HOM05D004836 ORTHO05D005150 1.1e-48 200.3 859 31.3
Cpa.g.sc12.114 Carica papaya HOM05D004836 ORTHO05D005150 2.6e-48 199.1 635 32.8
Glyma.20G112200 Glycine max HOM05D004836 ORTHO05D005150 4.4e-48 198.4 1854 26.2
MD00G1168400 Malus domestica HOM05D004836 ORTHO05D005150 1.7e-47 196.4 535 40.9
Gohir.A13G132500 Gossypium hirsutum HOM05D004836 ORTHO05D005150 1.1e-46 193.7 1816 25.2
Lj1A890T52 Lonicera japonica HOM05D004836 ORTHO05D005150 2.4e-46 192.6 696 32.2
Lj5g0000015 Lotus japonicus HOM05D004836 ORTHO05D005150 4.1e-46 191.8 1863 24.9
AUR62036461 Chenopodium quinoa HOM05D004836 ORTHO05D005150 3.8e-44 185.3 1725 27.7
Carub.0008s1617 Capsella rubella HOM05D004836 ORTHO05D005150 7.2e-43 181.0 1776 27.3
Sed0003689 Sechium edule HOM05D004836 ORTHO05D005150 7.2e-43 181.0 713 33.8
arahy.Tifrunner.gnm1.ann1.D5NCPP Arachis hypogaea HOM05D004836 ORTHO05D005150 9.4e-43 180.6 413 35.4
Aqoxy4G02292 Aquilegia oxysepala HOM05D004836 ORTHO05D005150 1.6e-42 179.9 684 34.2
THA.LOC104811669 Tarenaya hassleriana HOM05D004836 ORTHO05D005150 1.6e-42 179.9 737 34.6
Hund20644 Selenicereus undatus HOM05D004836 ORTHO05D005150 4.7e-42 178.3 1809 25.0
Ah.06g181450 Amaranthus hybridus HOM05D004836 ORTHO05D005150 6.1e-42 177.9 1733 24.1
Hma1.2p1_1109F.1_g258180 Hydrangea macrophylla HOM05D004836 ORTHO05D005150 4.0e-41 175.3 300 37.0
Phvul.003G265300 Phaseolus vulgaris HOM05D004836 ORTHO05D005150 1.3e-39 170.2 1733 26.0
Lalb_Chr06g0166281 Lupinus albus HOM05D004836 ORTHO05D005150 8.2e-39 167.5 1724 25.2
CARHR269190 Cardamine hirsuta HOM05D004836 ORTHO05D005150 1.1e-38 167.2 757 34.3
Ca_25650_v3 Cicer arietinum L. HOM05D004836 ORTHO05D005150 7.0e-38 164.5 1767 24.9
CDE04G0223 Ceratophyllum demersum HOM05D000588 ORTHO05D005150 9.1e-38 164.1 836 31.7
VMungo0720G3177 Vigna mungo HOM05D004836 ORTHO05D005150 4.5e-37 161.8 1729 25.2
Lalb_Chr21g0309081 Lupinus albus HOM05D004836 ORTHO05D005150 1.7e-36 159.8 1796 25.2
Aa31LG3G11720 Aethionema arabicum HOM05D004836 ORTHO05D005150 1.5e-35 156.8 728 33.4
Sp6g17700 Schrenkiella parvula HOM05D004836 ORTHO05D005150 4.2e-35 155.2 690 33.0
Medtr1g111660 Medicago truncatula HOM05D004836 ORTHO05D005150 2.1e-34 152.9 1794 23.7
vmacro11593 Vaccinium macrocarpon HOM05D004836 ORTHO05D005150 2.1e-34 152.9 257 56.8
MD11G1030200 Malus domestica HOM05D004836 ORTHO05D005150 4.7e-34 151.8 477 40.9
ATR0751G141 Amborella trichopoda HOM05D004836 ORTHO05D005150 1.8e-30 139.8 695 32.4
AUR62006337 Chenopodium quinoa HOM05D004836 ORTHO05D005150 3.1e-30 139.0 746 27.1
arahy.Tifrunner.gnm1.ann1.LI7RG4 Arachis hypogaea HOM05D004836 ORTHO05D005150 7.7e-29 134.4 1773 24.8
AL8G31380 Arabidopsis lyrata HOM05D004836 ORTHO05D005150 1.6e-26 126.7 1800 26.3
Thhalv10012421m.g Eutrema salsugineum HOM05D004836 ORTHO05D005150 4.0e-25 122.1 697 31.1
unitig_22.g5946 Utricularia gibba HOM05D004836 ORTHO05D005150 2.6e-24 119.4 613 31.6
AT5G55820 Arabidopsis thaliana HOM05D004836 ORTHO05D005150 5.7e-24 118.2 1849 24.7
Actinidia30399 Actinidia chinensis HOM05D004836 ORTHO05D005150 9.8e-24 117.5 110 54.5
TPR.G26309 Trifolium pratense HOM05D004836 ORTHO05D005150 6.3e-23 114.8 1510 23.4
C03p16240 Brassica napus HOM05D004836 ORTHO05D005150 1.8e-22 113.2 738 30.9
BolC3t14046H Brassica oleracea HOM05D004836 ORTHO05D005150 3.5e-21 109.0 671 31.0
TWI39G0173 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 6.6e-20 104.8 164 41.5
HPP92_018201 Vanilla planifolia HOM05D004836 ORTHO05D005150 4.3e-19 102.1 643 26.3
Actinidia30401 Actinidia chinensis HOM05D004836 ORTHO05D005150 2.1e-18 99.8 67 76.1
BraA03t10683Z Brassica rapa HOM05D004836 ORTHO05D005150 2.8e-18 99.4 672 30.8
A03p13800 Brassica napus HOM05D004836 ORTHO05D005150 1.0e-17 97.4 672 30.8
Psat6g230520 Pisum sativum HOM05D004836 ORTHO05D005150 2.3e-17 96.3 1757 23.8
Os09g0477700 Oryza sativa ssp. japonica HOM05D028105 ORTHO05D005150 2.6e-16 92.8 569 26.4
AUR62044127 Chenopodium quinoa HOM05D004836 ORTHO05D005150 9.8e-16 90.9 287 53.3
BcaC01g06394 Brassica carinata HOM05D004836 ORTHO05D005150 2.2e-15 89.7 80 51.2
BcaB08g35940 Brassica carinata HOM05D004836 ORTHO05D005150 4.1e-14 85.5 85 44.7
PSO541G5284 Papaver somniferum HOM05D004836 ORTHO05D005150 3.5e-13 82.4 162 35.8
TWI39G0060 Tripterygium wilfordii HOM05D004836 ORTHO05D005150 3.5e-13 82.4 352 26.7
PSO675G3612 Papaver somniferum HOM05D004836 ORTHO05D005150 1.0e-12 80.9 162 35.2
HanXRQChr03g0074021 Helianthus annuus HOM05D004836 ORTHO05D005150 3.9e-12 79.0 61 59.0
BcaB08g35941 Brassica carinata HOM05D004836 ORTHO05D005150 1.1e-11 77.4 193 32.1
TPR.G26295 Trifolium pratense HOM05D004836 ORTHO05D005150 1.1e-11 77.4 184 34.2
RhsimUnG0156400 Rhododendron simsii HOM05D000074 ORTHO05D001262 1.5e-11 77.0 57 63.2
MD03G1025800 Malus domestica HOM05D004836 ORTHO05D005150 3.3e-11 75.9 82 54.9
Zm00001eb316050 Zea mays HOM05D028105 ORTHO05D005150 4.3e-11 75.5 523 30.8
SEGI_26437 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 7.3e-11 74.7 610 25.4
Lj1A890T51 Lonicera japonica HOM05D004836 ORTHO05D005150 2.1e-10 73.2 886 23.4
ATR0712G030 Amborella trichopoda HOM05D004836 ORTHO05D005150 4.0e-09 68.9 90 46.7
SEGI_04158 Sequoiadendron giganteum HOM05D014698 ORTHO05D016532 6.8e-09 68.2 609 23.6
CDE02G2584 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 8.9e-09 67.8 56 67.9
CDE02G4444 Ceratophyllum demersum HOM05D004836 ORTHO05D005150 8.9e-09 67.8 86 45.3
arahy.Tifrunner.gnm1.ann1.TB163P Arachis hypogaea HOM05D004836 ORTHO05D005150 1.5e-08 67.0 360 24.2
Cpa.g.c38368 Carica papaya HOM05D004836 ORTHO05D005150 2.0e-08 66.6 57 54.4
ECA234G1395 Erigeron canadensis HOM05D004805 ORTHO05D005756 4.4e-08 65.5 90 42.2
BolC2t07687H Brassica oleracea HOM05D000026 ORTHO05D017167 1.7e-07 63.5 70 45.7
Pp3c1_42830 Physcomitrium patens HOM05D014698 ORTHO05D016532 2.2e-07 63.2 62 51.6
Mapoly0020s0135 Marchantia polymorpha HOM05D014698 ORTHO05D016532 1.9e-06 60.1 101 40.6
CBR_g22984 Chara braunii HOM05D014698 ORTHO05D016532 4.1e-06 58.9 62 46.8


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