Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 3.9e-207 724.5 361 100.0
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 3.8e-154 548.5 366 74.3
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 8.0e-144 514.2 366 71.0
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 4.7e-136 488.4 342 70.5
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 4.7e-136 488.4 360 67.2
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.4e-132 476.1 341 67.2
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 3.1e-132 475.7 343 68.2
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 5.4e-132 474.9 363 65.6
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 1.2e-131 473.8 353 65.2
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 7.7e-131 471.1 341 66.3
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 7.7e-131 471.1 363 63.9
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 3.8e-130 468.8 359 68.8
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 3.8e-130 468.8 358 65.9
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 6.5e-130 468.0 340 66.2
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 5.5e-129 464.9 341 65.4
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 7.2e-129 464.5 341 65.1
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 1.8e-127 459.9 331 64.7
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 2.3e-127 459.5 330 64.8
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 3.0e-127 459.1 359 63.0
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 1.2e-126 457.2 340 64.4
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 2.0e-126 456.4 370 61.9
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 1.7e-125 453.4 366 61.7
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 2.4e-124 449.5 369 61.8
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 9.2e-124 447.6 367 63.8
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.7e-123 446.0 331 64.7
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 7.7e-123 444.5 354 60.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 2.9e-122 442.6 326 66.6
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 3.8e-122 442.2 357 61.6
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 5.0e-122 441.8 366 60.4
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 4.3e-121 438.7 355 60.6
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 5.6e-121 438.3 365 61.4
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 7.3e-121 438.0 334 64.4
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.1e-120 436.4 321 66.4
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 1.0e-119 434.1 352 59.9
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 1.0e-119 434.1 363 61.4
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 2.3e-119 433.0 367 59.7
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 4.0e-119 432.2 351 61.8
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 5.2e-119 431.8 330 64.2
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 8.9e-119 431.0 328 63.1
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 8.9e-119 431.0 363 58.4
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 3.4e-118 429.1 360 60.8
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 7.5e-118 427.9 344 62.5
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 1.3e-117 427.2 358 58.9
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 1.7e-117 426.8 358 58.9
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 6.4e-117 424.9 324 63.9
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 8.3e-117 424.5 344 60.8
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 8.3e-117 424.5 359 58.2
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 1.1e-116 424.1 326 63.2
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 1.8e-116 423.3 344 61.9
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 7.0e-116 421.4 361 58.4
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 7.0e-116 421.4 363 58.4
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 1.2e-115 420.6 339 61.9
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.6e-115 420.2 379 57.0
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 7.8e-115 417.9 361 58.7
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 5.0e-114 415.2 344 59.6
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 6.6e-114 414.8 330 60.3
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 8.6e-114 414.5 362 58.6
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 8.6e-114 414.5 329 60.8
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.5e-113 412.9 338 61.5
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 5.6e-113 411.8 367 57.5
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 7.3e-113 411.4 360 57.2
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 7.3e-113 411.4 337 61.4
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 7.3e-113 411.4 368 56.2
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 9.5e-113 411.0 340 60.0
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 1.2e-112 410.6 323 62.8
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 1.6e-112 410.2 360 56.9
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 1.6e-112 410.2 335 59.7
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 2.1e-112 409.8 335 59.1
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 4.7e-112 408.7 351 59.8
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 4.7e-112 408.7 356 58.7
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 6.2e-112 408.3 334 60.2
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 6.2e-112 408.3 328 61.9
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 1.8e-111 406.8 352 59.7
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 1.5e-110 403.7 376 56.9
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 2.0e-110 403.3 305 63.3
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 3.4e-110 402.5 324 61.1
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 5.8e-110 401.7 313 61.0
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 7.5e-110 401.4 364 54.9
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 9.8e-110 401.0 355 58.3
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 9.8e-110 401.0 373 55.8
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 9.8e-110 401.0 295 62.7
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 1.3e-109 400.6 317 62.8
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 1.7e-109 400.2 332 61.1
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 6.4e-109 398.3 327 59.9
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 9.2e-108 394.4 282 66.0
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 2.7e-107 392.9 368 55.7
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 2.7e-107 392.9 303 62.7
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 6.6e-106 388.3 324 60.8
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 9.5e-105 384.4 367 57.5
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 2.8e-104 382.9 340 59.1
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 6.4e-101 371.7 283 62.5
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 3.2e-100 369.4 358 53.4
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 6.0e-99 365.2 251 67.3
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 3.1e-95 352.8 320 56.6
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 3.0e-90 336.3 258 62.8
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 3.1e-87 326.2 242 63.2
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.2e-86 324.3 281 55.2
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 9.3e-84 314.7 337 50.1
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 1.0e-82 311.2 240 65.4
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 1.5e-81 307.4 329 47.7
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 1.7e-77 293.9 248 59.7
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 4.9e-77 292.4 232 59.9
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 1.6e-75 287.3 488 38.1
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 8.7e-74 281.6 445 39.3
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 9.6e-73 278.1 335 45.7
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.7e-69 267.3 300 49.0
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.1e-68 264.6 240 57.1
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.4e-68 264.2 304 48.4
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 7.1e-68 261.9 320 46.6
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 2.3e-66 256.9 224 61.6
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 4.0e-63 246.1 211 58.8
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 8.4e-61 238.4 218 55.0
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 7.2e-52 208.8 355 36.1
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 2.5e-49 200.3 157 60.5
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 8.2e-48 195.3 372 35.5
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 7.7e-46 188.7 156 60.3
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 3.6e-43 179.9 126 65.1
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 1.8e-42 177.6 122 67.2
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 6.7e-42 175.6 347 36.0
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 4.8e-40 169.5 412 33.3
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.4e-39 167.9 170 52.4
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 5.3e-39 166.0 125 59.2
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 1.1e-36 158.3 130 60.0
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 7.2e-36 155.6 112 70.5
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 1.8e-26 124.4 85 65.9
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 2.6e-25 120.6 85 64.7
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 3.7e-24 116.7 137 48.2
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 1.6e-19 101.3 72 63.9
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 1.0e-18 98.6 59 76.3
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 2.3e-10 70.9 134 34.3
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 3.7e-08 63.5 57 57.9


User provided reference genes

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