Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01565 Erythranthe guttata HOM05D007146 ORTHO05D008971 1.3e-216 756.1 387 100.0
SalBow8G2846 Salvia bowleyana HOM05D007146 ORTHO05D008971 1.3e-136 490.3 342 73.4
SGA_v2.0_scaffold186G40227 Striga asiatica HOM05D007146 ORTHO05D008971 2.9e-136 489.2 349 72.8
Oeu002808.1 Olea europaea HOM05D007146 ORTHO05D008971 1.8e-125 453.4 341 69.8
MSTRG.16117 Avicennia marina HOM05D007146 ORTHO05D008971 7.8e-121 438.0 388 61.3
Nitab4.5_0002933g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.3e-120 437.2 340 63.8
Nitab4.5_0000313g0010 Nicotiana tabacum HOM05D007146 ORTHO05D008971 1.6e-118 430.3 340 62.9
PGSC0003DMG401022133 Solanum tuberosum HOM05D007146 ORTHO05D008971 2.1e-118 429.9 340 62.4
CSS0033590 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 3.1e-117 426.0 352 61.6
CSS0042492 Camellia sinensis var. sinensis HOM05D007146 ORTHO05D008971 3.1e-117 426.0 352 61.6
Solyc07g066340.3 Solanum lycopersicum HOM05D007146 ORTHO05D008971 1.5e-116 423.7 340 61.8
Sopen07g034520 Solanum pennellii HOM05D007146 ORTHO05D008971 6.4e-115 418.3 340 61.2
Cc05_g15970 Coffea canephora HOM05D007146 ORTHO05D008971 1.4e-114 417.2 344 60.2
Atru.chr2.1879 Acer truncatum HOM05D007146 ORTHO05D008971 2.4e-114 416.4 346 59.5
Peaxi162Scf00232g01133 Petunia axillaris HOM05D007146 ORTHO05D008971 7.0e-114 414.8 341 59.8
DCAR_009636 Daucus carota HOM05D007146 ORTHO05D008971 3.9e-112 409.1 348 59.2
Nn7g37748 Nelumbo nucifera HOM05D007146 ORTHO05D008971 1.1e-111 407.5 352 58.5
CAN.G943.29 Capsicum annuum HOM05D007146 ORTHO05D008971 1.9e-111 406.8 340 59.1
Rhsim06G0237700 Rhododendron simsii HOM05D007146 ORTHO05D008971 3.3e-111 406.0 357 58.8
vmacro11655 Vaccinium macrocarpon HOM05D007146 ORTHO05D008971 2.1e-110 403.3 374 57.8
Thhalv10007372m.g Eutrema salsugineum HOM05D007146 ORTHO05D008971 2.8e-110 402.9 349 59.3
CiPaw.11G069000 Carya illinoinensis HOM05D007146 ORTHO05D008971 2.3e-109 399.8 349 58.2
GSVIVG01020477001 Vitis vinifera HOM05D007146 ORTHO05D008971 1.2e-108 397.5 347 57.3
COL.COLO4_05069 Corchorus olitorius HOM05D007146 ORTHO05D008971 1.5e-108 397.1 356 56.5
BolC5t30209H Brassica oleracea HOM05D007146 ORTHO05D008971 3.4e-108 396.0 350 58.0
MD05G1215600 Malus domestica HOM05D007146 ORTHO05D008971 3.4e-108 396.0 347 56.5
FvH4_3g16020 Fragaria vesca HOM05D007146 ORTHO05D008971 4.4e-108 395.6 353 56.9
C05p14940 Brassica napus HOM05D007146 ORTHO05D008971 5.8e-108 395.2 349 57.6
FAN11G2635 Fragaria x ananassa HOM05D007146 ORTHO05D008971 5.8e-108 395.2 353 56.9
Prupe.4G143400 Prunus persica HOM05D007146 ORTHO05D008971 1.3e-107 394.0 346 56.1
A06p12640 Brassica napus HOM05D007146 ORTHO05D008971 1.7e-107 393.7 349 57.6
PSO675G2245 Papaver somniferum HOM05D007146 ORTHO05D008971 1.7e-107 393.7 351 59.0
PGR083G2275 Punica granatum HOM05D007146 ORTHO05D008971 2.9e-107 392.9 349 57.0
AL1G28820 Arabidopsis lyrata HOM05D007146 ORTHO05D008971 3.7e-107 392.5 346 58.1
FAN21G1125 Fragaria x ananassa HOM05D007146 ORTHO05D008971 8.3e-107 391.3 354 55.6
MBI02_g25677_MAGBIO Magnolia biondii HOM05D007146 ORTHO05D008971 8.3e-107 391.3 356 55.9
TWI38G0129 Tripterygium wilfordii HOM05D007146 ORTHO05D008971 1.1e-106 391.0 349 55.9
Aqoxy4G00043_Aqoxy4G00044 Aquilegia oxysepala HOM05D007146 ORTHO05D008971 1.4e-106 390.6 348 57.5
Aa31LG7G1140 Aethionema arabicum HOM05D007146 ORTHO05D008971 2.4e-106 389.8 350 56.6
AT1G16650 Arabidopsis thaliana HOM05D007146 ORTHO05D008971 3.2e-106 389.4 349 56.4
HanXRQChr05g0160631 Helianthus annuus HOM05D007146 ORTHO05D008971 3.2e-106 389.4 341 57.8
THA.LOC104812351 Tarenaya hassleriana HOM05D007146 ORTHO05D008971 3.2e-106 389.4 349 57.6
RcHm_v2.0_Chr5g0027001 Rosa chinensis HOM05D007146 ORTHO05D008971 7.1e-106 388.3 345 55.7
Eucgr.F01450 Eucalyptus grandis HOM05D007146 ORTHO05D008971 1.2e-105 387.5 349 57.0
BcaC05g25529 Brassica carinata HOM05D007146 ORTHO05D008971 1.6e-105 387.1 357 56.6
Manes.03G082700 Manihot esculenta HOM05D007146 ORTHO05D008971 4.6e-105 385.6 340 56.8
MELO3C010557.2 Cucumis melo HOM05D007146 ORTHO05D008971 1.7e-104 383.6 376 53.5
Carub.0001s1639 Capsella rubella HOM05D007146 ORTHO05D008971 8.6e-104 381.3 349 56.2
Gorai.004G269700 Gossypium raimondii HOM05D007146 ORTHO05D008971 1.9e-103 380.2 349 53.9
Potri.007G065300 Populus trichocarpa HOM05D007146 ORTHO05D008971 2.5e-103 379.8 350 55.4
BraA06t24425Z Brassica rapa HOM05D007146 ORTHO05D008971 4.3e-103 379.0 369 54.2
Psat1g002520 Pisum sativum HOM05D007146 ORTHO05D008971 5.6e-103 378.6 360 53.3
Gohir.D08G252900 Gossypium hirsutum HOM05D007146 ORTHO05D008971 1.6e-102 377.1 349 53.3
PSO541G2405 Papaver somniferum HOM05D007146 ORTHO05D008971 1.6e-102 377.1 352 56.0
Lj3g0000430 Lotus japonicus HOM05D007146 ORTHO05D008971 6.2e-102 375.2 358 54.2
VMungo1080G0158 Vigna mungo HOM05D007146 ORTHO05D008971 6.2e-102 375.2 358 53.9
Phvul.005G055600 Phaseolus vulgaris HOM05D007146 ORTHO05D008971 8.1e-102 374.8 358 52.5
Sabra07G0052900 Salix brachista HOM05D007146 ORTHO05D008971 8.9e-101 371.3 347 54.2
ATR1098G072 Amborella trichopoda HOM05D007146 ORTHO05D008971 1.2e-100 370.9 355 54.4
TPR.G9764 Trifolium pratense HOM05D007146 ORTHO05D008971 3.4e-100 369.4 360 53.1
Glyma.08G173200 Glycine max HOM05D007146 ORTHO05D008971 7.6e-100 368.2 358 52.8
Lalb_Chr25g0285151 Lupinus albus HOM05D007146 ORTHO05D008971 6.4e-99 365.2 365 51.0
Sed0009835 Sechium edule HOM05D007146 ORTHO05D008971 3.2e-98 362.8 340 55.6
ClCG11G016310 Citrullus lanatus HOM05D007146 ORTHO05D008971 7.1e-98 361.7 364 53.6
Medtr2g064450 Medicago truncatula HOM05D007146 ORTHO05D008971 6.0e-97 358.6 360 51.4
CsaV3_2G022170 Cucumis sativus L. HOM05D007146 ORTHO05D008971 3.9e-96 355.9 349 53.3
arahy.Tifrunner.gnm1.ann1.L14HV7 Arachis hypogaea HOM05D007146 ORTHO05D008971 6.6e-96 355.1 400 46.8
FAN25G2803 Fragaria x ananassa HOM05D007146 ORTHO05D008971 1.9e-95 353.6 324 54.6
Ah.06g187050 Amaranthus hybridus HOM05D007146 ORTHO05D008971 2.8e-94 349.7 419 45.6
arahy.Tifrunner.gnm1.ann1.5W7G8A Arachis hypogaea HOM05D007146 ORTHO05D008971 3.1e-93 346.3 361 49.0
HPP92_018693 Vanilla planifolia HOM05D007146 ORTHO05D008971 5.3e-93 345.5 350 53.1
Lsat_1_v5_gn_9_46800 Lactuca sativa HOM05D007146 ORTHO05D008971 3.8e-91 339.3 369 50.4
Os12g0610500 Oryza sativa ssp. japonica HOM05D007146 ORTHO05D008971 8.4e-91 338.2 348 50.3
Ciclev10021587m.g Citrus clementina HOM05D007146 ORTHO05D008971 9.0e-85 318.2 282 56.7
EL10Ac4g08556 Beta vulgaris HOM05D007146 ORTHO05D008971 2.6e-84 316.6 317 51.1
Thecc.07G156000 Theobroma cacao HOM05D007146 ORTHO05D008971 1.4e-82 310.8 281 55.5
unitig_749.g13702 Utricularia gibba HOM05D007146 ORTHO05D008971 2.1e-81 307.0 361 48.8
Gohir.A08G232700 Gossypium hirsutum HOM05D007146 ORTHO05D008971 4.3e-79 299.3 349 45.8
HPP92_018676 Vanilla planifolia HOM05D007146 ORTHO05D008971 1.4e-77 294.3 314 51.6
Duzib213G0540 Durio zibethinus HOM05D007146 ORTHO05D008971 2.2e-75 287.0 279 53.4
Zm00001eb135900 Zea mays HOM05D007146 ORTHO05D008971 1.1e-74 284.6 301 52.5
AUR62041925 Chenopodium quinoa HOM05D007146 ORTHO05D008971 7.1e-74 282.0 283 51.6
Pp3c1_21800 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.6e-73 280.8 329 46.5
Pp3c14_6050 Physcomitrium patens HOM05D007146 ORTHO05D008971 1.6e-70 270.8 343 44.9
Lj8C186T10 Lonicera japonica HOM05D007146 ORTHO05D008971 2.0e-60 237.3 222 56.8
Ca_03693_v3 Cicer arietinum L. HOM05D007146 ORTHO05D008971 3.4e-60 236.5 197 56.3
SMO143G0033 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 1.7e-59 234.2 332 41.3
SEGI_13316 Sequoiadendron giganteum HOM05D007146 ORTHO05D008971 5.3e-53 212.6 241 49.0
AagrBONN_evm.TU.Sc2ySwM_368.537 Anthoceros agrestis HOM05D007146 ORTHO05D008971 2.0e-47 194.1 229 47.6
Hund10273 Selenicereus undatus HOM05D007146 ORTHO05D008971 1.2e-41 174.9 123 63.4
CDE03G0405 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 1.3e-35 154.8 117 55.6
Cpa.g.sc10.30 Carica papaya HOM05D007146 ORTHO05D008971 1.8e-32 144.4 195 44.6
Sp1g14790 Schrenkiella parvula HOM05D007146 ORTHO05D008971 1.8e-32 144.4 158 52.5
CARHR017120 Cardamine hirsuta HOM05D007146 ORTHO05D008971 6.8e-32 142.5 152 53.9
Cpa.g.sc10.33 Carica papaya HOM05D007146 ORTHO05D008971 1.3e-30 138.3 95 63.2
TAR627G0841 Trochodendron aralioides HOM05D007146 ORTHO05D008971 5.3e-29 132.9 195 44.6
CDE03G0452 Ceratophyllum demersum HOM05D007146 ORTHO05D008971 3.6e-25 120.2 195 42.6
Hund10306 Selenicereus undatus HOM05D007146 ORTHO05D008971 4.0e-24 116.7 144 47.9
SMO246G0022 Selaginella moellendorffii HOM05D007146 ORTHO05D008971 2.9e-11 73.9 88 47.7


User provided reference genes

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