Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 1.8e-66 255.8 128 100.0
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 3.8e-56 221.5 127 83.5
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 1.4e-55 219.5 124 85.5
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 5.5e-55 217.6 128 83.6
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 1.6e-54 216.1 127 80.3
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 2.1e-54 215.7 128 82.8
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 4.6e-54 214.5 128 82.0
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 4.6e-54 214.5 127 80.3
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 6.0e-54 214.2 128 82.0
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 7.9e-54 213.8 128 79.7
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 1.0e-53 213.4 127 81.1
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 1.3e-53 213.0 128 79.7
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 1.8e-53 212.6 128 79.7
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 3.0e-53 211.8 128 78.9
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 3.9e-53 211.5 125 80.0
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 5.1e-53 211.1 128 78.9
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 5.1e-53 211.1 128 81.2
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 6.7e-53 210.7 128 78.9
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.5e-52 209.5 127 78.0
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 3.3e-52 208.4 127 81.1
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 5.7e-52 207.6 131 79.4
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 7.4e-52 207.2 127 76.4
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 7.4e-52 207.2 127 79.5
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 7.4e-52 207.2 127 79.5
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.3e-51 206.5 128 80.5
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 2.8e-51 205.3 128 76.6
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 3.7e-51 204.9 128 76.6
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 3.7e-51 204.9 128 76.6
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 4.8e-51 204.5 127 77.2
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 4.8e-51 204.5 124 77.4
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 8.2e-51 203.8 130 75.4
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 8.2e-51 203.8 130 77.7
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 8.2e-51 203.8 127 76.4
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 8.2e-51 203.8 136 74.3
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 1.8e-50 202.6 128 80.5
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 1.8e-50 202.6 128 80.5
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 2.4e-50 202.2 127 75.6
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 2.4e-50 202.2 128 79.7
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 2.4e-50 202.2 128 79.7
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.1e-50 201.8 128 76.6
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.1e-50 201.8 127 76.4
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 3.1e-50 201.8 116 82.8
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 4.1e-50 201.4 128 75.8
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 5.3e-50 201.1 113 83.2
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 6.9e-50 200.7 121 79.3
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 9.0e-50 200.3 124 79.0
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 9.0e-50 200.3 121 78.5
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 1.2e-49 199.9 134 73.1
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 1.5e-49 199.5 124 78.2
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 2.6e-49 198.7 124 77.4
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 2.6e-49 198.7 127 77.2
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 3.4e-49 198.4 125 77.6
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 3.4e-49 198.4 124 77.4
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 3.4e-49 198.4 124 77.4
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 3.4e-49 198.4 124 77.4
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 4.5e-49 198.0 124 76.6
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 5.8e-49 197.6 124 76.6
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 7.6e-49 197.2 124 77.4
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 7.6e-49 197.2 124 77.4
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 7.6e-49 197.2 124 77.4
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 7.6e-49 197.2 124 77.4
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 7.6e-49 197.2 114 84.2
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 1.0e-48 196.8 128 75.0
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 2.2e-48 195.7 118 78.0
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 2.9e-48 195.3 121 77.7
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 2.9e-48 195.3 116 78.4
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 2.9e-48 195.3 116 78.4
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 2.9e-48 195.3 127 75.6
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 3.8e-48 194.9 127 73.2
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 5.0e-48 194.5 120 80.0
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 5.0e-48 194.5 127 77.2
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 6.5e-48 194.1 149 65.1
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 8.4e-48 193.7 124 74.2
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.9e-47 192.6 121 75.2
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 1.9e-47 192.6 125 75.2
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 3.2e-47 191.8 118 78.8
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 3.2e-47 191.8 118 77.1
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 1.6e-46 189.5 114 77.2
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 1.6e-46 189.5 114 77.2
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 7.9e-46 187.2 117 75.2
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 1.3e-45 186.4 125 72.8
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 1.8e-45 186.0 143 65.0
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 3.9e-45 184.9 125 70.4
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 5.1e-45 184.5 118 72.9
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.5e-44 183.0 141 64.5
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 3.3e-44 181.8 113 72.6
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 5.7e-44 181.0 124 71.8
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 7.4e-44 180.6 115 75.7
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 9.7e-44 180.3 117 72.6
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.6e-43 179.5 146 62.3
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 2.2e-43 179.1 117 70.9
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 3.7e-43 178.3 128 68.8
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 3.7e-43 178.3 117 71.8
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 3.7e-43 178.3 132 69.7
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 8.2e-43 177.2 117 71.8
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 1.4e-42 176.4 125 68.0
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 2.4e-42 175.6 113 73.5
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 2.4e-42 175.6 125 68.8
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 3.1e-42 175.3 122 68.9
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 6.9e-42 174.1 127 66.9
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 9.0e-42 173.7 122 70.5
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 1.2e-41 173.3 127 66.9
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.5e-41 172.9 114 69.3
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 1.5e-41 172.9 111 72.1
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 2.0e-41 172.6 125 68.8
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 4.6e-38 161.4 127 61.4
Sp5g34440 Schrenkiella parvula HOM05D005454 ORTHO05D006781 7.4e-28 127.5 81 77.8
CDE02G1314 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 2.4e-26 122.5 88 70.5
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 2.4e-26 122.5 118 52.5
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 2.0e-25 119.4 112 51.8
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 1.3e-24 116.7 73 72.6
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 8.5e-24 114.0 67 77.6
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 1.9e-23 112.8 72 68.1
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 3.2e-23 112.1 67 74.6
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 5.5e-23 111.3 67 73.1
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 5.5e-23 111.3 112 50.0
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 7.2e-23 110.9 67 71.6
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 7.2e-23 110.9 67 71.6
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 4.7e-22 108.2 75 66.7
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 8.0e-22 107.5 67 71.6
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 1.5e-20 103.2 57 80.7
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 1.5e-20 103.2 77 61.0
Atru.chr1.31 Acer truncatum HOM05D005454 ORTHO05D006781 2.6e-20 102.4 82 67.1
Cfa017757 Carpinus fangiana HOM05D005454 ORTHO05D006781 2.2e-19 99.4 59 83.1
Potri.010G174700 Populus trichocarpa HOM05D005454 ORTHO05D006781 3.1e-18 95.5 57 82.5
Actinidia03633 Actinidia chinensis HOM05D005454 ORTHO05D012925 2.0e-17 92.8 60 76.7
QL04p094659 Quercus lobata HOM05D005454 ORTHO05D006781 2.0e-17 92.8 59 79.7
CBR_g2846 Chara braunii HOM05D005454 ORTHO05D006781 2.6e-17 92.4 122 41.8
CARHR073050 Cardamine hirsuta HOM05D005454 ORTHO05D006781 3.5e-17 92.0 56 82.1
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 1.0e-16 90.5 108 47.2
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 3.8e-16 88.6 68 64.7
BolC8t48807H Brassica oleracea HOM05D005454 ORTHO05D006781 8.5e-16 87.4 56 75.0
Cc00_g28770 Coffea canephora HOM05D001769 ORTHO05D001695 4.2e-15 85.1 93 51.6
CDE04G2596 Ceratophyllum demersum HOM05D005454 ORTHO05D006781 1.6e-14 83.2 71 57.7
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 8.0e-14 80.9 57 70.2
SMO367G0923 Selaginella moellendorffii HOM05D005454 ORTHO05D006781 4.4e-12 75.1 121 36.4
BcaC08g42854 Brassica carinata HOM05D005454 ORTHO05D006781 9.8e-12 73.9 45 75.6
C06p00690 Brassica napus HOM05D005454 ORTHO05D006781 9.8e-12 73.9 49 71.4
BolC6t35206H Brassica oleracea HOM05D005454 ORTHO05D006781 9.8e-12 73.9 49 71.4
C03p71170 Brassica napus HOM05D005454 ORTHO05D006781 1.7e-11 73.2 49 71.4
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 2.0e-09 66.2 46 65.2
QL04p094979 Quercus lobata HOM05D000510 ORTHO05D001548 6.1e-06 54.7 44 63.6


User provided reference genes

Program Settings