Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 2.7e-36 154.8 79 100.0
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 2.9e-30 134.8 84 84.5
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 6.0e-28 127.1 78 83.3
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 1.3e-27 125.9 77 81.8
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 1.7e-27 125.6 79 81.0
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 1.7e-27 125.6 79 81.0
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 5.1e-27 124.0 79 82.3
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 6.6e-27 123.6 79 81.0
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 6.6e-27 123.6 79 82.3
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 8.7e-27 123.2 77 81.8
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 1.1e-26 122.9 79 79.7
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 1.1e-26 122.9 79 79.7
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 1.5e-26 122.5 77 79.2
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 1.9e-26 122.1 79 78.5
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.9e-26 122.1 78 76.9
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 2.5e-26 121.7 79 78.5
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 3.3e-26 121.3 77 80.5
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 77.2
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.3e-26 120.9 77 77.9
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 4.3e-26 120.9 77 79.2
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 78.5
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 5.6e-26 120.6 88 78.4
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 9.6e-26 119.8 79 77.2
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 1.2e-25 119.4 79 78.5
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 1.2e-25 119.4 79 78.5
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 1.6e-25 119.0 79 75.9
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 1.6e-25 119.0 79 75.9
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 1.6e-25 119.0 77 76.6
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 2.1e-25 118.6 79 74.7
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 2.8e-25 118.2 79 74.7
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 2.8e-25 118.2 77 77.9
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 2.8e-25 118.2 77 76.6
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 4.7e-25 117.5 79 77.2
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 4.7e-25 117.5 78 79.5
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 6.2e-25 117.1 79 77.2
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 6.2e-25 117.1 79 75.9
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 8.1e-25 116.7 79 73.4
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.1e-24 116.3 79 74.7
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.1e-24 116.3 74 81.1
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 1.4e-24 115.9 79 75.9
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 1.8e-24 115.5 79 75.9
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 3.1e-24 114.8 79 73.4
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 3.1e-24 114.8 79 73.4
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 3.1e-24 114.8 79 73.4
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 3.1e-24 114.8 78 78.2
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 3.1e-24 114.8 79 72.2
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 6.9e-24 113.6 78 73.1
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 6.9e-24 113.6 78 76.9
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 6.9e-24 113.6 78 76.9
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 1.2e-23 112.8 77 72.7
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 1.5e-23 112.5 79 73.4
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 2.0e-23 112.1 77 74.0
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.0e-23 112.1 78 76.9
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 4.4e-23 110.9 78 76.9
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 7.6e-23 110.2 81 72.8
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 9.9e-23 109.8 80 73.8
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 1.3e-22 109.4 80 72.5
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 1.3e-22 109.4 82 75.6
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 2.9e-22 108.2 81 71.6
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 3.2e-21 104.8 83 71.1
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 5.4e-21 104.0 80 68.8
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 1.2e-20 102.8 63 81.0
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 1.2e-20 102.8 83 72.3
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.2e-20 102.8 80 68.8
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 1.2e-20 102.8 81 66.7
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 1.6e-20 102.4 74 74.3
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 1.6e-20 102.4 82 63.4
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 2.1e-20 102.1 83 71.1
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.1e-20 102.1 81 65.4
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.1e-20 102.1 81 65.4
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 4.6e-20 100.9 80 63.8
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 4.6e-20 100.9 89 62.9
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 4.6e-20 100.9 90 63.3
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 6.0e-20 100.5 78 73.1
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 7.8e-20 100.1 81 63.0
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 7.8e-20 100.1 63 77.8
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-19 99.0 81 61.7
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-19 99.0 81 61.7
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.7e-19 99.0 81 61.7
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 1.7e-19 99.0 89 62.9
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 2.3e-19 98.6 81 67.9
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 2.3e-19 98.6 81 63.0
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.1e-19 97.4 81 61.7
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 6.6e-19 97.1 77 68.8
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.7e-19 96.7 81 60.5
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 8.7e-19 96.7 81 60.5
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.5e-18 95.9 81 60.5
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.5e-18 95.1 82 65.9
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.5e-18 95.1 82 65.9
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 4.3e-18 94.4 80 62.5
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 9.6e-18 93.2 90 64.4
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 8.1e-17 90.1 65 72.3
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.0e-16 87.8 73 61.6
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 1.2e-15 86.3 83 61.4
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 3.4e-15 84.7 79 62.0
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 4.5e-15 84.3 88 54.5
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 8.4e-14 80.1 96 51.0
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 6.7e-11 70.5 89 50.6
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.9e-10 68.9 47 72.3
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 1.9e-10 68.9 81 55.6
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 3.1e-08 61.6 85 48.2
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 5.8e-07 57.4 49 59.2


User provided reference genes

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