Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01483 Erythranthe guttata HOM05D009025 ORTHO05D011227 3.3e-164 581.6 297 100.0
Oeu016927.1 Olea europaea HOM05D009025 ORTHO05D011227 3.7e-54 216.1 348 42.0
Oeu017916.1 Olea europaea HOM05D009025 ORTHO05D011227 1.5e-47 194.1 360 39.2
QL05p066158 Quercus lobata HOM05D009025 ORTHO05D011227 2.5e-26 123.6 375 31.2
DCAR_019912 Daucus carota HOM05D009025 ORTHO05D011227 3.6e-25 119.8 322 31.7
Potri.016G000700 Populus trichocarpa HOM05D009025 ORTHO05D011227 2.0e-23 114.0 400 28.5
TPR.G10502 Trifolium pratense HOM05D009025 ORTHO05D011227 2.2e-22 110.5 332 31.9
Phvul.006G134300 Phaseolus vulgaris HOM05D009025 ORTHO05D011227 8.3e-22 108.6 379 30.9
Psat1g171120 Pisum sativum HOM05D009025 ORTHO05D011227 1.4e-21 107.8 325 32.3
TAR626G0549 Trochodendron aralioides HOM05D009025 ORTHO05D011227 1.8e-21 107.5 359 29.2
Rhsim13G0137900 Rhododendron simsii HOM05D009025 ORTHO05D011227 2.4e-21 107.1 165 40.0
VMungo0540G2122 Vigna mungo HOM05D009025 ORTHO05D011227 2.4e-21 107.1 362 30.1
Medtr2g028180 Medicago truncatula HOM05D009025 ORTHO05D011227 4.1e-21 106.3 321 33.0
Glyma.15G123700 Glycine max HOM05D009025 ORTHO05D011227 5.4e-21 105.9 375 29.9
Lj6g0011463 Lotus japonicus HOM05D009025 ORTHO05D011227 7.0e-21 105.5 335 31.0
Ca_00784_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 1.6e-20 104.4 301 31.6
Ca_11375_v3 Cicer arietinum L. HOM05D009025 ORTHO05D011227 1.6e-20 104.4 301 31.6
Ciclev10015726m.g Citrus clementina HOM05D009025 ORTHO05D011227 2.0e-20 104.0 351 29.9
CiPaw.10G085100 Carya illinoinensis HOM05D009025 ORTHO05D011227 5.9e-20 102.4 420 27.6
arahy.Tifrunner.gnm1.ann1.FQL4BN Arachis hypogaea HOM05D009025 ORTHO05D011227 1.0e-19 101.7 402 28.1
Nn1g07628 Nelumbo nucifera HOM05D009025 ORTHO05D011227 2.9e-19 100.1 397 27.5
CiPaw.09G113300 Carya illinoinensis HOM05D009025 ORTHO05D011227 5.0e-19 99.4 291 32.6
Lalb_Chr20g0119741 Lupinus albus HOM05D009025 ORTHO05D011227 6.6e-19 99.0 364 30.8
CSS0008017 Camellia sinensis var. sinensis HOM05D009025 ORTHO05D011227 5.6e-18 95.9 374 25.9
arahy.Tifrunner.gnm1.ann1.W10PR0 Arachis hypogaea HOM05D009025 ORTHO05D011227 1.2e-17 94.7 405 27.4
Lj2C12T17 Lonicera japonica HOM05D009025 ORTHO05D011227 8.9e-16 88.6 114 44.7
Os08g0499000 Oryza sativa ssp. japonica HOM05D009025 ORTHO05D011227 2.6e-15 87.0 297 26.3
SalBow8G5084 Salvia bowleyana HOM05D009025 ORTHO05D011227 1.7e-14 84.3 151 37.1
Zm00001eb199500 Zea mays HOM05D009025 ORTHO05D011227 7.0e-13 79.0 279 27.2
HPP92_022808 Vanilla planifolia HOM05D009025 ORTHO05D011227 4.7e-09 66.2 279 25.4
Glyma.09G017800 Glycine max HOM05D009025 ORTHO05D011227 1.1e-08 65.1 388 25.3


User provided reference genes

Program Settings