Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 5.9e-98 360.9 189 100.0
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 7.1e-43 177.9 199 55.8
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 2.8e-39 166.0 145 62.1
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 4.7e-39 165.2 119 64.7
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 3.1e-38 162.5 186 48.4
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 4.0e-38 162.2 111 70.3
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.2e-37 160.6 111 66.7
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 7.6e-37 157.9 180 50.6
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.3e-36 157.1 182 48.9
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 1.3e-36 157.1 188 48.4
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 3.8e-36 155.6 187 49.2
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 3.8e-36 155.6 186 46.2
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 8.4e-36 154.5 116 62.9
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 8.4e-36 154.5 203 46.8
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 1.1e-35 154.1 109 69.7
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 1.1e-35 154.1 109 70.6
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.1e-35 154.1 182 48.9
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.4e-35 153.7 109 65.1
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.4e-35 153.7 116 65.5
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 1.4e-35 153.7 116 65.5
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 2.4e-35 152.9 173 50.9
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.2e-35 152.5 187 48.7
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 5.4e-35 151.8 119 63.0
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.1e-35 151.4 107 68.2
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 7.1e-35 151.4 194 47.9
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 9.3e-35 151.0 189 48.1
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.2e-34 150.6 146 59.6
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.6e-34 150.2 187 48.1
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 2.1e-34 149.8 114 63.2
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.7e-34 149.4 108 63.9
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 2.7e-34 149.4 142 57.0
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.3e-33 147.1 114 61.4
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.3e-33 147.1 114 62.3
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 1.3e-33 147.1 158 51.3
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.3e-33 146.4 165 54.5
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 2.3e-33 146.4 165 54.5
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 3.0e-33 146.0 195 44.1
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 3.0e-33 146.0 190 44.7
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 3.9e-33 145.6 172 51.2
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.9e-33 145.6 184 46.7
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 1.5e-32 143.7 106 65.1
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 1.9e-32 143.3 95 70.5
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 1.9e-32 143.3 181 48.6
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.9e-32 143.3 187 46.5
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 2.5e-32 142.9 175 50.9
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.5e-32 142.9 164 49.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 3.3e-32 142.5 113 58.4
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 3.3e-32 142.5 115 60.0
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 4.3e-32 142.1 98 71.4
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 7.3e-32 141.4 147 51.7
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 9.6e-32 141.0 167 47.9
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 1.3e-31 140.6 172 51.2
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 1.6e-31 140.2 124 57.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.6e-31 140.2 202 43.6
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 1.6e-31 140.2 130 53.1
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.1e-31 139.8 119 58.0
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 2.1e-31 139.8 119 58.0
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 2.1e-31 139.8 119 58.0
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 2.1e-31 139.8 97 69.1
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.1e-31 139.8 196 43.4
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 2.8e-31 139.4 115 58.3
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 2.8e-31 139.4 167 49.1
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 3.6e-31 139.0 101 65.3
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 4.8e-31 138.7 119 59.7
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 3.1e-30 136.0 116 58.6
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 3.1e-30 136.0 107 63.6
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 4.0e-30 135.6 116 57.8
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 5.3e-30 135.2 110 60.0
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 5.3e-30 135.2 116 57.8
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 5.3e-30 135.2 138 53.6
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 6.9e-30 134.8 108 61.1
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 2.0e-29 133.3 167 48.5
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 2.0e-29 133.3 167 48.5
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 3.4e-29 132.5 188 42.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 3.4e-29 132.5 108 61.1
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 3.4e-29 132.5 95 67.4
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 3.4e-29 132.5 108 53.7
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.8e-29 131.7 180 44.4
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 9.9e-29 131.0 96 70.8
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.2e-28 129.8 189 45.5
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.9e-28 129.4 111 54.1
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 8.4e-28 127.9 106 59.4
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 8.4e-28 127.9 103 57.3
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 1.1e-27 127.5 188 46.8
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 1.9e-27 126.7 107 55.1
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 3.2e-27 125.9 156 46.8
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.9e-25 119.0 88 62.5
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 2.5e-24 116.3 156 46.2
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 1.3e-23 114.0 177 41.8
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 3.7e-23 112.5 102 55.9
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 6.2e-23 111.7 102 53.9
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 3.1e-22 109.4 104 53.8
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 4.0e-22 109.0 72 69.4
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 1.5e-21 107.1 76 65.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 3.4e-21 105.9 74 66.2
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 2.2e-20 103.2 95 54.7
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.2e-19 99.4 86 48.8
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 2.7e-18 96.3 72 66.7
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 3.5e-18 95.9 88 53.4
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 7.9e-18 94.7 90 52.2
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 3.0e-17 92.8 101 44.6
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 3.9e-17 92.4 76 61.8
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 2.6e-13 79.7 62 61.3
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.7e-10 69.7 190 36.3
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 6.3e-07 58.5 44 63.6
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.1e-06 57.8 99 42.4


User provided reference genes

Program Settings