Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01429 Erythranthe guttata HOM05D002882 ORTHO05D003127 1.2e-30 136.0 73 100.0
SGA_v2.0_scaffold7G03714 Striga asiatica HOM05D004683 ORTHO05D005388 7.0e-23 110.2 74 81.1
SalBow8G3098 Salvia bowleyana HOM05D002882 ORTHO05D003127 1.9e-20 102.1 66 80.3
Solyc11g012600.3 Solanum lycopersicum HOM05D002882 ORTHO05D003127 6.3e-16 87.0 63 71.4
Sopen11g007330 Solanum pennellii HOM05D002882 ORTHO05D003127 6.3e-16 87.0 63 71.4
Oeu047048.1 Olea europaea HOM05D002882 ORTHO05D003127 8.3e-16 86.7 65 73.8
PGSC0003DMG400013293 Solanum tuberosum HOM05D002232 ORTHO05D002323 4.1e-15 84.3 63 68.3
CAN.G696.9 Capsicum annuum HOM05D002882 ORTHO05D003127 1.6e-14 82.4 66 68.2
Solyc04g014840.3 Solanum lycopersicum HOM05D002882 ORTHO05D003127 3.5e-14 81.3 65 66.2
Sopen04g006970 Solanum pennellii HOM05D002882 ORTHO05D003127 3.5e-14 81.3 65 66.2
HanXRQChr01g0004761 Helianthus annuus HOM05D002882 ORTHO05D003127 3.1e-10 68.2 60 61.7
DCAR_030855 Daucus carota HOM05D002882 ORTHO05D003127 4.4e-09 64.3 61 49.2
CiPaw.09G105800 Carya illinoinensis HOM05D002882 ORTHO05D003127 1.4e-07 59.3 67 52.2
Potri.016G008600 Populus trichocarpa HOM05D002882 ORTHO05D003127 1.9e-07 58.9 66 54.5
QL05p068309 Quercus lobata HOM05D002882 ORTHO05D003127 4.1e-07 57.8 67 50.7
Duzib235G1254 Durio zibethinus HOM05D002882 ORTHO05D003127 5.4e-07 57.4 66 47.0
Thecc.06G237300 Theobroma cacao HOM05D002882 ORTHO05D003127 5.4e-07 57.4 65 47.7
Dinv04408 Davidia involucrata HOM05D002882 ORTHO05D003127 7.0e-07 57.0 67 47.8
PSO541G3989 Papaver somniferum HOM05D002882 ORTHO05D003127 7.0e-07 57.0 67 49.3
PSO675G6750 Papaver somniferum HOM05D002882 ORTHO05D003127 7.0e-07 57.0 67 49.3
vmacro03624 Vaccinium macrocarpon HOM05D002882 ORTHO05D003127 7.0e-07 57.0 65 52.3
vmacro23180 Vaccinium macrocarpon HOM05D002882 ORTHO05D003127 7.0e-07 57.0 65 52.3
CANSAT56G1012 Cannabis sativa HOM05D002882 ORTHO05D003127 9.2e-07 56.6 67 49.3
ECA246G4694 Erigeron canadensis HOM05D002882 ORTHO05D003127 1.6e-06 55.8 67 47.8
Lsat_1_v5_gn_3_30780 Lactuca sativa HOM05D002882 ORTHO05D003127 1.6e-06 55.8 68 47.1
Potri.006G017100 Populus trichocarpa HOM05D002882 ORTHO05D003127 1.6e-06 55.8 67 47.8
Nn1g07474 Nelumbo nucifera HOM05D002882 ORTHO05D003127 2.0e-06 55.5 67 47.8
PGR004G1099 Punica granatum HOM05D002882 ORTHO05D003127 2.7e-06 55.1 67 47.8
Glyma.09G012300 Glycine max HOM05D002882 ORTHO05D003127 3.5e-06 54.7 66 48.5
Sabra06G0012100 Salix brachista HOM05D004987 ORTHO05D005960 3.5e-06 54.7 66 48.5
TWI38G0237 Tripterygium wilfordii HOM05D002882 ORTHO05D003127 3.5e-06 54.7 67 44.8
CSS0003576 Camellia sinensis var. sinensis HOM05D002882 ORTHO05D003127 4.6e-06 54.3 67 47.8
Gohir.A12G149100 Gossypium hirsutum HOM05D002882 ORTHO05D003127 4.6e-06 54.3 66 47.0
Gohir.D12G153000 Gossypium hirsutum HOM05D002882 ORTHO05D003127 4.6e-06 54.3 66 47.0
Gorai.008G165500 Gossypium raimondii HOM05D002882 ORTHO05D003127 4.6e-06 54.3 66 47.0
Lalb_Chr13g0294401 Lupinus albus HOM05D002882 ORTHO05D003127 6.0e-06 53.9 66 45.5
Os07g0583000 Oryza sativa ssp. japonica HOM05D002882 ORTHO05D003127 6.0e-06 53.9 65 47.7
HPP92_007896 Vanilla planifolia HOM05D002882 ORTHO05D003127 6.0e-06 53.9 67 46.3
Cc11_g17020 Coffea canephora HOM05D002882 ORTHO05D003127 7.8e-06 53.5 66 48.5
Lalb_Chr07g0187071 Lupinus albus HOM05D002882 ORTHO05D003127 7.8e-06 53.5 66 43.9
Nn3g16443 Nelumbo nucifera HOM05D002882 ORTHO05D003127 7.8e-06 53.5 67 46.3
Oeu035471.1 Olea europaea HOM05D002882 ORTHO05D003127 7.8e-06 53.5 67 44.8


User provided reference genes

Program Settings