Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 3.8e-213 744.6 375 100.0
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 1.7e-160 569.7 323 87.0
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 3.0e-154 548.9 319 83.7
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 7.5e-153 544.3 320 83.4
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 2.8e-152 542.3 323 81.4
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 8.3e-152 540.8 317 83.6
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 2.4e-151 539.3 317 83.3
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 3.1e-151 538.9 320 82.2
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 3.1e-151 538.9 310 85.5
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 7.0e-151 537.7 320 82.8
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 1.2e-150 537.0 322 81.7
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 3.5e-150 535.4 317 82.6
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 4.5e-150 535.0 320 80.0
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 1.7e-149 533.1 321 80.4
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 2.9e-149 532.3 320 80.3
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 2.9e-149 532.3 320 80.3
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 1.1e-148 530.4 317 82.0
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 2.5e-148 529.3 323 79.3
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 7.2e-148 527.7 318 80.8
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 2.1e-147 526.2 320 79.4
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 3.6e-147 525.4 314 81.5
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 4.7e-147 525.0 317 81.4
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 4.7e-147 525.0 321 80.1
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 1.8e-146 523.1 324 78.4
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 2.3e-146 522.7 320 78.8
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 2.3e-146 522.7 323 78.9
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 1.2e-145 520.4 314 80.6
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 2.0e-145 519.6 310 81.0
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 2.6e-145 519.2 314 80.6
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 3.4e-145 518.8 314 80.3
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 3.4e-145 518.8 323 78.3
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 4.4e-145 518.5 323 78.3
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 5.7e-145 518.1 314 79.9
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 1.3e-144 516.9 317 79.2
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 2.2e-144 516.2 316 78.5
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 2.2e-144 516.2 316 78.5
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 2.2e-144 516.2 316 78.5
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 3.7e-144 515.4 316 78.8
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 6.3e-144 514.6 309 81.6
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 1.1e-143 513.8 314 79.9
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 1.4e-143 513.5 349 72.2
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 2.4e-143 512.7 314 78.7
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 5.4e-143 511.5 314 80.9
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 7.0e-143 511.1 314 78.7
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 7.0e-143 511.1 314 78.7
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 9.1e-143 510.8 314 78.7
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 9.1e-143 510.8 314 78.7
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 9.1e-143 510.8 314 78.7
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 1.6e-142 510.0 314 78.3
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 2.0e-142 509.6 314 79.0
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 2.0e-142 509.6 319 76.8
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 2.7e-142 509.2 314 78.3
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 3.5e-142 508.8 320 76.9
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 3.5e-142 508.8 314 78.3
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 5.9e-142 508.1 322 76.4
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 1.0e-141 507.3 311 78.8
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 1.3e-141 506.9 314 78.0
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 1.3e-141 506.9 324 75.6
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 1.3e-141 506.9 324 75.6
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 1.3e-141 506.9 313 79.6
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 2.3e-141 506.1 321 77.3
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 3.8e-141 505.4 310 79.7
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 3.8e-141 505.4 323 77.4
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 6.6e-141 504.6 320 75.9
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 1.9e-140 503.1 311 78.1
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 2.5e-140 502.7 318 78.0
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 3.3e-140 502.3 310 81.3
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 1.6e-139 500.0 302 79.5
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 1.4e-138 496.9 319 75.5
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 1.4e-138 496.9 321 75.1
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 2.6e-137 492.7 304 78.3
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 2.6e-137 492.7 324 74.1
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 3.4e-137 492.3 318 73.9
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 4.4e-137 491.9 329 74.8
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 3.7e-136 488.8 321 73.8
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 3.7e-136 488.8 321 73.8
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 4.9e-136 488.4 320 75.0
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 8.3e-136 487.6 315 78.1
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 8.3e-136 487.6 316 73.7
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 1.8e-135 486.5 321 74.1
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 2.4e-135 486.1 318 73.3
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 2.4e-135 486.1 314 73.6
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 5.4e-135 485.0 313 75.7
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 5.4e-135 485.0 318 73.3
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 1.2e-134 483.8 311 75.6
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 1.6e-134 483.4 322 72.7
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 1.6e-134 483.4 321 73.8
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 7.8e-134 481.1 315 74.3
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.0e-133 478.4 315 72.7
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 6.6e-133 478.0 321 72.9
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 3.3e-132 475.7 317 72.6
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 3.3e-132 475.7 314 72.9
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 4.3e-132 475.3 315 72.1
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 1.8e-130 469.9 317 72.2
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 3.1e-130 469.2 317 74.1
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 9.8e-129 464.2 320 68.8
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 4.9e-128 461.8 318 69.2
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 2.4e-127 459.5 318 69.2
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 4.1e-127 458.8 321 68.2
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 4.1e-127 458.8 321 68.2
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 4.1e-127 458.8 296 74.7
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 7.0e-127 458.0 318 68.9
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 1.2e-126 457.2 318 68.9
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 1.6e-126 456.8 315 69.5
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 2.0e-126 456.4 318 68.9
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 1.3e-125 453.8 318 68.9
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 1.3e-125 453.8 315 69.2
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 6.6e-125 451.4 317 70.0
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 8.6e-125 451.1 315 69.5
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 1.9e-124 449.9 319 68.7
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 3.3e-124 449.1 310 70.3
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 4.3e-124 448.7 319 67.4
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 2.1e-123 446.4 320 65.3
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 4.7e-123 445.3 319 66.8
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 8.0e-123 444.5 319 66.1
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 6.4e-120 434.9 317 62.5
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 6.4e-120 434.9 318 64.8
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 2.4e-119 433.0 319 68.0
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 1.9e-116 423.3 320 61.2
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 3.3e-116 422.5 310 61.9
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 1.4e-111 407.1 313 64.5
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 4.0e-106 389.0 225 84.9
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 3.5e-102 375.9 223 82.1
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 2.3e-101 373.2 318 58.2
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 5.1e-93 345.5 251 66.5
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 3.1e-90 336.3 320 49.7
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 4.5e-89 332.4 318 53.1
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 6.0e-86 322.0 314 49.4
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 1.4e-82 310.8 310 48.1
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 2.0e-81 307.0 322 45.7
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 9.3e-79 298.1 322 43.8
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 1.1e-66 258.1 161 78.3
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 9.0e-66 255.0 181 71.3
AUR62021848 Chenopodium quinoa HOM05D004898 ORTHO05D005574 5.3e-58 229.2 139 78.4
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 1.2e-54 218.0 171 61.4
BcaC06g31368 Brassica carinata HOM05D004898 ORTHO05D005574 2.6e-49 200.3 124 75.8
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 1.2e-33 148.3 150 54.7
CiPaw.02G047500 Carya illinoinensis HOM05D004898 ORTHO05D005574 4.5e-33 146.4 97 72.2
TPR.G39985 Trifolium pratense HOM05D004898 ORTHO05D005574 3.7e-19 100.1 92 51.1
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 4.9e-19 99.8 71 67.6
Nitab4.5_0003626g0040 Nicotiana tabacum HOM05D004898 ORTHO05D005574 1.2e-09 68.6 39 79.5
VMungo1383G2427 Vigna mungo HOM05D035140 ORTHO05D005574 3.9e-08 63.5 46 67.4
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 5.6e-07 59.7 46 58.7
Zm00001eb361420 Zea mays HOM05D032919 ORTHO05D005574 1.6e-06 58.2 43 60.5


User provided reference genes

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