Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01366 Erythranthe guttata HOM05D004992 ORTHO05D006004 6.7e-60 233.8 116 100.0
Oeu051218.1 Olea europaea HOM05D004992 ORTHO05D006004 2.8e-18 95.5 113 52.2
SGA_v2.0_scaffold7G03870 Striga asiatica HOM05D004992 ORTHO05D006004 1.2e-16 90.1 117 47.9
Nitab4.5_0010096g0060 Nicotiana tabacum HOM05D004992 ORTHO05D006004 6.5e-15 84.3 115 45.2
Solyc02g080360.1 Solanum lycopersicum HOM05D004992 ORTHO05D006004 3.2e-14 82.0 114 43.9
Sopen02g025060 Solanum pennellii HOM05D004992 ORTHO05D006004 3.2e-14 82.0 114 43.9
Dinv13873 Davidia involucrata HOM05D004992 ORTHO05D006004 9.4e-14 80.5 108 48.1
Cc09_g01920 Coffea canephora HOM05D004992 ORTHO05D006004 2.1e-13 79.3 110 49.1
Hma1.2p1_0091F.1_g046260 Hydrangea macrophylla HOM05D004992 ORTHO05D006004 4.7e-13 78.2 114 48.2
Peaxi162Scf00262g00051 Petunia axillaris HOM05D004992 ORTHO05D006004 6.1e-13 77.8 114 43.9
Sabra04G0010400 Salix brachista HOM05D003428 ORTHO05D004131 8.0e-13 77.4 113 43.4
CSS0017416 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 1.0e-12 77.0 116 44.8
Cfa000249 Carpinus fangiana HOM05D004992 ORTHO05D006004 1.4e-12 76.6 107 45.8
PGSC0003DMG400016488 Solanum tuberosum HOM05D004992 ORTHO05D006004 1.8e-12 76.3 113 38.9
Potri.004G018600 Populus trichocarpa HOM05D004992 ORTHO05D006004 2.3e-12 75.9 109 45.0
Haze_06774 Corylus avellana HOM05D003428 ORTHO05D004131 4.0e-12 75.1 106 45.3
Oeu037355.1 Olea europaea HOM05D004992 ORTHO05D006004 1.2e-11 73.6 111 47.7
CSS0025190 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 5.7e-11 71.2 108 44.4
CSS0030561 Camellia sinensis var. sinensis HOM05D004992 ORTHO05D006004 5.7e-11 71.2 108 44.4
Hma1.2p1_0813F.1_g222590 Hydrangea macrophylla HOM05D004992 ORTHO05D006004 1.3e-10 70.1 88 50.0
QL05p074036 Quercus lobata HOM05D004992 ORTHO05D006004 1.3e-10 70.1 107 46.7
Sed0007059 Sechium edule HOM05D004992 ORTHO05D006004 1.3e-10 70.1 113 46.0
Manes.17G037200 Manihot esculenta HOM05D004992 ORTHO05D006004 3.7e-10 68.6 111 44.1
CiPaw.09G089400 Carya illinoinensis HOM05D004992 ORTHO05D006004 6.3e-10 67.8 107 43.0
PGR042G3122 Punica granatum HOM05D004992 ORTHO05D006004 6.3e-10 67.8 117 44.4
CiPaw.10G069500 Carya illinoinensis HOM05D004992 ORTHO05D006004 1.1e-09 67.0 106 40.6
Glyma.13G206400 Glycine max HOM05D004992 ORTHO05D006004 1.8e-09 66.2 106 39.6
GSVIVG01012656001 Vitis vinifera HOM05D004992 ORTHO05D006004 1.8e-09 66.2 107 42.1
Eucgr.D01305 Eucalyptus grandis HOM05D004992 ORTHO05D006004 2.4e-09 65.9 102 47.1
Eucgr.L03501 Eucalyptus grandis HOM05D004992 ORTHO05D006004 2.4e-09 65.9 102 47.1
TWI38G1979 Tripterygium wilfordii HOM05D004992 ORTHO05D006004 2.4e-09 65.9 105 41.9
Lsat_1_v5_gn_7_17380 Lactuca sativa HOM05D004992 ORTHO05D006004 3.1e-09 65.5 127 37.8
CANSAT56G2390 Cannabis sativa HOM05D004992 ORTHO05D006004 4.1e-09 65.1 111 38.7
Ciclev10016836m.g Citrus clementina HOM05D004992 ORTHO05D006004 4.1e-09 65.1 108 39.8
Nitab4.5_0010096g0020 Nicotiana tabacum HOM05D000001 ORTHO05D009485 4.1e-09 65.1 110 41.8
Phvul.006G151000 Phaseolus vulgaris HOM05D004992 ORTHO05D006004 4.1e-09 65.1 106 41.5
AL7G32150 Arabidopsis lyrata HOM05D004992 ORTHO05D006004 5.4e-09 64.7 112 36.6
VMungo0540G0931 Vigna mungo HOM05D004992 ORTHO05D006004 5.4e-09 64.7 107 41.1
Ca_00623_v3 Cicer arietinum L. HOM05D004992 ORTHO05D006004 7.0e-09 64.3 112 37.5
ClCG03G004870 Citrullus lanatus HOM05D004992 ORTHO05D006004 1.2e-08 63.5 94 44.7
Sed0000784 Sechium edule HOM05D004992 ORTHO05D006004 1.2e-08 63.5 104 41.3
Cpa.g.sc198.27 Carica papaya HOM05D004992 ORTHO05D006004 1.6e-08 63.2 107 38.3
Duzib192G0598 Durio zibethinus HOM05D004992 ORTHO05D006004 2.0e-08 62.8 107 43.0
Peaxi162Scf00203g00113 Petunia axillaris HOM05D004992 ORTHO05D006004 2.7e-08 62.4 103 37.9
Medtr2g022820 Medicago truncatula HOM05D004992 ORTHO05D006004 4.5e-08 61.6 107 36.4
ClCG01G022080 Citrullus lanatus HOM05D004992 ORTHO05D006004 7.7e-08 60.8 107 39.3
MELO3C007381.2 Cucumis melo HOM05D004992 ORTHO05D006004 1.0e-07 60.5 104 42.3
Potri.011G000400 Populus trichocarpa HOM05D004992 ORTHO05D006004 1.3e-07 60.1 99 42.4
TPR.G7639 Trifolium pratense HOM05D004992 ORTHO05D006004 1.3e-07 60.1 106 34.9
arahy.Tifrunner.gnm1.ann1.FJ4Y8F Arachis hypogaea HOM05D004992 ORTHO05D006004 1.7e-07 59.7 108 36.1
Gohir.A06G147400 Gossypium hirsutum HOM05D004992 ORTHO05D006004 1.7e-07 59.7 113 38.1
AT4G21780 Arabidopsis thaliana HOM05D004992 ORTHO05D006004 2.3e-07 59.3 115 36.5
TWI38G1613 Tripterygium wilfordii HOM05D004992 ORTHO05D006004 2.3e-07 59.3 105 41.0
COL.COLO4_31744 Corchorus olitorius HOM05D004992 ORTHO05D006004 2.9e-07 58.9 109 37.6
EL10Ac8g20021 Beta vulgaris HOM05D004992 ORTHO05D006004 3.8e-07 58.5 123 36.6
Prupe.4G023900 Prunus persica HOM05D004992 ORTHO05D006004 3.8e-07 58.5 109 39.4
Ciclev10009906m.g Citrus clementina HOM05D004992 ORTHO05D006004 5.0e-07 58.2 109 36.7
FAN21G0406 Fragaria x ananassa HOM05D004992 ORTHO05D006004 5.0e-07 58.2 108 38.9
Gohir.D06G153200 Gossypium hirsutum HOM05D004992 ORTHO05D006004 5.0e-07 58.2 113 37.2
Gorai.010G179200 Gossypium raimondii HOM05D004992 ORTHO05D006004 5.0e-07 58.2 113 37.2
THA.LOC104806295 Tarenaya hassleriana HOM05D004992 ORTHO05D006004 5.0e-07 58.2 114 37.7
arahy.Tifrunner.gnm1.ann1.PC5S43 Arachis hypogaea HOM05D004992 ORTHO05D006004 8.6e-07 57.4 104 33.7
TPR.G37097 Trifolium pratense HOM05D004992 ORTHO05D006004 8.6e-07 57.4 123 35.0
FvH4_3g02450 Fragaria vesca HOM05D004992 ORTHO05D006004 1.1e-06 57.0 108 38.0
arahy.Tifrunner.gnm1.ann1.T879FL Arachis hypogaea HOM05D004992 ORTHO05D006004 1.5e-06 56.6 104 33.7
MELO3C002469.2 Cucumis melo HOM05D004992 ORTHO05D006004 1.5e-06 56.6 107 41.1
Glyma.17G015100 Glycine max HOM05D004992 ORTHO05D006004 1.5e-06 56.6 107 40.2
RcHm_v2.0_Chr5g0003701 Rosa chinensis HOM05D004992 ORTHO05D006004 1.5e-06 56.6 109 37.6
Thecc.06G217500 Theobroma cacao HOM05D004992 ORTHO05D006004 1.5e-06 56.6 113 38.1
TAR624G0245 Trochodendron aralioides HOM05D004992 ORTHO05D006004 1.9e-06 56.2 103 39.8
arahy.Tifrunner.gnm1.ann1.9Z1Z9Z Arachis hypogaea HOM05D004992 ORTHO05D006004 2.5e-06 55.8 108 35.2
Duzib235G0746 Durio zibethinus HOM05D004992 ORTHO05D006004 2.5e-06 55.8 114 40.4
Duzib268G1102 Durio zibethinus HOM05D004992 ORTHO05D006004 2.5e-06 55.8 102 37.3
BcaNung02246 Brassica carinata HOM05D004992 ORTHO05D006004 3.3e-06 55.5 112 36.6
Carub.0007s1962 Capsella rubella HOM05D004992 ORTHO05D006004 4.2e-06 55.1 113 34.5
CsaV3_1G010900 Cucumis sativus L. HOM05D004992 ORTHO05D006004 5.5e-06 54.7 107 41.1
CsaV3_6G049140 Cucumis sativus L. HOM05D004992 ORTHO05D006004 5.5e-06 54.7 76 48.7
Glyma.07G259100 Glycine max HOM05D004992 ORTHO05D006004 5.5e-06 54.7 107 41.1
CARHR228520 Cardamine hirsuta HOM05D004992 ORTHO05D006004 7.2e-06 54.3 117 33.3


User provided reference genes

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