Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01360 Erythranthe guttata HOM05D005176 ORTHO05D006482 1.2e-214 749.6 374 100.0
Oeu002752.3 Olea europaea HOM05D005176 ORTHO05D006482 3.7e-152 542.0 373 72.4
SalBow8G4341 Salvia bowleyana HOM05D005176 ORTHO05D006482 4.5e-150 535.0 371 75.2
MSTRG.16005 Avicennia marina HOM05D005176 ORTHO05D006482 5.9e-150 534.6 370 73.8
PGSC0003DMG400013335 Solanum tuberosum HOM05D005176 ORTHO05D006482 2.8e-144 515.8 379 71.8
Solyc11g011990.2 Solanum lycopersicum HOM05D005176 ORTHO05D006482 5.3e-143 511.5 378 71.4
Sopen11g006800 Solanum pennellii HOM05D005176 ORTHO05D006482 2.0e-142 509.6 376 70.7
COL.COLO4_31852 Corchorus olitorius HOM05D005176 ORTHO05D006482 4.5e-142 508.4 342 73.1
Lj1A1237T47 Lonicera japonica HOM05D005176 ORTHO05D006482 3.8e-141 505.4 355 71.3
SGA_v2.0_scaffold7G03794 Striga asiatica HOM05D005176 ORTHO05D006482 7.2e-140 501.1 359 73.0
DCAR_004870 Daucus carota HOM05D005176 ORTHO05D006482 6.1e-139 498.0 328 75.9
Hma1.2p1_0660F.1_g197450 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 8.0e-139 497.7 368 69.8
Cpa.g.sc152.62 Carica papaya HOM05D005176 ORTHO05D006482 2.3e-138 496.1 374 69.0
Dinv20117 Davidia involucrata HOM05D005176 ORTHO05D006482 2.3e-138 496.1 354 72.6
AUR62012769 Chenopodium quinoa HOM05D005176 ORTHO05D006482 1.2e-137 493.8 361 70.6
Aqoxy1G04164 Aquilegia oxysepala HOM05D005176 ORTHO05D006482 2.6e-137 492.7 369 67.2
Sabra11G0011400 Salix brachista HOM05D005176 ORTHO05D006482 2.6e-137 492.7 318 75.8
Sabra11G0013200 Salix brachista HOM05D005176 ORTHO05D006482 2.6e-137 492.7 318 75.8
Sc05g0009510 Simmondsia chinensis HOM05D005176 ORTHO05D006482 3.4e-137 492.3 325 75.4
Gorai.009G182200 Gossypium raimondii HOM05D005176 ORTHO05D006482 5.7e-137 491.5 323 75.2
Gohir.A05G173800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 7.5e-137 491.1 323 74.6
MD10G1328600 Malus domestica HOM05D005176 ORTHO05D006482 1.3e-136 490.3 367 69.2
Rhsim13G0148600 Rhododendron simsii HOM05D005176 ORTHO05D006482 1.3e-136 490.3 368 68.2
MELO3C021713.2 Cucumis melo HOM05D005176 ORTHO05D006482 2.2e-136 489.6 354 69.5
TWI63G1683 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 2.8e-136 489.2 366 68.6
TAR626G1813 Trochodendron aralioides HOM05D005176 ORTHO05D006482 2.8e-136 489.2 371 69.0
CAN.G1186.9 Capsicum annuum HOM05D005176 ORTHO05D006482 3.7e-136 488.8 303 78.5
PSO832G1336 Papaver somniferum HOM05D005176 ORTHO05D006482 4.8e-136 488.4 307 76.5
Prupe.4G013400 Prunus persica HOM05D005176 ORTHO05D006482 6.3e-136 488.0 367 68.4
QL03p008214 Quercus lobata HOM05D005176 ORTHO05D006482 1.1e-135 487.3 354 69.2
EL10Ac8g20147 Beta vulgaris HOM05D005176 ORTHO05D006482 1.4e-135 486.9 363 69.4
Potri.011G021800 Populus trichocarpa HOM05D005176 ORTHO05D006482 5.4e-135 485.0 328 74.4
QL05p070074 Quercus lobata HOM05D005176 ORTHO05D006482 5.4e-135 485.0 354 68.9
Ciclev10015546m.g Citrus clementina HOM05D005176 ORTHO05D006482 9.1e-135 484.2 338 70.7
Haze_06890 Corylus avellana HOM05D005176 ORTHO05D006482 1.2e-134 483.8 353 70.3
FvH4_3g01250 Fragaria vesca HOM05D005176 ORTHO05D006482 2.7e-134 482.6 369 69.1
CSS0003829 Camellia sinensis var. sinensis HOM05D005176 ORTHO05D006482 3.5e-134 482.3 359 68.8
Cc09_g01070 Coffea canephora HOM05D005176 ORTHO05D006482 4.5e-134 481.9 350 70.9
TWI38G1933 Tripterygium wilfordii HOM05D005176 ORTHO05D006482 4.5e-134 481.9 366 68.3
RcHm_v2.0_Chr5g0001781 Rosa chinensis HOM05D005176 ORTHO05D006482 1.0e-133 480.7 369 68.3
Thecc.06G230100 Theobroma cacao HOM05D005176 ORTHO05D006482 1.7e-133 479.9 322 73.0
PGR042G2916 Punica granatum HOM05D005176 ORTHO05D006482 2.9e-133 479.2 313 74.8
Lsat_1_v5_gn_7_14460 Lactuca sativa HOM05D005176 ORTHO05D006482 5.0e-133 478.4 332 70.2
unitig_748.g7945 Utricularia gibba HOM05D005176 ORTHO05D006482 5.0e-133 478.4 369 68.6
CANSAT56G2407 Cannabis sativa HOM05D005176 ORTHO05D006482 6.6e-133 478.0 340 70.3
Eucgr.E03960 Eucalyptus grandis HOM05D005176 ORTHO05D006482 6.6e-133 478.0 308 75.0
Manes.16G002000 Manihot esculenta HOM05D005176 ORTHO05D006482 6.6e-133 478.0 345 69.9
FAN25G2381 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.9e-132 476.5 343 71.1
Gohir.D05G176800 Gossypium hirsutum HOM05D005176 ORTHO05D006482 1.9e-132 476.5 323 74.0
CARHR229150 Cardamine hirsuta HOM05D005176 ORTHO05D006482 2.5e-132 476.1 325 72.0
Hund21443 Selenicereus undatus HOM05D005176 ORTHO05D006482 2.5e-132 476.1 314 75.8
AL7G31370 Arabidopsis lyrata HOM05D005176 ORTHO05D006482 4.2e-132 475.3 354 68.9
Nn1g03357 Nelumbo nucifera HOM05D005176 ORTHO05D006482 1.6e-131 473.4 310 75.2
Thhalv10025624m.g Eutrema salsugineum HOM05D005176 ORTHO05D006482 2.8e-131 472.6 326 71.2
TPR.G13024 Trifolium pratense HOM05D005176 ORTHO05D006482 3.6e-131 472.2 301 76.4
Sp7g20380 Schrenkiella parvula HOM05D005176 ORTHO05D006482 8.0e-131 471.1 326 72.1
CsaV3_1G045890 Cucumis sativus L. HOM05D005176 ORTHO05D006482 1.4e-130 470.3 314 70.7
vmacro03656 Vaccinium macrocarpon HOM05D005176 ORTHO05D006482 1.4e-130 470.3 383 65.5
arahy.Tifrunner.gnm1.ann1.E5J967 Arachis hypogaea HOM05D005176 ORTHO05D006482 1.8e-130 469.9 301 78.1
Lj6g0018145 Lotus japonicus HOM05D005176 ORTHO05D006482 2.3e-130 469.5 303 77.9
arahy.Tifrunner.gnm1.ann1.8PRB68 Arachis hypogaea HOM05D005176 ORTHO05D006482 3.0e-130 469.2 301 77.7
Aa31LG6G4370 Aethionema arabicum HOM05D005176 ORTHO05D006482 5.2e-130 468.4 370 66.2
THA.LOC104812984 Tarenaya hassleriana HOM05D005176 ORTHO05D006482 6.8e-130 468.0 320 71.2
Phvul.006G144800 Phaseolus vulgaris HOM05D005176 ORTHO05D006482 1.5e-129 466.8 314 74.8
Glyma.09G008500 Glycine max HOM05D005176 ORTHO05D006482 2.6e-129 466.1 315 74.3
Glyma.15G112900 Glycine max HOM05D005176 ORTHO05D006482 3.4e-129 465.7 315 74.0
BcaNung03749 Brassica carinata HOM05D005176 ORTHO05D006482 1.3e-128 463.8 325 70.8
Sabra04G0001100 Salix brachista HOM05D005176 ORTHO05D006482 2.8e-128 462.6 312 72.8
VMungo0540G1825 Vigna mungo HOM05D005176 ORTHO05D006482 2.8e-128 462.6 332 72.3
Carub.0007s1906 Capsella rubella HOM05D005176 ORTHO05D006482 4.9e-128 461.8 358 66.5
BcaC09g51146 Brassica carinata HOM05D005176 ORTHO05D006482 1.1e-127 460.7 328 71.6
HanXRQChr05g0129171 Helianthus annuus HOM05D005176 ORTHO05D006482 1.1e-127 460.7 314 72.6
BolC1t01601H Brassica oleracea HOM05D005176 ORTHO05D006482 1.4e-127 460.3 327 71.9
Nitab4.5_0000143g0540 Nicotiana tabacum HOM05D005176 ORTHO05D006482 2.4e-127 459.5 374 66.0
CiPaw.09G100100 Carya illinoinensis HOM05D005176 ORTHO05D006482 9.2e-127 457.6 333 70.9
Lalb_Chr15g0087861 Lupinus albus HOM05D005176 ORTHO05D006482 4.5e-126 455.3 301 73.8
Psat1g177440 Pisum sativum HOM05D005176 ORTHO05D006482 4.5e-126 455.3 314 72.0
BraA01t01306Z Brassica rapa HOM05D005176 ORTHO05D006482 5.9e-126 454.9 327 70.3
Medtr2g025140 Medicago truncatula HOM05D005176 ORTHO05D006482 1.0e-125 454.1 336 69.0
Potri.004G002600 Populus trichocarpa HOM05D005176 ORTHO05D006482 1.0e-125 454.1 315 72.4
Cfa000134 Carpinus fangiana HOM05D005176 ORTHO05D006482 2.3e-125 453.0 337 70.0
Sed0020812 Sechium edule HOM05D005176 ORTHO05D006482 2.3e-125 453.0 338 67.5
Actinidia26877 Actinidia chinensis HOM05D005176 ORTHO05D006482 6.6e-125 451.4 334 70.1
Ca_00707_v3 Cicer arietinum L. HOM05D005176 ORTHO05D006482 6.6e-125 451.4 310 72.9
Peaxi162Scf00063g00213 Petunia axillaris HOM05D005176 ORTHO05D006482 1.9e-124 449.9 374 65.8
PSO210G5061 Papaver somniferum HOM05D005176 ORTHO05D006482 4.3e-124 448.7 363 65.3
C01p16510 Brassica napus HOM05D005176 ORTHO05D006482 2.8e-123 446.0 320 71.6
Atru.chr10.2310 Acer truncatum HOM05D005176 ORTHO05D006482 4.0e-122 442.2 325 68.3
A01p13630 Brassica napus HOM05D005176 ORTHO05D006482 1.5e-121 440.3 319 70.2
ATR1128G104 Amborella trichopoda HOM05D005176 ORTHO05D006482 1.7e-120 436.8 308 71.8
AT4G22260 Arabidopsis thaliana HOM05D005176 ORTHO05D006482 1.7e-120 436.8 351 64.4
Ah.09g234400 Amaranthus hybridus HOM05D005176 ORTHO05D006482 7.8e-118 427.9 336 67.0
MELO3C021708.2 Cucumis melo HOM05D005176 ORTHO05D006482 3.3e-116 422.5 358 60.3
TAR624G0457 Trochodendron aralioides HOM05D005176 ORTHO05D006482 1.8e-114 416.8 227 86.3
Os04g0668900 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D006482 4.0e-114 415.6 305 67.5
MBI16_g26179_MAGBIO Magnolia biondii HOM05D005176 ORTHO05D006482 2.0e-113 413.3 370 61.4
Nitab4.5_0001198g0240 Nicotiana tabacum HOM05D005176 ORTHO05D006482 6.4e-112 408.3 299 70.9
Eucgr.E03967 Eucalyptus grandis HOM05D005176 ORTHO05D006482 1.7e-109 400.2 308 66.9
Zm00001eb066910 Zea mays HOM05D005176 ORTHO05D006482 3.3e-108 396.0 262 71.4
GSVIVG01006689001 Vitis vinifera HOM05D005176 ORTHO05D006482 1.2e-105 387.5 298 66.4
Pp3c1_30120 Physcomitrium patens HOM05D005176 ORTHO05D006482 5.8e-105 385.2 305 64.3
MD05G1354300 Malus domestica HOM05D005176 ORTHO05D006482 7.5e-105 384.8 367 57.5
SMO200G0146 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 1.6e-102 377.1 252 70.6
CDE04G3552 Ceratophyllum demersum HOM05D005176 ORTHO05D006482 3.5e-102 375.9 366 55.7
Mapoly0050s0020 Marchantia polymorpha HOM05D005176 ORTHO05D006482 3.0e-101 372.9 278 66.5
FAN21G2852 Fragaria x ananassa HOM05D005176 ORTHO05D006482 1.1e-100 370.9 287 66.2
Pp3c2_11230 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.2e-99 367.5 282 66.7
CBR_g16017 Chara braunii HOM05D005176 ORTHO05D006482 4.4e-97 359.0 237 71.7
ClCG01G009770 Citrullus lanatus HOM05D005176 ORTHO05D006482 9.6e-92 341.3 298 60.4
PSO675G3403 Papaver somniferum HOM05D005176 ORTHO05D006482 3.1e-90 336.3 247 68.0
Zm00001eb066920 Zea mays HOM05D005176 ORTHO05D006482 4.0e-82 309.3 305 55.7
Hma1.2p1_2753F.1_g327930 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 1.3e-80 304.3 289 59.5
Dinv13952 Davidia involucrata HOM05D005176 ORTHO05D006482 1.9e-79 300.4 246 65.4
Duzib160G0919 Durio zibethinus HOM05D005176 ORTHO05D006482 4.6e-78 295.8 364 49.5
PRCOL_00003826 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 3.8e-72 276.2 282 51.8
FAN21G2340 Fragaria x ananassa HOM05D005176 ORTHO05D006482 8.4e-72 275.0 246 63.4
MCO02G133 Micromonas commoda HOM05D005176 ORTHO05D006482 3.5e-70 269.6 214 60.7
HPP92_004745 Vanilla planifolia HOM05D005176 ORTHO05D006482 3.5e-70 269.6 192 70.3
SMO147G0375 Selaginella moellendorffii HOM05D005176 ORTHO05D006482 1.8e-61 240.7 199 56.8
Pp3c27_6780 Physcomitrium patens HOM05D005176 ORTHO05D006482 1.9e-60 237.3 201 55.7
Cre07.g350750 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 3.3e-60 236.5 195 57.4
Mapoly0003s0157 Marchantia polymorpha HOM05D005176 ORTHO05D006482 5.7e-60 235.7 190 58.4
AagrBONN_evm.TU.Sc2ySwM_362.2521 Anthoceros agrestis HOM05D005176 ORTHO05D006482 4.8e-59 232.6 200 55.0
AUR62021889 Chenopodium quinoa HOM05D005176 ORTHO05D006482 3.1e-58 229.9 361 43.5
Cre03.g172500 Chlamydomonas reinhardtii HOM05D005176 ORTHO05D006482 3.4e-57 226.5 197 56.3
MCO02G403 Micromonas commoda HOM05D005176 ORTHO05D006482 3.9e-53 213.0 209 50.7
Duzib235G1273 Durio zibethinus HOM05D005176 ORTHO05D006482 3.2e-47 193.4 111 80.2
GSVIVG01007272001 Vitis vinifera HOM05D005176 ORTHO05D006482 3.9e-45 186.4 295 42.7
Hma1.2p1_0298F.1_g117340 Hydrangea macrophylla HOM05D005176 ORTHO05D006482 6.5e-40 169.1 227 49.8
PRCOL_00006497 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 9.4e-39 165.2 164 50.0
SEGI_26802 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 6.1e-38 162.5 112 67.9
HPP92_004744 Vanilla planifolia HOM05D005176 ORTHO05D006482 4.4e-36 156.4 102 71.6
AagrBONN_evm.TU.Sc2ySwM_344.415 Anthoceros agrestis HOM05D005176 ORTHO05D006482 1.3e-35 154.8 160 51.9
SEGI_01990 Sequoiadendron giganteum HOM05D005176 ORTHO05D006482 4.0e-29 133.3 68 88.2
QL03p008204 Quercus lobata HOM05D005176 ORTHO05D006482 4.4e-28 129.8 113 60.2
A03p53390 Brassica napus HOM05D005176 ORTHO05D006482 6.1e-22 109.4 115 53.0
BraA03t14406Z Brassica rapa HOM05D005176 ORTHO05D006482 2.3e-16 90.9 101 51.5
arahy.Tifrunner.gnm1.ann1.E0HWS1 Arachis hypogaea HOM05D005176 ORTHO05D038931 2.9e-16 90.5 94 56.4
CBR_g12323 Chara braunii HOM05D005176 ORTHO05D006482 6.6e-16 89.4 65 63.1
Os03g0847500 Oryza sativa ssp. japonica HOM05D005176 ORTHO05D038931 3.3e-15 87.0 132 44.7
Lj3g0010948 Lotus japonicus HOM05D005176 ORTHO05D006482 2.3e-13 80.9 37 91.9
CBR_g12320 Chara braunii HOM05D000019 ORTHO05D009492 1.5e-12 78.2 81 49.4
Eucgr.E03965 Eucalyptus grandis HOM05D005176 ORTHO05D006482 3.4e-12 77.0 51 70.6
BolC7t45661H Brassica oleracea HOM05D005176 ORTHO05D006482 2.0e-09 67.8 71 52.1
PRCOL_00006496 Prasinoderma coloniale HOM05D005176 ORTHO05D006482 5.6e-07 59.7 53 58.5


User provided reference genes

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