Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 5.7e-26 120.6 80 100.0
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 2.2e-14 82.0 80 53.8
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.2e-13 77.8 80 51.2
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.5e-13 77.4 80 51.2
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 4.7e-12 74.3 78 48.7
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 1.0e-11 73.2 48 70.8
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.3e-11 72.0 77 48.1
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 3.0e-11 71.6 79 48.1
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 3.0e-11 71.6 78 50.0
TAR624G1029 Trochodendron aralioides HOM05D007037 ORTHO05D006691 4.0e-11 71.2 84 50.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 5.2e-11 70.9 81 51.9
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.1e-10 69.7 81 48.1
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-10 69.7 77 46.8
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 1.1e-10 69.7 80 46.2
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 3.3e-10 68.2 80 47.5
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 5.7e-10 67.4 76 46.1
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 5.7e-10 67.4 78 48.7
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 5.7e-10 67.4 80 48.8
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 7.5e-10 67.0 81 49.4
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 9.7e-10 66.6 78 46.2
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.7e-09 65.9 79 48.1
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.2e-09 65.5 80 46.2
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 2.8e-09 65.1 78 47.4
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 4.8e-09 64.3 78 46.2
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 8.2e-09 63.5 79 67.1
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 8.2e-09 63.5 79 41.8
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 8.2e-09 63.5 80 46.2
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 8.2e-09 63.5 80 46.2
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 8.2e-09 63.5 79 41.8
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 1.1e-08 63.2 81 45.7
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 1.4e-08 62.8 79 45.6
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 1.4e-08 62.8 78 41.0
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 1.4e-08 62.8 75 61.3
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 1.8e-08 62.4 79 40.5
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 1.8e-08 62.4 78 42.3
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 2.4e-08 62.0 75 40.0
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 3.1e-08 61.6 78 42.3
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 3.1e-08 61.6 76 42.1
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 4.1e-08 61.2 83 48.2
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 5.3e-08 60.8 76 43.4
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 7.0e-08 60.5 76 43.4
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 9.1e-08 60.1 78 39.7
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 9.1e-08 60.1 78 41.0
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 1.2e-07 59.7 77 41.6
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 1.6e-07 59.3 75 46.7
Aqoxy4G01827 Aquilegia oxysepala HOM05D009550 ORTHO05D006691 2.7e-07 58.5 84 59.5
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 2.7e-07 58.5 82 43.9
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 3.5e-07 58.2 79 48.1
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 4.5e-07 57.8 76 40.8
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 5.9e-07 57.4 78 41.0
Haze_06807 Corylus avellana HOM05D007037 ORTHO05D006691 1.3e-06 56.2 79 62.0
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 1.7e-06 55.8 79 45.6
Cfa000214 Carpinus fangiana HOM05D007037 ORTHO05D006691 1.7e-06 55.8 78 61.5
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 1.7e-06 55.8 78 38.5
vmacro15807 Vaccinium macrocarpon HOM05D007037 ORTHO05D006691 1.7e-06 55.8 88 60.2
PGSC0003DMG400016450 Solanum tuberosum HOM05D007037 ORTHO05D006691 2.9e-06 55.1 82 40.2


User provided reference genes

Program Settings