Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.2e-210 735.3 365 100.0
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 8.8e-167 590.5 361 80.6
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 1.3e-162 576.6 356 80.9
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 7.8e-155 550.8 369 75.3
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 4.4e-150 535.0 361 74.8
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 1.6e-147 526.6 361 70.9
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 6.0e-147 524.6 357 72.8
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.3e-146 522.7 362 71.3
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 3.9e-146 521.9 355 72.7
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 8.6e-146 520.8 357 72.8
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 1.5e-145 520.0 362 72.1
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 1.9e-145 519.6 354 73.2
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 2.5e-145 519.2 355 71.8
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 3.3e-145 518.8 355 73.0
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 7.3e-145 517.7 355 70.4
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 9.5e-145 517.3 348 74.1
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 1.6e-144 516.5 362 70.4
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 2.8e-144 515.8 355 70.7
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.8e-144 515.8 362 72.4
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 4.7e-144 515.0 364 69.8
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.1e-143 513.8 361 69.5
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 8.9e-143 510.8 354 72.3
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-142 510.4 362 70.2
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 2.6e-142 509.2 362 70.4
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.6e-142 509.2 362 69.3
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 2.6e-142 509.2 361 69.5
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 9.8e-142 507.3 362 69.1
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.7e-141 506.5 355 71.3
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 2.2e-141 506.1 362 69.1
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 1.1e-140 503.8 364 67.0
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 1.9e-140 503.1 362 67.4
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.9e-140 503.1 362 68.2
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 2.4e-140 502.7 361 67.9
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 3.2e-140 502.3 362 68.8
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 7.1e-140 501.1 362 69.1
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 2.1e-139 499.6 362 67.4
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 6.0e-139 498.0 360 70.0
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 1.0e-138 497.3 353 67.7
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.3e-138 496.9 366 65.8
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 1.7e-138 496.5 342 70.5
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 2.3e-138 496.1 364 67.6
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.1e-138 495.0 359 67.7
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.1e-138 495.0 359 67.7
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 8.6e-138 494.2 378 65.3
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 8.6e-138 494.2 364 67.3
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.1e-137 493.8 364 67.3
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 5.6e-137 491.5 364 66.5
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 7.3e-137 491.1 360 67.8
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.1e-136 489.6 329 73.3
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.8e-136 489.2 360 66.9
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.8e-136 489.2 355 68.2
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 3.6e-136 488.8 355 67.3
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 3.6e-136 488.8 357 66.1
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 4.7e-136 488.4 364 66.2
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 8.1e-136 487.6 361 66.2
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.1e-135 487.3 360 68.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 1.1e-135 487.3 360 66.7
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.1e-135 487.3 373 65.4
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.4e-135 486.9 363 66.1
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 5.2e-135 485.0 361 64.8
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 6.8e-135 484.6 360 66.9
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 2.0e-134 483.0 374 65.0
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.4e-134 482.3 362 66.6
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 9.9e-134 480.7 360 66.4
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 9.9e-134 480.7 360 66.4
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 9.9e-134 480.7 338 71.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 1.3e-133 480.3 360 66.4
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 1.7e-133 479.9 356 66.9
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.7e-133 479.9 360 66.7
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 3.7e-133 478.8 354 66.9
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 8.3e-133 477.6 356 65.4
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.1e-132 477.2 359 66.6
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.4e-132 476.1 356 66.9
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 3.2e-132 475.7 355 65.9
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 9.2e-132 474.2 361 67.0
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 2.7e-131 472.6 361 64.3
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 4.6e-131 471.9 362 67.7
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 6.0e-131 471.5 360 65.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 6.6e-130 468.0 355 65.4
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 8.6e-130 467.6 356 66.3
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.3e-129 465.7 397 63.2
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.6e-129 464.9 357 65.8
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 7.3e-129 464.5 357 65.8
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 3.6e-128 462.2 353 62.3
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 4.7e-128 461.8 364 62.4
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.0e-126 456.4 340 67.4
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 3.4e-126 455.7 362 59.9
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.3e-125 453.8 335 66.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 2.9e-125 452.6 433 56.1
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 1.9e-124 449.9 357 64.1
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.4e-124 449.5 356 63.5
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 3.2e-124 449.1 324 68.2
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 7.8e-123 444.5 356 63.5
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 2.3e-122 443.0 313 70.3
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 6.6e-122 441.4 353 60.3
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 5.6e-121 438.3 340 63.2
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.4e-119 433.0 306 69.9
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 6.9e-119 431.4 418 54.8
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 6.9e-119 431.4 287 71.8
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.7e-117 426.8 353 60.6
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 2.2e-117 426.4 289 73.4
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.6e-115 420.2 316 67.1
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 6.6e-114 414.8 309 68.0
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 6.9e-111 404.8 276 73.6
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 4.5e-110 402.1 358 57.3
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 4.9e-109 398.7 275 73.5
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 6.2e-104 381.7 305 66.2
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.7e-101 373.6 353 53.8
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 1.3e-98 364.0 353 53.5
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 5.7e-97 358.6 258 70.5
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.8e-95 353.6 251 70.5
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.5e-94 350.5 332 56.9
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 8.7e-90 334.7 268 61.9
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 4.6e-83 312.4 354 46.3
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 1.4e-82 310.8 314 50.3
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 3.5e-70 269.6 454 34.8
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-64 249.6 356 46.3
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 2.3e-58 230.3 354 38.7
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 3.5e-54 216.5 177 67.2
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.9e-53 213.4 356 38.2
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.4e-50 204.5 270 47.8
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 9.2e-47 191.8 212 55.2
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-45 188.0 242 50.0
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-44 183.3 182 59.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 1.0e-42 178.3 182 58.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 3.9e-37 159.8 243 44.9
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.9e-32 143.7 112 58.0
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.0e-21 108.6 105 53.3
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 8.6e-21 105.5 204 37.3
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 2.7e-14 84.0 176 36.9
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 3.0e-13 80.5 64 57.8
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 5.1e-13 79.7 63 57.1
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 6.8e-10 69.3 197 25.9
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 2.6e-09 67.4 83 44.6
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 9.9e-09 65.5 35 82.9


User provided reference genes

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