Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01219 Erythranthe guttata HOM05D007269 ORTHO05D008531 2.6e-119 432.2 233 100.0
MSTRG.7284 Avicennia marina HOM05D007269 ORTHO05D008531 3.8e-38 162.5 231 51.1
Migut.K01007 Erythranthe guttata HOM05D007269 ORTHO05D008531 7.4e-34 148.3 232 48.7
Oeu001328.1 Olea europaea HOM05D007269 ORTHO05D008531 2.4e-24 116.7 265 40.0
Thecc.02G201200 Theobroma cacao HOM05D007269 ORTHO05D008531 1.2e-23 114.4 239 39.3
Oeu001326.1 Olea europaea HOM05D007269 ORTHO05D008531 8.5e-22 108.2 216 39.4
Oeu001327.1 Olea europaea HOM05D007269 ORTHO05D008531 8.5e-22 108.2 216 39.4
QL03p051584 Quercus lobata HOM05D007269 ORTHO05D008531 3.6e-20 102.8 236 37.7
CSS0016059 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 4.7e-20 102.4 231 39.8
CiPaw.05G106700 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.7e-20 102.4 244 36.5
RcHm_v2.0_Chr4g0429751 Rosa chinensis HOM05D007269 ORTHO05D008531 8.0e-20 101.7 235 37.0
Cc11_g17250 Coffea canephora HOM05D007269 ORTHO05D008531 1.5e-18 97.4 241 32.8
PGR119G1209 Punica granatum HOM05D007269 ORTHO05D008531 1.5e-18 97.4 228 38.2
CiPaw.06G105600 Carya illinoinensis HOM05D007269 ORTHO05D008531 4.4e-18 95.9 232 36.2
Potri.001G059800 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.4e-18 95.9 228 36.0
Sabra12G0074700 Salix brachista HOM05D001095 ORTHO05D000976 5.7e-18 95.5 234 36.8
Manes.13G008500 Manihot esculenta HOM05D007269 ORTHO05D008531 1.7e-17 94.0 226 34.1
Potri.012G101800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.7e-17 94.0 231 38.1
Ciclev10032794m.g Citrus clementina HOM05D007269 ORTHO05D008531 6.3e-17 92.0 227 33.5
Aqoxy5G03286 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 1.1e-16 91.3 231 35.5
Potri.015G099800 Populus trichocarpa HOM05D007269 ORTHO05D008531 1.1e-16 91.3 231 38.5
CANSAT01G1989 Cannabis sativa HOM05D007269 ORTHO05D008531 1.4e-16 90.9 231 37.2
MD16G1123500 Malus domestica HOM05D007269 ORTHO05D008531 1.4e-16 90.9 238 34.0
Aqoxy3G01626 Aquilegia oxysepala HOM05D007269 ORTHO05D008531 7.0e-16 88.6 241 32.0
Nn4g22252 Nelumbo nucifera HOM05D007269 ORTHO05D008531 1.2e-15 87.8 228 34.6
CSS0011599 Camellia sinensis var. sinensis HOM05D007269 ORTHO05D008531 1.6e-15 87.4 231 36.8
TAR374G0918 Trochodendron aralioides HOM05D007269 ORTHO05D008531 5.9e-15 85.5 121 49.6
FvH4_4g23360 Fragaria vesca HOM05D007269 ORTHO05D008531 1.7e-14 84.0 248 35.1
Manes.12G008000 Manihot esculenta HOM05D007269 ORTHO05D008531 2.9e-14 83.2 232 34.5
Atru.chr6.1845 Acer truncatum HOM05D007269 ORTHO05D008531 5.0e-14 82.4 222 33.8
Oeu012652.1 Olea europaea HOM05D007269 ORTHO05D008531 6.5e-14 82.0 170 35.9
Thecc.03G133000 Theobroma cacao HOM05D007269 ORTHO05D008531 1.1e-13 81.3 229 34.5
Prupe.1G222200 Prunus persica HOM05D007269 ORTHO05D008531 1.9e-13 80.5 230 33.9
ATR0582G094 Amborella trichopoda HOM05D007269 ORTHO05D008531 2.5e-13 80.1 229 34.5
Nn3g16393 Nelumbo nucifera HOM05D007269 ORTHO05D008531 2.5e-13 80.1 231 35.5
Sabra03G0123300 Salix brachista HOM05D007269 ORTHO05D008531 2.5e-13 80.1 231 32.9
Sabra15G0120500 Salix brachista HOM05D007269 ORTHO05D008531 3.6e-12 76.3 228 34.6
Potri.003G168200 Populus trichocarpa HOM05D007269 ORTHO05D008531 4.7e-12 75.9 146 37.0
COL.COLO4_36213 Corchorus olitorius HOM05D007269 ORTHO05D008531 1.4e-11 74.3 230 32.2
QL10p002347 Quercus lobata HOM05D007269 ORTHO05D008531 1.8e-11 73.9 230 34.8
CiPaw.11G004900 Carya illinoinensis HOM05D007269 ORTHO05D008531 3.0e-11 73.2 230 36.5
Ciclev10032833m.g Citrus clementina HOM05D007269 ORTHO05D008531 3.0e-11 73.2 226 35.4
Manes.14G048800 Manihot esculenta HOM05D007269 ORTHO05D008531 6.7e-11 72.0 234 34.6
FAN12G4201 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.2e-10 71.2 245 33.1
Duzib084G1105 Durio zibethinus HOM05D007269 ORTHO05D008531 1.5e-10 70.9 232 33.6
Lsat_1_v5_gn_4_82360 Lactuca sativa HOM05D007269 ORTHO05D008531 3.3e-10 69.7 233 32.2
FAN17G1902 Fragaria x ananassa HOM05D007269 ORTHO05D008531 4.4e-10 69.3 230 32.6
PSO017G6998 Papaver somniferum HOM05D007269 ORTHO05D008531 4.4e-10 69.3 231 32.9
Dinv23173 Davidia involucrata HOM05D007269 ORTHO05D008531 9.7e-10 68.2 163 38.0
TAR622G0366 Trochodendron aralioides HOM05D007269 ORTHO05D008531 1.3e-09 67.8 197 35.0
Duzib068G0517 Durio zibethinus HOM05D007269 ORTHO05D008531 4.8e-09 65.9 230 32.2
Gorai.008G207700 Gossypium raimondii HOM05D007269 ORTHO05D008531 1.8e-08 63.9 223 32.3
Gohir.D12G192900 Gossypium hirsutum HOM05D007269 ORTHO05D008531 2.4e-08 63.5 224 31.7
HanXRQChr05g0153821 Helianthus annuus HOM05D007269 ORTHO05D008531 2.4e-08 63.5 243 30.5
Lalb_Chr07g0183561 Lupinus albus HOM05D007269 ORTHO05D008531 3.1e-08 63.2 227 33.5
Gohir.A12G190800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 5.3e-08 62.4 223 33.2
Nitab4.5_0000021g1020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 5.3e-08 62.4 250 30.4
MBI07_g46909_MAGBIO Magnolia biondii HOM05D007269 ORTHO05D008531 9.1e-08 61.6 240 29.2
CDE05G2305 Ceratophyllum demersum HOM05D007269 ORTHO05D008531 1.2e-07 61.2 220 26.8
Gorai.002G023300 Gossypium raimondii HOM05D007269 ORTHO05D008531 2.0e-07 60.5 262 27.1
HanXRQChr08g0236471 Helianthus annuus HOM05D007269 ORTHO05D008531 2.0e-07 60.5 228 30.3
HanXRQChr09g0273431 Helianthus annuus HOM05D007269 ORTHO05D008531 2.0e-07 60.5 226 29.6
FAN08G0669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 2.7e-07 60.1 232 30.6
Nitab4.5_0002530g0020 Nicotiana tabacum HOM05D007269 ORTHO05D008531 2.7e-07 60.1 230 31.3
FAN28G2669 Fragaria x ananassa HOM05D007269 ORTHO05D008531 3.5e-07 59.7 235 30.6
Gohir.D01G020800 Gossypium hirsutum HOM05D007269 ORTHO05D008531 4.5e-07 59.3 266 27.8
Lj4g0016206 Lotus japonicus HOM05D007269 ORTHO05D008531 4.5e-07 59.3 230 29.1
Cfa009391 Carpinus fangiana HOM05D007269 ORTHO05D008531 5.9e-07 58.9 181 30.4
FvH4_5g08680 Fragaria vesca HOM05D007269 ORTHO05D008531 1.0e-06 58.2 235 30.6
FAN18G2199 Fragaria x ananassa HOM05D007269 ORTHO05D008531 1.0e-06 58.2 235 30.6
CsaV3_6G008060 Cucumis sativus L. HOM05D026927 ORTHO05D008531 1.7e-06 57.4 228 30.3
Rhsim12G0023500 Rhododendron simsii HOM05D007269 ORTHO05D008531 1.7e-06 57.4 186 31.2
Sc22g0003750 Simmondsia chinensis HOM05D007269 ORTHO05D008531 2.2e-06 57.0 97 42.3
Psat7g036960 Pisum sativum HOM05D007269 ORTHO05D008531 3.8e-06 56.2 224 29.5
FAN06G3947 Fragaria x ananassa HOM05D007269 ORTHO05D008531 5.0e-06 55.8 226 30.5
TAR629G3154 Trochodendron aralioides HOM05D007269 ORTHO05D008531 8.5e-06 55.1 151 33.8


User provided reference genes

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