Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.7e-106 389.4 202 100.0
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 6.6e-55 218.0 221 60.2
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 6.4e-50 201.4 226 55.8
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 2.5e-46 189.5 231 53.7
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 6.6e-39 164.9 225 48.4
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 3.2e-33 146.0 229 45.0
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 5.4e-33 145.2 229 46.3
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 5.4e-33 145.2 225 45.3
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 5.1e-31 138.7 212 48.1
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 5.6e-30 135.2 265 42.3
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 1.3e-29 134.0 239 40.6
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 3.6e-29 132.5 254 41.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 6.2e-29 131.7 258 39.9
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 8.1e-29 131.3 257 39.7
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.4e-28 130.6 275 37.1
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.4e-28 129.8 227 42.7
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 2.4e-28 129.8 223 44.4
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 3.1e-28 129.4 251 41.0
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 4.0e-28 129.0 238 43.3
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 5.3e-28 128.6 251 41.0
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 5.3e-28 128.6 281 37.4
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 5.3e-28 128.6 127 61.4
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 6.9e-28 128.3 258 40.3
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 1.2e-27 127.5 242 40.5
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 1.2e-27 127.5 235 40.0
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 1.5e-27 127.1 191 48.2
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.5e-27 127.1 258 40.7
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 2.0e-27 126.7 242 40.1
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 2.0e-27 126.7 224 44.6
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 3.4e-27 125.9 245 40.4
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 9.9e-27 124.4 246 42.3
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 3.8e-26 122.5 240 39.2
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 8.4e-26 121.3 240 40.4
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 1.1e-25 120.9 278 36.0
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 1.1e-25 120.9 252 39.7
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.9e-25 120.2 242 40.5
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 2.4e-25 119.8 245 39.2
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.2e-25 119.4 253 38.3
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 9.3e-25 117.9 255 38.4
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 9.3e-25 117.9 248 39.1
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 1.2e-24 117.5 253 39.1
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 1.6e-24 117.1 246 40.2
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 2.1e-24 116.7 251 38.2
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 2.1e-24 116.7 211 45.0
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 3.5e-24 115.9 239 41.0
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 4.6e-24 115.5 202 46.5
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 6.0e-24 115.2 228 42.5
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 6.0e-24 115.2 234 40.6
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 7.9e-24 114.8 235 39.1
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 7.9e-24 114.8 229 39.3
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 1.0e-23 114.4 253 37.2
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.0e-23 114.4 213 40.8
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 1.0e-23 114.4 234 38.9
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 1.8e-23 113.6 265 38.5
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 2.3e-23 113.2 253 37.9
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.3e-23 113.2 249 36.5
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 2.3e-23 113.2 222 40.1
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 3.0e-23 112.8 212 44.3
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.9e-23 112.5 123 55.3
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 3.9e-23 112.5 233 39.9
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 6.7e-23 111.7 214 41.1
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 8.7e-23 111.3 252 36.5
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 8.7e-23 111.3 252 36.5
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.9e-22 110.2 246 37.8
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 1.9e-22 110.2 254 37.0
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 2.5e-22 109.8 136 50.7
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 9.6e-22 107.8 255 40.8
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 1.6e-21 107.1 224 36.6
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 3.7e-21 105.9 239 35.6
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 6.2e-21 105.1 240 38.3
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 8.1e-21 104.8 226 38.5
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.4e-20 103.2 227 38.8
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 3.1e-20 102.8 227 38.8
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.3e-20 102.1 227 38.3
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 9.0e-20 101.3 275 32.0
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.2e-19 100.9 200 40.0
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 2.0e-19 100.1 115 60.9
Sabra04G0019900 Salix brachista HOM05D006486 ORTHO05D007888 7.6e-19 98.2 242 37.6
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 1.7e-18 97.1 223 39.5
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 2.2e-18 96.7 221 35.7
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 3.8e-18 95.9 243 36.2
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 3.2e-17 92.8 118 50.0
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 4.2e-17 92.4 125 49.6
MELO3C007322.2 Cucumis melo HOM05D006486 ORTHO05D007888 5.5e-17 92.0 211 38.9
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 9.3e-17 91.3 129 48.8
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 2.1e-16 90.1 231 36.4
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 2.1e-16 90.1 286 32.2
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 2.7e-16 89.7 124 46.0
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 3.5e-16 89.4 165 41.8
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 7.9e-16 88.2 199 37.7
DCAR_004139 Daucus carota HOM05D006486 ORTHO05D007888 1.0e-15 87.8 122 42.6
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 1.3e-15 87.4 226 36.7
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.0e-15 86.3 242 35.5
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.9e-15 85.9 197 38.1
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 8.7e-15 84.7 236 36.4
unitig_37.g12336 Utricularia gibba HOM05D006486 ORTHO05D007888 1.9e-14 83.6 187 36.4
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 2.5e-14 83.2 234 35.5
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 2.5e-14 83.2 232 34.5
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 4.3e-14 82.4 232 35.3
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 4.3e-14 82.4 123 44.7
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 7.4e-14 81.6 128 41.4
Thhalv10026096m.g Eutrema salsugineum HOM05D006486 ORTHO05D007888 2.1e-13 80.1 247 33.6
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 2.8e-13 79.7 80 58.8
Sp7g19620 Schrenkiella parvula HOM05D006486 ORTHO05D007888 6.2e-13 78.6 238 34.5
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 8.2e-13 78.2 122 44.3
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 1.1e-12 77.8 236 33.9
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.1e-12 76.3 227 34.4
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 9.0e-12 74.7 227 34.8
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 1.5e-11 73.9 128 41.4
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 3.4e-11 72.8 120 45.8
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 4.5e-11 72.4 228 35.1
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.3e-10 70.9 209 39.2
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.3e-10 70.9 209 39.2
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.3e-10 70.9 201 36.8
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 1.7e-10 70.5 119 44.5
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 1.4e-09 67.4 298 29.5
Oeu001396.1 Olea europaea HOM05D045950 ORTHO05D007888 3.2e-09 66.2 65 52.3
Oeu001394.1 Olea europaea HOM05D045950 ORTHO05D007888 5.5e-09 65.5 65 52.3
Ah.14g088910 Amaranthus hybridus HOM05D000873 ORTHO05D001654 1.6e-08 63.9 98 48.0
Ah.09g236140 Amaranthus hybridus HOM05D006486 ORTHO05D007888 9.7e-06 54.7 124 37.9
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 9.7e-06 54.7 128 36.7


User provided reference genes

Program Settings