Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01155 Erythranthe guttata HOM05D005665 ORTHO05D007230 1.6e-199 699.1 335 100.0
MSTRG.7328 Avicennia marina HOM05D005665 ORTHO05D007230 1.9e-176 622.5 335 87.8
Nitab4.5_0004775g0030 Nicotiana tabacum HOM05D005665 ORTHO05D007230 6.2e-175 617.5 336 86.6
SGA_v2.0_scaffold22G09724 Striga asiatica HOM05D005665 ORTHO05D007230 6.2e-175 617.5 335 86.9
Peaxi162Scf00461g00010 Petunia axillaris HOM05D005665 ORTHO05D007230 3.1e-174 615.1 335 86.6
Nitab4.5_0013250g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.5e-173 612.8 335 87.2
Peaxi162Scf00530g00218 Petunia axillaris HOM05D005665 ORTHO05D007230 1.5e-173 612.8 336 87.5
Nitab4.5_0003942g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 2.6e-173 612.1 335 86.9
PGSC0003DMG400022827 Solanum tuberosum HOM05D005665 ORTHO05D007230 1.3e-172 609.8 336 86.6
Solyc10g009030.4 Solanum lycopersicum HOM05D005665 ORTHO05D007230 2.2e-172 609.0 336 86.6
Actinidia01890 Actinidia chinensis HOM05D005665 ORTHO05D007230 2.9e-172 608.6 324 88.6
Sopen10g004810 Solanum pennellii HOM05D005665 ORTHO05D007230 4.9e-172 607.8 336 86.6
SalBow7G1156 Salvia bowleyana HOM05D005665 ORTHO05D007230 1.1e-171 606.7 335 85.4
Dinv07542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.9e-171 605.9 325 87.1
Nitab4.5_0005615g0050 Nicotiana tabacum HOM05D005665 ORTHO05D007230 1.9e-171 605.9 333 85.9
Lj2A287T49 Lonicera japonica HOM05D005665 ORTHO05D007230 3.2e-171 605.1 321 86.6
Actinidia05618 Actinidia chinensis HOM05D005665 ORTHO05D007230 1.7e-169 599.4 318 88.7
CiPaw.10G047200 Carya illinoinensis HOM05D005665 ORTHO05D007230 1.5e-168 596.3 318 87.7
Oeu053967.2 Olea europaea HOM05D005665 ORTHO05D007230 1.5e-168 596.3 337 85.2
Cfa000422 Carpinus fangiana HOM05D005665 ORTHO05D007230 2.5e-168 595.5 329 85.4
TWI38G1053 Tripterygium wilfordii HOM05D005665 ORTHO05D007230 3.3e-168 595.1 332 84.3
QL05p039803 Quercus lobata HOM05D005665 ORTHO05D007230 1.3e-167 593.2 328 85.4
ClCG03G005940 Citrullus lanatus HOM05D005665 ORTHO05D007230 1.6e-167 592.8 314 87.6
Prupe.4G044600 Prunus persica HOM05D005665 ORTHO05D007230 2.1e-167 592.4 329 85.7
Aqoxy4G01024 Aquilegia oxysepala HOM05D005665 ORTHO05D007230 3.6e-167 591.7 323 83.9
Cpa.g.sc27.60 Carica papaya HOM05D005665 ORTHO05D007230 3.6e-167 591.7 326 84.7
Os02g0639600 Oryza sativa ssp. japonica HOM05D005665 ORTHO05D007230 8.1e-167 590.5 324 85.2
TAR627G0371 Trochodendron aralioides HOM05D005665 ORTHO05D007230 8.1e-167 590.5 327 85.6
CsaV3_1G012180 Cucumis sativus L. HOM05D005665 ORTHO05D007230 1.1e-166 590.1 314 86.9
PSO210G3809 Papaver somniferum HOM05D005665 ORTHO05D007230 1.4e-166 589.7 323 84.8
PSO832G3519 Papaver somniferum HOM05D005665 ORTHO05D007230 1.4e-166 589.7 323 84.8
Hma1.2p1_0126F.1_g059290 Hydrangea macrophylla HOM05D005665 ORTHO05D007230 2.4e-166 589.0 322 86.3
CSS0000582 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 4.0e-166 588.2 315 86.3
Duzib192G0757 Durio zibethinus HOM05D005665 ORTHO05D007230 4.0e-166 588.2 326 83.7
Nn1g04043 Nelumbo nucifera HOM05D005665 ORTHO05D007230 4.0e-166 588.2 321 85.4
MELO3C002591.2 Cucumis melo HOM05D005665 ORTHO05D007230 1.2e-165 586.6 313 86.6
FAN25G3768 Fragaria x ananassa HOM05D005665 ORTHO05D007230 2.9e-164 582.0 322 85.1
RcHm_v2.0_Chr5g0008091 Rosa chinensis HOM05D005665 ORTHO05D007230 3.8e-164 581.6 326 84.7
Sed0027057 Sechium edule HOM05D005665 ORTHO05D007230 3.8e-164 581.6 327 84.1
Duzib160G0567 Durio zibethinus HOM05D005665 ORTHO05D007230 6.4e-164 580.9 325 83.7
TAR626G1890 Trochodendron aralioides HOM05D005665 ORTHO05D007230 8.4e-164 580.5 329 83.6
FAN21G3875 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.1e-163 580.1 322 84.5
Gohir.A10G024500 Gossypium hirsutum HOM05D005665 ORTHO05D007230 1.1e-163 580.1 330 82.4
Thecc.06G190100 Theobroma cacao HOM05D005665 ORTHO05D007230 1.1e-163 580.1 327 83.8
Eucgr.E03124 Eucalyptus grandis HOM05D005665 ORTHO05D007230 1.4e-163 579.7 326 84.0
Manes.16G026000 Manihot esculenta HOM05D005665 ORTHO05D007230 1.9e-163 579.3 335 82.4
Cc02_g13170 Coffea canephora HOM05D005665 ORTHO05D007230 3.2e-163 578.6 319 83.7
Manes.17G043900 Manihot esculenta HOM05D005665 ORTHO05D007230 4.2e-163 578.2 325 83.4
Sabra11G0034800 Salix brachista HOM05D005665 ORTHO05D007230 4.2e-163 578.2 326 82.8
Potri.011G050800 Populus trichocarpa HOM05D005665 ORTHO05D007230 5.4e-163 577.8 326 83.1
MD10G1295900 Malus domestica HOM05D005665 ORTHO05D007230 7.1e-163 577.4 319 85.9
FvH4_3g04930 Fragaria vesca HOM05D005665 ORTHO05D007230 9.3e-163 577.0 322 84.5
FAN11G2254 Fragaria x ananassa HOM05D005665 ORTHO05D007230 9.3e-163 577.0 322 84.5
Gorai.011G026500 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.2e-162 576.6 330 82.1
GSVIVG01002020001 Vitis vinifera HOM05D005665 ORTHO05D007230 1.6e-162 576.2 319 85.6
CiPaw.09G058000 Carya illinoinensis HOM05D005665 ORTHO05D007230 2.1e-162 575.9 316 84.5
Atru.chr10.1913 Acer truncatum HOM05D005665 ORTHO05D007230 2.7e-162 575.5 326 82.8
Gohir.D06G131200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 4.6e-162 574.7 327 82.3
Gohir.A06G126400 Gossypium hirsutum HOM05D005665 ORTHO05D007230 6.0e-162 574.3 325 82.5
Gorai.010G153100 Gossypium raimondii HOM05D005665 ORTHO05D007230 1.0e-161 573.5 322 82.9
Nn1g06596 Nelumbo nucifera HOM05D005665 ORTHO05D007230 1.0e-161 573.5 327 81.7
FAN16G3723 Fragaria x ananassa HOM05D005665 ORTHO05D007230 1.3e-161 573.2 322 84.2
Gohir.D10G025200 Gossypium hirsutum HOM05D005665 ORTHO05D007230 3.0e-161 572.0 321 83.2
PGR042G0011 Punica granatum HOM05D005665 ORTHO05D007230 5.1e-161 571.2 333 82.0
THA.LOC104806290 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 6.7e-161 570.9 335 80.3
Sed0024618 Sechium edule HOM05D005665 ORTHO05D007230 8.7e-161 570.5 327 82.3
CANSAT35G1141 Cannabis sativa HOM05D005665 ORTHO05D007230 1.1e-160 570.1 324 84.9
Lalb_Chr18g0059701 Lupinus albus HOM05D005665 ORTHO05D007230 1.5e-160 569.7 326 83.4
ClCG01G022870 Citrullus lanatus HOM05D005665 ORTHO05D007230 9.6e-160 567.0 328 81.7
THA.LOC104812890 Tarenaya hassleriana HOM05D005665 ORTHO05D007230 9.6e-160 567.0 333 80.8
Haze_06494 Corylus avellana HOM05D005665 ORTHO05D007230 1.6e-159 566.2 387 72.1
Thhalv10028789m.g Eutrema salsugineum HOM05D005665 ORTHO05D007230 2.1e-159 565.8 325 81.5
Ciclev10015896m.g Citrus clementina HOM05D005665 ORTHO05D007230 4.8e-159 564.7 331 80.7
AUR62016991 Chenopodium quinoa HOM05D005665 ORTHO05D007230 6.2e-159 564.3 331 81.9
AUR62014800 Chenopodium quinoa HOM05D005665 ORTHO05D007230 8.1e-159 563.9 325 82.8
BolC9t56129H Brassica oleracea HOM05D005665 ORTHO05D007230 1.1e-158 563.5 336 79.8
A09p25970 Brassica napus HOM05D005665 ORTHO05D007230 1.8e-158 562.8 336 79.8
BraA09t38164Z Brassica rapa HOM05D005665 ORTHO05D007230 1.8e-158 562.8 336 79.8
Sc05g0007780 Simmondsia chinensis HOM05D005665 ORTHO05D007230 1.8e-158 562.8 326 81.3
ATR0680G322 Amborella trichopoda HOM05D005665 ORTHO05D007230 2.4e-158 562.4 321 80.4
Lj6g0021271 Lotus japonicus HOM05D005665 ORTHO05D007230 2.4e-158 562.4 320 82.8
TPR.G36824 Trifolium pratense HOM05D005665 ORTHO05D007230 2.4e-158 562.4 318 82.1
MBI18_g16999_MAGBIO Magnolia biondii HOM05D005665 ORTHO05D007230 3.1e-158 562.0 334 79.9
Carub.0006s3285 Capsella rubella HOM05D005665 ORTHO05D007230 5.3e-158 561.2 334 79.0
Sp6g04030 Schrenkiella parvula HOM05D005665 ORTHO05D007230 9.0e-158 560.5 333 79.6
SpUn0051_0010 Schrenkiella parvula HOM05D005665 ORTHO05D007230 9.0e-158 560.5 333 79.6
Zm00001eb075800 Zea mays HOM05D005665 ORTHO05D007230 5.8e-157 557.8 318 80.8
EL10Ac8g20360 Beta vulgaris HOM05D005665 ORTHO05D007230 1.3e-156 556.6 319 82.1
BcaC04g21346 Brassica carinata HOM05D005665 ORTHO05D007230 2.9e-156 555.4 336 78.6
C09p32940 Brassica napus HOM05D005665 ORTHO05D007230 2.9e-156 555.4 336 78.6
Medtr2g013070 Medicago truncatula HOM05D005665 ORTHO05D007230 6.4e-156 554.3 321 81.3
Glyma.15G072800 Glycine max HOM05D005665 ORTHO05D007230 8.4e-156 553.9 320 80.0
AT4G04930 Arabidopsis thaliana HOM05D005665 ORTHO05D007230 1.4e-155 553.1 325 80.0
Ca_00306_v3 Cicer arietinum L. HOM05D005665 ORTHO05D007230 2.4e-155 552.4 310 82.6
BcaB01g01848 Brassica carinata HOM05D005665 ORTHO05D007230 1.6e-154 549.7 335 78.5
COL.COLO4_31496 Corchorus olitorius HOM05D005665 ORTHO05D007230 1.6e-154 549.7 302 85.1
VMungo0540G1872 Vigna mungo HOM05D005665 ORTHO05D007230 3.0e-153 545.4 322 80.1
arahy.Tifrunner.gnm1.ann1.5IXZ6F Arachis hypogaea HOM05D005665 ORTHO05D007230 5.6e-152 541.2 333 77.5
Psat1g206640 Pisum sativum HOM05D005665 ORTHO05D007230 9.6e-152 540.4 322 79.5
Aa31LG9G9560 Aethionema arabicum HOM05D005665 ORTHO05D007230 1.3e-151 540.0 325 77.8
arahy.Tifrunner.gnm1.ann1.C923ZL Arachis hypogaea HOM05D005665 ORTHO05D007230 1.6e-151 539.7 333 77.2
Glyma.13G240700 Glycine max HOM05D005665 ORTHO05D007230 2.8e-151 538.9 320 77.8
Phvul.006G187100 Phaseolus vulgaris HOM05D005665 ORTHO05D007230 8.1e-151 537.3 322 78.6
SHI01876 Sapria himalayana HOM05D005665 ORTHO05D007230 1.5e-149 533.1 353 73.7
Nitab4.5_0002158g0010 Nicotiana tabacum HOM05D005665 ORTHO05D007230 3.8e-148 528.5 316 80.4
SEGI_10058 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 3.5e-146 521.9 319 75.5
HPP92_021012 Vanilla planifolia HOM05D005665 ORTHO05D007230 7.9e-146 520.8 322 75.8
Ah.09g237240 Amaranthus hybridus HOM05D005665 ORTHO05D007230 1.8e-145 519.6 303 80.5
Lsat_1_v5_gn_1_126041 Lactuca sativa HOM05D005665 ORTHO05D007230 4.3e-144 515.0 314 76.4
CAN.G413.22 Capsicum annuum HOM05D005665 ORTHO05D007230 8.2e-143 510.8 278 86.3
Eucgr.L02776 Eucalyptus grandis HOM05D005665 ORTHO05D007230 6.9e-142 507.7 279 83.9
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 2.2e-140 502.7 308 74.7
RhsimUnG0044900 Rhododendron simsii HOM05D005665 ORTHO05D007230 1.0e-137 493.8 279 82.1
Mapoly0083s0054 Marchantia polymorpha HOM05D005665 ORTHO05D007230 4.8e-135 485.0 321 70.1
Pp3c23_19370 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.6e-130 468.8 315 68.9
Pp3c23_19371 Physcomitrium patens HOM05D005665 ORTHO05D007230 3.6e-130 468.8 315 68.9
MD05G1314600 Malus domestica HOM05D005665 ORTHO05D007230 7.4e-128 461.1 332 69.9
SMO364G0702 Selaginella moellendorffii HOM05D005665 ORTHO05D007230 9.7e-128 460.7 328 64.6
AagrBONN_evm.TU.Sc2ySwM_344.2491 Anthoceros agrestis HOM05D005665 ORTHO05D007230 3.7e-127 458.8 308 68.8
DCAR_004082 Daucus carota HOM05D005665 ORTHO05D007230 8.5e-124 447.6 251 80.9
CSS0037689 Camellia sinensis var. sinensis HOM05D005665 ORTHO05D007230 7.7e-117 424.5 229 87.8
AagrBONN_evm.TU.Sc2ySwM_344.2084 Anthoceros agrestis HOM05D005665 ORTHO05D007230 5.5e-115 418.3 306 61.8
MCO04G319 Micromonas commoda HOM05D005665 ORTHO05D007230 1.8e-102 376.7 332 56.6
CDE02G1299 Ceratophyllum demersum HOM05D005665 ORTHO05D007230 4.5e-101 372.1 252 69.4
unitig_21.g20852 Utricularia gibba HOM05D005665 ORTHO05D007230 5.7e-96 355.1 215 78.1
PRCOL_00001033 Prasinoderma coloniale HOM05D005665 ORTHO05D007230 2.9e-87 326.2 314 50.6
Cfa021982 Carpinus fangiana HOM05D005665 ORTHO05D007230 4.3e-83 312.4 350 44.6
Haze_26717 Corylus avellana HOM05D005665 ORTHO05D007230 1.7e-71 273.9 360 41.1
Thecc.05G195100 Theobroma cacao HOM05D005665 ORTHO05D007230 8.4e-55 218.4 123 78.0
Dinv40542 Davidia involucrata HOM05D005665 ORTHO05D007230 1.3e-31 141.4 82 82.9
MELO3C007292.2 Cucumis melo HOM05D005665 ORTHO05D039877 1.6e-29 134.4 89 75.3
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.2e-21 108.2 80 70.0
BcaB05g23333 Brassica carinata HOM05D005665 ORTHO05D039877 3.7e-18 96.7 68 69.1
Zm00001eb175420 Zea mays HOM05D005665 ORTHO05D007230 9.4e-14 82.0 47 78.7
Thecc.05G194800 Theobroma cacao HOM05D005665 ORTHO05D007230 1.6e-13 81.3 52 73.1
DCAR_004083 Daucus carota HOM05D000799 ORTHO05D000629 2.1e-13 80.9 56 66.1
Zm00001eb423550 Zea mays HOM05D005665 ORTHO05D007230 2.3e-12 77.4 41 82.9
SEGI_41581 Sequoiadendron giganteum HOM05D005665 ORTHO05D007230 5.0e-07 59.7 45 55.6


User provided reference genes

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