Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 1.7e-52 209.1 113 100.0
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 5.2e-41 171.0 113 82.3
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.5e-35 152.9 106 79.2
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 4.7e-34 147.9 112 75.9
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.0e-33 145.2 108 75.0
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 1.2e-32 143.3 105 75.2
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.2e-32 143.3 108 71.3
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 7.5e-32 140.6 113 69.9
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.2e-31 139.0 113 70.8
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 2.4e-30 135.6 100 75.0
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.4e-30 135.6 114 67.5
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 5.4e-30 134.4 103 71.8
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 5.4e-30 134.4 108 68.5
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 7.0e-30 134.0 108 70.4
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 9.2e-30 133.7 108 69.4
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 3.5e-29 131.7 113 65.5
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 3.5e-29 131.7 115 64.3
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.5e-29 131.3 109 63.3
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 4.5e-29 131.3 103 69.9
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 5.9e-29 131.0 109 66.1
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 5.9e-29 131.0 103 68.9
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 7.8e-29 130.6 113 67.3
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 7.8e-29 130.6 112 67.0
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.0e-28 130.2 103 68.9
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 1.3e-28 129.8 113 63.7
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 1.7e-28 129.4 95 71.6
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 1.7e-28 129.4 112 66.1
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 2.3e-28 129.0 113 61.9
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 2.3e-28 129.0 113 61.9
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.3e-28 129.0 106 71.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 2.3e-28 129.0 95 72.6
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 5.0e-28 127.9 100 69.0
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 6.6e-28 127.5 113 66.4
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 8.6e-28 127.1 107 68.2
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 1.1e-27 126.7 111 65.8
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.1e-27 126.7 92 77.2
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 1.5e-27 126.3 92 75.0
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 1.5e-27 126.3 92 76.1
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 2.5e-27 125.6 92 77.2
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 2.5e-27 125.6 88 78.4
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 4.3e-27 124.8 99 70.7
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 5.6e-27 124.4 103 66.0
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 5.6e-27 124.4 103 66.0
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 5.6e-27 124.4 103 66.0
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 5.6e-27 124.4 108 64.8
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 5.6e-27 124.4 98 68.4
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 7.3e-27 124.0 88 77.3
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 7.3e-27 124.0 88 76.1
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 7.3e-27 124.0 103 68.0
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.6e-26 122.9 99 69.7
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.1e-26 122.5 104 65.4
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 2.8e-26 122.1 99 67.7
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 2.8e-26 122.1 103 67.0
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 3.6e-26 121.7 95 68.4
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 6.1e-26 120.9 103 61.2
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 8.0e-26 120.6 108 64.8
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 1.0e-25 120.2 103 63.1
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 1.4e-25 119.8 104 62.5
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 3.0e-25 118.6 113 61.9
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 3.0e-25 118.6 99 65.7
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 4.0e-25 118.2 99 65.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 5.2e-25 117.9 95 68.4
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 5.2e-25 117.9 113 61.9
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 6.8e-25 117.5 96 64.6
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.2e-24 116.7 96 63.5
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.2e-24 116.7 99 66.7
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 2.0e-24 115.9 103 60.2
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 4.4e-24 114.8 102 61.8
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 4.4e-24 114.8 102 61.8
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 5.7e-24 114.4 96 62.5
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 5.7e-24 114.4 96 62.5
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-23 112.8 96 62.5
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 2.2e-23 112.5 103 60.2
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 2.9e-23 112.1 102 60.8
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 2.9e-23 112.1 103 61.2
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 6.4e-23 110.9 102 59.8
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 6.4e-23 110.9 110 57.3
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 6.4e-23 110.9 101 61.4
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 8.3e-23 110.5 104 62.5
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 3.2e-22 108.6 96 59.4
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 5.4e-22 107.8 106 59.4
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 4.6e-21 104.8 97 61.9
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 7.8e-21 104.0 105 56.2
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 7.8e-21 104.0 111 54.1
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.0e-20 103.6 71 83.1
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-20 102.8 120 52.5
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 6.6e-20 100.9 82 69.5
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 8.6e-20 100.5 79 69.6
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 8.6e-20 100.5 152 44.1
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.5e-19 99.8 96 56.2
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.9e-19 99.4 89 57.3
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.3e-19 98.6 122 49.2
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 3.3e-19 98.6 75 69.3
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 4.3e-19 98.2 77 68.8
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 1.2e-18 96.7 75 72.0
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 4.0e-17 91.7 96 52.1
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 5.8e-16 87.8 75 60.0
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 7.5e-16 87.4 69 68.1
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 1.1e-14 83.6 89 57.3
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 1.2e-13 80.1 115 42.6
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 5.6e-11 71.2 103 42.7
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 1.2e-10 70.1 94 43.6
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 2.6e-08 62.4 92 42.4
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 2.2e-07 59.3 94 42.6
SEGI_39568 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 2.4e-06 55.8 55 50.9


User provided reference genes

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