Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M01008 Erythranthe guttata HOM05D005059 ORTHO05D004248 9.8e-43 176.4 90 100.0
MSTRG.13233 Avicennia marina HOM05D005059 ORTHO05D004248 1.0e-15 86.7 91 60.4
Oeu060173.1 Olea europaea HOM05D005059 ORTHO05D004248 4.3e-14 81.3 91 56.0
Lsat_1_v5_gn_7_25601 Lactuca sativa HOM05D005059 ORTHO05D004248 1.2e-13 79.7 90 54.4
Migut.H01411 Erythranthe guttata HOM05D005059 ORTHO05D004248 1.6e-13 79.3 92 53.3
CAN.G411.50 Capsicum annuum HOM05D005059 ORTHO05D004248 3.6e-13 78.2 80 60.0
Oeu060178.1 Olea europaea HOM05D005059 ORTHO05D004248 3.6e-13 78.2 90 54.4
Rhsim13G0187800 Rhododendron simsii HOM05D005059 ORTHO05D004248 4.7e-13 77.8 98 49.0
SalBow7G3765 Salvia bowleyana HOM05D005059 ORTHO05D004248 6.2e-13 77.4 90 56.7
Sopen02g021130 Solanum pennellii HOM05D005059 ORTHO05D004248 8.1e-13 77.0 80 58.8
Potri.004G061300 Populus trichocarpa HOM05D005059 ORTHO05D004248 2.4e-12 75.5 99 47.5
Phvul.002G241108 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 1.5e-11 72.8 99 47.5
Cc02_g15600 Coffea canephora HOM05D005059 ORTHO05D004248 2.0e-11 72.4 96 51.0
Oeu040922.1 Olea europaea HOM05D005059 ORTHO05D004248 3.4e-11 71.6 92 52.2
PGSC0003DMG400028485 Solanum tuberosum HOM05D005059 ORTHO05D004248 5.8e-11 70.9 92 48.9
Haze_06169 Corylus avellana HOM05D005059 ORTHO05D004248 9.9e-11 70.1 91 47.3
QL05p049931 Quercus lobata HOM05D005059 ORTHO05D004248 1.3e-10 69.7 90 47.8
Sabra11G0055200 Salix brachista HOM05D005059 ORTHO05D004248 1.3e-10 69.7 94 46.8
CiPaw.09G073100 Carya illinoinensis HOM05D005059 ORTHO05D004248 2.2e-10 68.9 92 48.9
Manes.17G059300 Manihot esculenta HOM05D005059 ORTHO05D004248 2.2e-10 68.9 94 43.6
Oeu043118.1 Olea europaea HOM05D005059 ORTHO05D004248 2.9e-10 68.6 92 48.9
CSS0038855 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 3.8e-10 68.2 93 47.3
Potri.011G070500 Populus trichocarpa HOM05D005059 ORTHO05D004248 4.9e-10 67.8 97 45.4
COL.COLO4_31233 Corchorus olitorius HOM05D005059 ORTHO05D004248 6.4e-10 67.4 104 44.2
RcHm_v2.0_Chr5g0011661 Rosa chinensis HOM05D005059 ORTHO05D004248 6.4e-10 67.4 94 45.7
Manes.16G042800 Manihot esculenta HOM05D005059 ORTHO05D004248 8.4e-10 67.0 93 46.2
FAN21G0043 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.1e-09 66.6 92 44.6
FAN25G1124 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.1e-09 66.6 92 44.6
FAN11G2282 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.4e-09 66.2 94 45.7
FAN16G0464 Fragaria x ananassa HOM05D005059 ORTHO05D004248 1.4e-09 66.2 92 44.6
Hma1.2p1_0113F.1_g055120 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 1.4e-09 66.2 91 47.3
Sabra04G0040600 Salix brachista HOM05D005059 ORTHO05D004248 1.4e-09 66.2 99 43.4
SalBow8G0022 Salvia bowleyana HOM05D005059 ORTHO05D004248 1.9e-09 65.9 52 65.4
Ciclev10018148m.g Citrus clementina HOM05D005059 ORTHO05D004248 2.4e-09 65.5 104 45.2
FvH4_3g07300 Fragaria vesca HOM05D005059 ORTHO05D004248 2.4e-09 65.5 93 45.2
Glyma.08G118500 Glycine max HOM05D005059 ORTHO05D004248 2.4e-09 65.5 99 45.5
MBI06_g16696_MAGBIO Magnolia biondii HOM05D005059 ORTHO05D004248 2.4e-09 65.5 92 50.0
BcaB03g13892 Brassica carinata HOM05D005059 ORTHO05D004248 3.2e-09 65.1 99 41.4
Dinv12752 Davidia involucrata HOM05D005059 ORTHO05D004248 3.2e-09 65.1 56 64.3
DCAR_027980 Daucus carota HOM05D005059 ORTHO05D004248 4.2e-09 64.7 93 43.0
Atru.chr10.1568 Acer truncatum HOM05D005059 ORTHO05D004248 5.4e-09 64.3 87 47.1
DCAR_005145 Daucus carota HOM05D005059 ORTHO05D004248 5.4e-09 64.3 100 45.0
Thecc.06G165400 Theobroma cacao HOM05D005059 ORTHO05D004248 7.1e-09 63.9 101 44.6
Lj6g0009726 Lotus japonicus HOM05D005059 ORTHO05D004248 9.3e-09 63.5 99 44.4
Medtr8g087390 Medicago truncatula HOM05D005059 ORTHO05D004248 9.3e-09 63.5 93 40.9
TAR626G0600 Trochodendron aralioides HOM05D005059 ORTHO05D004248 9.3e-09 63.5 93 46.2
MSTRG.7430 Avicennia marina HOM05D005059 ORTHO05D004248 1.2e-08 63.2 93 45.2
CSS0000215 Camellia sinensis var. sinensis HOM05D005059 ORTHO05D004248 1.6e-08 62.8 95 48.4
CARHR028610 Cardamine hirsuta HOM05D005059 ORTHO05D004248 1.6e-08 62.8 96 40.6
Cfa000656 Carpinus fangiana HOM05D005059 ORTHO05D004248 1.6e-08 62.8 101 46.5
Glyma.05G161100 Glycine max HOM05D005059 ORTHO05D004248 2.1e-08 62.4 75 50.7
TWI53G1149 Tripterygium wilfordii HOM05D005059 ORTHO05D004248 2.1e-08 62.4 91 44.0
AL1G43080 Arabidopsis lyrata HOM05D005059 ORTHO05D004248 2.7e-08 62.0 50 62.0
Dinv32337 Davidia involucrata HOM05D005059 ORTHO05D004248 2.7e-08 62.0 87 47.1
AT1G29290 Arabidopsis thaliana HOM05D005059 ORTHO05D004248 3.5e-08 61.6 50 62.0
BcaC05g26955 Brassica carinata HOM05D005059 ORTHO05D004248 4.6e-08 61.2 50 62.0
C05p28050 Brassica napus HOM05D005059 ORTHO05D004248 4.6e-08 61.2 50 62.0
BolC5t31533H Brassica oleracea HOM05D005059 ORTHO05D004248 4.6e-08 61.2 50 62.0
TPR.G6728 Trifolium pratense HOM05D005059 ORTHO05D004248 4.6e-08 61.2 96 43.8
A09p37060 Brassica napus HOM05D005059 ORTHO05D004248 6.0e-08 60.8 96 39.6
BraA09t39221Z Brassica rapa HOM05D005059 ORTHO05D004248 6.0e-08 60.8 96 39.6
CiPaw.10G061800 Carya illinoinensis HOM05D005059 ORTHO05D004248 6.0e-08 60.8 93 46.2
Thhalv10009585m.g Eutrema salsugineum HOM05D005059 ORTHO05D004248 6.0e-08 60.8 50 62.0
PGR042G3020 Punica granatum HOM05D005059 ORTHO05D004248 6.0e-08 60.8 102 40.2
BcaB07g32517 Brassica carinata HOM05D005059 ORTHO05D004248 7.8e-08 60.5 50 62.0
BcaC06g35423 Brassica carinata HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 41.0
A07p10740 Brassica napus HOM05D005059 ORTHO05D004248 7.8e-08 60.5 99 39.4
C07p16340 Brassica napus HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 41.0
BolC7t42128H Brassica oleracea HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 41.0
BraA07t28869Z Brassica rapa HOM05D005059 ORTHO05D004248 7.8e-08 60.5 99 39.4
Gohir.A05G153400 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 43.0
Gohir.D05G156000 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 43.0
Gorai.009G160500 Gossypium raimondii HOM05D005059 ORTHO05D004248 7.8e-08 60.5 100 43.0
Prupe.4G067000 Prunus persica HOM05D005059 ORTHO05D004248 7.8e-08 60.5 91 45.1
Rhsim13G0187700 Rhododendron simsii HOM05D005059 ORTHO05D004248 7.8e-08 60.5 92 45.7
Psat7g068640 Pisum sativum HOM05D005059 ORTHO05D004248 1.0e-07 60.1 101 37.6
Dinv18371 Davidia involucrata HOM05D000126 ORTHO05D000085 1.3e-07 59.7 90 42.2
Sp1g25220 Schrenkiella parvula HOM05D005059 ORTHO05D004248 1.3e-07 59.7 96 41.7
TAR627G0439 Trochodendron aralioides HOM05D005059 ORTHO05D004248 1.3e-07 59.7 98 41.8
arahy.Tifrunner.gnm1.ann1.YXRF57 Arachis hypogaea HOM05D005059 ORTHO05D004248 1.7e-07 59.3 94 40.4
MD00G1009200 Malus domestica HOM05D005059 ORTHO05D004248 2.3e-07 58.9 99 43.4
MD00G1221100 Malus domestica HOM05D005059 ORTHO05D004248 2.3e-07 58.9 99 43.4
BcaB03g12151 Brassica carinata HOM05D005059 ORTHO05D004248 3.0e-07 58.5 50 60.0
TAR624G0872 Trochodendron aralioides HOM05D005059 ORTHO05D004248 3.0e-07 58.5 91 42.9
Lj4g0014521 Lotus japonicus HOM05D005059 ORTHO05D004248 3.9e-07 58.2 91 44.0
Lalb_Chr15g0086331 Lupinus albus HOM05D005059 ORTHO05D004248 3.9e-07 58.2 80 43.8
AUR62039479 Chenopodium quinoa HOM05D005059 ORTHO05D004248 5.1e-07 57.8 83 47.0
Nitab4.5_0000788g0070 Nicotiana tabacum HOM05D005059 ORTHO05D004248 5.1e-07 57.8 90 38.9
TAR624G0770 Trochodendron aralioides HOM05D005059 ORTHO05D004248 5.1e-07 57.8 52 53.8
MD10G1275500 Malus domestica HOM05D005059 ORTHO05D004248 6.6e-07 57.4 94 44.7
SGA_v2.0_scaffold1G00085 Striga asiatica HOM05D005059 ORTHO05D004248 6.6e-07 57.4 95 41.1
Carub.0001s2751 Capsella rubella HOM05D005059 ORTHO05D004248 8.7e-07 57.0 51 58.8
DCAR_027979 Daucus carota HOM05D005059 ORTHO05D004248 8.7e-07 57.0 107 39.3
arahy.Tifrunner.gnm1.ann1.YNVN02 Arachis hypogaea HOM05D005059 ORTHO05D004248 1.1e-06 56.6 100 39.0
Medtr2g016800 Medicago truncatula HOM05D005059 ORTHO05D004248 1.1e-06 56.6 96 40.6
Nitab4.5_0006663g0010 Nicotiana tabacum HOM05D005059 ORTHO05D004248 1.5e-06 56.2 97 40.2
Gorai.010G161500 Gossypium raimondii HOM05D005059 ORTHO05D004248 1.9e-06 55.8 99 41.4
Nn6g34461 Nelumbo nucifera HOM05D005059 ORTHO05D004248 2.5e-06 55.5 91 37.4
Phvul.006G173000 Phaseolus vulgaris HOM05D005059 ORTHO05D004248 2.5e-06 55.5 95 38.9
BcaC01g00093 Brassica carinata HOM05D005059 ORTHO05D004248 3.3e-06 55.1 50 58.0
A08p25180 Brassica napus HOM05D005059 ORTHO05D004248 3.3e-06 55.1 50 58.0
C03p75700 Brassica napus HOM05D005059 ORTHO05D004248 3.3e-06 55.1 50 58.0
BolC3t19830H Brassica oleracea HOM05D005059 ORTHO05D004248 3.3e-06 55.1 50 58.0
BraA08t34472Z Brassica rapa HOM05D005059 ORTHO05D004248 3.3e-06 55.1 50 58.0
Glyma.13G226600 Glycine max HOM05D005059 ORTHO05D004248 3.3e-06 55.1 93 41.9
BraA08t35043Z Brassica rapa HOM05D009829 ORTHO05D012418 4.3e-06 54.7 52 55.8
Ca_00473_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 4.3e-06 54.7 92 40.2
Ca_17896_v3 Cicer arietinum L. HOM05D005059 ORTHO05D004248 4.3e-06 54.7 92 35.9
BcaB03g13023 Brassica carinata HOM05D009829 ORTHO05D012418 5.6e-06 54.3 91 39.6
ClCG01G023900 Citrullus lanatus HOM05D005059 ORTHO05D004248 5.6e-06 54.3 46 56.5
Thhalv10009335m.g Eutrema salsugineum HOM05D009829 ORTHO05D012418 5.6e-06 54.3 95 37.9
Sed0013946 Sechium edule HOM05D005059 ORTHO05D004248 5.6e-06 54.3 64 48.4
Aqoxy4G00224 Aquilegia oxysepala HOM05D005059 ORTHO05D004248 7.3e-06 53.9 93 37.6
Gohir.D06G138900 Gossypium hirsutum HOM05D005059 ORTHO05D004248 7.3e-06 53.9 99 41.4
Hma1.2p1_0373F.1_g138420 Hydrangea macrophylla HOM05D005059 ORTHO05D004248 7.3e-06 53.9 66 50.0


User provided reference genes

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