Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00965 Erythranthe guttata HOM05D010243 ORTHO05D012264 6.5e-31 136.7 68 100.0
Migut.D00632 Erythranthe guttata HOM05D010243 ORTHO05D012264 8.8e-12 73.2 50 76.0
Carub.0004s1877 Capsella rubella HOM05D010243 ORTHO05D012264 1.3e-10 69.3 49 73.5
Os02g0189700 Oryza sativa ssp. japonica HOM05D010243 ORTHO05D012264 3.7e-10 67.8 49 73.5
SGA_v2.0_scaffold59G20676 Striga asiatica HOM05D010243 ORTHO05D012264 6.3e-10 67.0 49 67.3
Migut.J00653 Erythranthe guttata HOM05D010243 ORTHO05D012264 1.4e-09 65.9 49 71.4
Carub.0005s0741 Capsella rubella HOM05D010243 ORTHO05D012264 1.8e-09 65.5 49 67.3
Nitab4.5_0006969g0020 Nicotiana tabacum HOM05D010243 ORTHO05D012264 4.1e-09 64.3 49 67.3
Solyc03g122060.3 Solanum lycopersicum HOM05D010243 ORTHO05D012264 9.1e-09 63.2 55 63.6
Lsat_1_v5_gn_0_9661 Lactuca sativa HOM05D003018 ORTHO05D003402 1.6e-08 62.4 49 69.4
MELO3C031016.2 Cucumis melo HOM05D010243 ORTHO05D012264 3.5e-08 61.2 49 67.3
Lsat_1_v5_gn_1_28641 Lactuca sativa HOM05D000464 ORTHO05D006292 3.5e-08 61.2 41 70.7
Solyc11g150103.1 Solanum lycopersicum HOM05D009060 ORTHO05D011398 3.5e-08 61.2 48 68.8
HanXRQChr08g0208451 Helianthus annuus HOM05D010243 ORTHO05D012264 1.3e-07 59.3 67 53.7
SGA_v2.0_scaffold198G41086 Striga asiatica HOM05D010243 ORTHO05D012264 2.3e-07 58.5 50 60.0
Nitab4.5_0002072g0010 Nicotiana tabacum HOM05D010243 ORTHO05D012264 2.9e-07 58.2 49 63.3
FAN03G1987 Fragaria x ananassa HOM05D010243 ORTHO05D012264 3.8e-07 57.8 49 67.3
Peaxi162Scf00231g00919 Petunia axillaris HOM05D010243 ORTHO05D012264 5.0e-07 57.4 47 63.8
Oeu004355.1 Olea europaea HOM05D010243 ORTHO05D012264 1.1e-06 56.2 42 69.0
Nitab4.5_0000115g0220 Nicotiana tabacum HOM05D010243 ORTHO05D012264 1.5e-06 55.8 49 63.3
Peaxi162Scf00323g00823 Petunia axillaris HOM05D034306 ORTHO05D012264 4.2e-06 54.3 35 77.1
Pp3c22_11245 Physcomitrium patens HOM05D010243 ORTHO05D012264 4.2e-06 54.3 49 63.3
Atru.chr8.2430 Acer truncatum HOM05D010243 ORTHO05D012264 7.2e-06 53.5 36 75.0
Migut.I01112 Erythranthe guttata HOM05D010243 ORTHO05D012264 7.2e-06 53.5 43 69.8


User provided reference genes

Program Settings