Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00927 Erythranthe guttata HOM05D006911 ORTHO05D006663 4.8e-42 174.5 116 100.0
Oeu052383.1 Olea europaea HOM05D006911 ORTHO05D006663 2.7e-21 105.5 82 65.9
SalBow6G3836 Salvia bowleyana HOM05D006911 ORTHO05D006663 9.7e-19 97.1 77 63.6
SalBow7G2931 Salvia bowleyana HOM05D006911 ORTHO05D006663 1.7e-18 96.3 77 63.6
Cc09_g08880 Coffea canephora HOM05D006911 ORTHO05D006663 3.8e-15 85.1 58 74.1
Lsat_1_v5_gn_7_7541 Lactuca sativa HOM05D006911 ORTHO05D006663 4.2e-14 81.6 74 58.1
Nn4g26517 Nelumbo nucifera HOM05D006911 ORTHO05D006663 7.2e-14 80.9 57 66.7
Migut.H01374 Erythranthe guttata HOM05D006911 ORTHO05D006663 1.2e-13 80.1 83 54.2
Lsat_1_v5_gn_1_96620 Lactuca sativa HOM05D006911 ORTHO05D006663 1.2e-13 80.1 74 54.1
Nn3g20669 Nelumbo nucifera HOM05D006911 ORTHO05D006663 2.7e-13 79.0 57 63.2
QL05p059038 Quercus lobata HOM05D006911 ORTHO05D006663 1.0e-12 77.0 71 56.3
Gohir.D10G040100 Gossypium hirsutum HOM05D006911 ORTHO05D006663 3.0e-12 75.5 74 54.1
Gorai.011G042200 Gossypium raimondii HOM05D006911 ORTHO05D006663 3.0e-12 75.5 74 54.1
CSS0032663 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 5.2e-12 74.7 70 54.3
Oeu040961.1 Olea europaea HOM05D006911 ORTHO05D006663 5.2e-12 74.7 82 52.4
Thecc.06G153400 Theobroma cacao HOM05D006911 ORTHO05D006663 3.4e-11 72.0 72 54.2
Nitab4.5_0001040g0170 Nicotiana tabacum HOM05D024954 ORTHO05D006663 5.7e-11 71.2 57 59.6
Potri.011G079900 Populus trichocarpa HOM05D006911 ORTHO05D006663 5.7e-11 71.2 70 52.9
Gohir.D06G205000 Gossypium hirsutum HOM05D006911 ORTHO05D006663 7.5e-11 70.9 70 52.9
Gorai.010G239100 Gossypium raimondii HOM05D006911 ORTHO05D006663 9.8e-11 70.5 70 52.9
COL.COLO4_24713 Corchorus olitorius HOM05D006911 ORTHO05D006663 1.3e-10 70.1 57 56.1
Gohir.A10G039300 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.3e-10 70.1 74 51.4
Solyc02g070820.1 Solanum lycopersicum HOM05D024954 ORTHO05D006663 1.3e-10 70.1 57 61.4
Sopen02g019930 Solanum pennellii HOM05D024954 ORTHO05D018132 1.3e-10 70.1 57 61.4
Gohir.A06G197500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.2e-10 69.3 70 52.9
Potri.004G131200 Populus trichocarpa HOM05D006911 ORTHO05D006663 2.8e-10 68.9 71 52.1
Gohir.D05G152400 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.8e-10 68.2 57 57.9
Ciclev10017350m.g Citrus clementina HOM05D006911 ORTHO05D006663 6.3e-10 67.8 58 62.1
COL.COLO4_38300 Corchorus olitorius HOM05D006911 ORTHO05D006663 8.3e-10 67.4 57 56.1
PGSC0003DMG400008315 Solanum tuberosum HOM05D024954 ORTHO05D018132 8.3e-10 67.4 57 57.9
CSS0014266 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.4e-09 66.6 58 60.3
CSS0033096 Camellia sinensis var. sinensis HOM05D006911 ORTHO05D006663 1.4e-09 66.6 58 60.3
ClCG03G007000 Citrullus lanatus HOM05D006911 ORTHO05D006663 1.4e-09 66.6 48 66.7
Gohir.A05G149800 Gossypium hirsutum HOM05D006911 ORTHO05D006663 1.4e-09 66.6 57 56.1
Potri.005G203800 Populus trichocarpa HOM05D006911 ORTHO05D006663 1.4e-09 66.6 56 51.8
Hma1.2p1_0137F.1_g062460 Hydrangea macrophylla HOM05D006911 ORTHO05D006663 1.8e-09 66.2 54 61.1
ATR0585G110 Amborella trichopoda HOM05D006911 ORTHO05D006663 3.1e-09 65.5 62 53.2
Medtr5g091310 Medicago truncatula HOM05D006911 ORTHO05D006663 4.1e-09 65.1 56 53.6
Thecc.01G170800 Theobroma cacao HOM05D006911 ORTHO05D006663 5.4e-09 64.7 61 50.8
Ciclev10033778m.g Citrus clementina HOM05D006911 ORTHO05D006663 7.0e-09 64.3 57 54.4
Potri.002G058400 Populus trichocarpa HOM05D006911 ORTHO05D006663 7.0e-09 64.3 62 46.8
TWI09G0032 Tripterygium wilfordii HOM05D006911 ORTHO05D006663 7.0e-09 64.3 57 54.4
Manes.07G101802 Manihot esculenta HOM05D006911 ORTHO05D006663 9.1e-09 63.9 56 53.6
RcHm_v2.0_Chr2g0151771 Rosa chinensis HOM05D006911 ORTHO05D006663 9.1e-09 63.9 56 62.5
CiPaw.09G126200 Carya illinoinensis HOM05D006911 ORTHO05D006663 1.6e-08 63.2 48 64.6
Eucgr.A02012 Eucalyptus grandis HOM05D006911 ORTHO05D006663 2.7e-08 62.4 61 55.7
FvH4_6g38520 Fragaria vesca HOM05D006911 ORTHO05D006663 2.7e-08 62.4 56 60.7
FAN02G1638 Fragaria x ananassa HOM05D006911 ORTHO05D006663 2.7e-08 62.4 56 60.7
FAN14G5866 Fragaria x ananassa HOM05D006911 ORTHO05D006663 2.7e-08 62.4 56 60.7
THA.LOC104806122 Tarenaya hassleriana HOM05D010376 ORTHO05D006663 3.5e-08 62.0 72 50.0
LjContig00049g0014504 Lotus japonicus HOM05D006911 ORTHO05D006663 4.5e-08 61.6 73 49.3
COL.COLO4_07174 Corchorus olitorius HOM05D006911 ORTHO05D006663 5.9e-08 61.2 61 47.5
Duzib133G0070 Durio zibethinus HOM05D006911 ORTHO05D006663 5.9e-08 61.2 61 49.2
Manes.15G119700 Manihot esculenta HOM05D006911 ORTHO05D006663 7.7e-08 60.8 48 64.6
PSO541G4839 Papaver somniferum HOM05D006911 ORTHO05D006663 1.3e-07 60.1 54 51.9
Gorai.009G156500 Gossypium raimondii HOM05D006911 ORTHO05D006663 1.7e-07 59.7 53 54.7
Cfa023065 Carpinus fangiana HOM05D006911 ORTHO05D006663 2.3e-07 59.3 56 55.4
Haze_13522 Corylus avellana HOM05D006911 ORTHO05D006663 2.3e-07 59.3 56 55.4
MBI10_g27413_MAGBIO Magnolia biondii HOM05D006911 ORTHO05D006663 2.9e-07 58.9 45 64.4
QL08p044828 Quercus lobata HOM05D006911 ORTHO05D006663 3.8e-07 58.5 43 65.1
C05p04730 Brassica napus HOM05D006911 ORTHO05D006663 6.6e-07 57.8 50 52.0
BolC5t29245H Brassica oleracea HOM05D006911 ORTHO05D006663 6.6e-07 57.8 50 52.0
Cpa.g.sc50.102 Carica papaya HOM05D006911 ORTHO05D006663 6.6e-07 57.8 58 50.0
Sed0015743 Sechium edule HOM05D006911 ORTHO05D006663 6.6e-07 57.8 92 42.4
THA.LOC104800829 Tarenaya hassleriana HOM05D006911 ORTHO05D006663 6.6e-07 57.8 55 43.6
Sp1g05240 Schrenkiella parvula HOM05D006911 ORTHO05D006663 1.1e-06 57.0 52 53.8
Sed0000672 Sechium edule HOM05D006911 ORTHO05D006663 1.1e-06 57.0 45 62.2
BraA10t42779Z Brassica rapa HOM05D006911 ORTHO05D006663 1.5e-06 56.6 50 52.0
Manes.17G067900 Manihot esculenta HOM05D006911 ORTHO05D006663 1.5e-06 56.6 42 64.3
arahy.Tifrunner.gnm1.ann1.M9VZ51 Arachis hypogaea HOM05D006911 ORTHO05D006663 1.9e-06 56.2 53 56.6
MD17G1137200 Malus domestica HOM05D006911 ORTHO05D006663 1.9e-06 56.2 63 46.0
arahy.Tifrunner.gnm1.ann1.A53T08 Arachis hypogaea HOM05D006911 ORTHO05D006663 2.5e-06 55.8 53 56.6
BcaB02g06798 Brassica carinata HOM05D006911 ORTHO05D006663 2.5e-06 55.8 50 52.0
CiPaw.04G139200 Carya illinoinensis HOM05D006911 ORTHO05D006663 2.5e-06 55.8 55 49.1
Glyma.14G029400 Glycine max HOM05D006911 ORTHO05D006663 2.5e-06 55.8 54 55.6
Gohir.D11G163600 Gossypium hirsutum HOM05D006911 ORTHO05D006663 2.5e-06 55.8 54 48.1
Gorai.007G174300 Gossypium raimondii HOM05D006911 ORTHO05D006663 2.5e-06 55.8 54 48.1
Lj6g0027673 Lotus japonicus HOM05D006911 ORTHO05D006663 2.5e-06 55.8 42 64.3
MD09G1150000 Malus domestica HOM05D006911 ORTHO05D006663 3.3e-06 55.5 56 53.6
Phvul.006G031600 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 3.3e-06 55.5 56 51.8
Gohir.A11G156500 Gossypium hirsutum HOM05D006911 ORTHO05D006663 4.2e-06 55.1 51 49.0
Medtr4g094630 Medicago truncatula HOM05D006911 ORTHO05D006663 4.2e-06 55.1 51 54.9
Phvul.008G193200 Phaseolus vulgaris HOM05D006911 ORTHO05D006663 4.2e-06 55.1 54 55.6
Thhalv10009210m.g Eutrema salsugineum HOM05D006911 ORTHO05D006663 7.2e-06 54.3 50 50.0


User provided reference genes

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