Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.4e-36 154.1 76 100.0
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 1.1e-34 149.4 76 96.1
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 2.6e-20 101.7 61 82.0
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 4.4e-20 100.9 74 67.6
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 7.5e-20 100.1 78 66.7
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 9.9e-20 99.8 78 65.4
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.2e-19 98.6 75 66.7
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 4.9e-19 97.4 76 68.4
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 8.3e-19 96.7 78 65.4
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 1.4e-18 95.9 83 62.7
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 1.4e-18 95.9 57 82.5
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 4.1e-18 94.4 81 61.7
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 4.1e-18 94.4 73 67.1
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 9.2e-18 93.2 81 61.7
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 9.2e-18 93.2 71 60.6
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 1.2e-17 92.8 76 65.8
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 1.6e-17 92.4 58 77.6
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 1.6e-17 92.4 79 63.3
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 2.7e-17 91.7 57 73.7
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 2.7e-17 91.7 78 60.3
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 3.5e-17 91.3 59 69.5
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 3.5e-17 91.3 78 61.5
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 4.6e-17 90.9 71 67.6
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 4.6e-17 90.9 71 64.8
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 6.0e-17 90.5 87 56.3
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 6.0e-17 90.5 71 64.8
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 7.8e-17 90.1 60 70.0
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 7.8e-17 90.1 85 60.0
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 7.8e-17 90.1 71 64.8
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 7.8e-17 90.1 78 62.8
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 7.8e-17 90.1 72 63.9
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 1.0e-16 89.7 79 59.5
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.3e-16 89.4 79 59.5
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 1.3e-16 89.4 79 62.0
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.7e-16 89.0 79 60.8
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 1.7e-16 89.0 83 59.0
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 1.7e-16 89.0 84 58.3
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 1.7e-16 89.0 74 62.2
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.7e-16 89.0 78 62.8
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 1.7e-16 89.0 65 66.2
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 2.3e-16 88.6 72 61.1
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 2.3e-16 88.6 86 58.1
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 2.3e-16 88.6 57 70.2
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 2.3e-16 88.6 83 62.7
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 3.0e-16 88.2 78 60.3
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 3.0e-16 88.2 62 61.3
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 3.0e-16 88.2 85 60.0
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 3.0e-16 88.2 60 68.3
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 3.0e-16 88.2 58 74.1
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 3.9e-16 87.8 57 75.4
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 3.9e-16 87.8 58 72.4
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 5.1e-16 87.4 86 59.3
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 5.1e-16 87.4 86 59.3
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 5.1e-16 87.4 86 59.3
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 5.1e-16 87.4 86 59.3
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 5.1e-16 87.4 80 60.0
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 5.1e-16 87.4 85 60.0
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 5.1e-16 87.4 88 56.8
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 6.6e-16 87.0 77 62.3
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 6.6e-16 87.0 62 67.7
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 8.6e-16 86.7 81 55.6
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 8.6e-16 86.7 60 70.0
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 8.6e-16 86.7 60 68.3
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 8.6e-16 86.7 57 73.7
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 1.1e-15 86.3 57 71.9
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 1.1e-15 86.3 76 57.9
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.5e-15 85.9 68 66.2
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 1.9e-15 85.5 86 50.0
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 1.9e-15 85.5 82 54.9
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 2.5e-15 85.1 60 68.3
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 2.5e-15 85.1 60 66.7
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 2.5e-15 85.1 59 69.5
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 5.6e-15 84.0 74 55.4
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 7.3e-15 83.6 48 79.2
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 7.3e-15 83.6 63 66.7
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 7.3e-15 83.6 59 67.8
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 9.5e-15 83.2 59 66.1
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 9.5e-15 83.2 59 67.8
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 9.5e-15 83.2 57 70.2
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 9.5e-15 83.2 79 59.5
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 1.6e-14 82.4 85 52.9
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 8.1e-14 80.1 72 55.6
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 1.1e-13 79.7 75 54.7
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 1.8e-13 79.0 62 62.9
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 2.4e-13 78.6 60 60.0
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 3.1e-13 78.2 77 53.2
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 4.0e-13 77.8 68 55.9
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 5.2e-13 77.4 46 76.1
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 6.8e-13 77.0 46 76.1
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 1.5e-12 75.9 49 73.5
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 7.6e-12 73.6 49 69.4
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 2.9e-11 71.6 50 64.0
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 2.4e-10 68.6 49 61.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 2.7e-09 65.1 49 57.1
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 1.9e-07 58.9 55 50.9
Pp3c10_22390 Physcomitrium patens HOM05D007598 ORTHO05D009632 3.6e-06 54.7 51 51.0
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 4.7e-06 54.3 27 81.5
Aqoxy6G00608 Aquilegia oxysepala HOM05D007833 ORTHO05D009855 6.2e-06 53.9 48 52.1


User provided reference genes

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