Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.1e-64 248.8 120 100.0
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 8.5e-42 173.7 100 81.0
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 9.4e-41 170.2 115 71.3
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 6.1e-40 167.5 105 71.4
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 4.4e-38 161.4 93 77.4
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 4.4e-38 161.4 96 78.1
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.7e-37 159.5 117 62.4
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 4.8e-37 157.9 106 70.8
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.2e-37 157.1 117 65.8
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 8.2e-37 157.1 117 65.8
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 1.4e-36 156.4 117 62.4
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 1.4e-36 156.4 117 64.1
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 1.8e-36 156.0 92 72.8
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.8e-36 156.0 102 67.6
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 3.1e-36 155.2 102 67.6
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 5.3e-36 154.5 109 67.0
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 7.0e-36 154.1 109 70.6
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 7.0e-36 154.1 117 63.2
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 2.0e-35 152.5 104 67.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.0e-35 152.5 106 65.1
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 2.6e-35 152.1 118 62.7
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 3.5e-35 151.8 104 68.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 3.5e-35 151.8 102 70.6
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 3.5e-35 151.8 80 86.2
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 4.5e-35 151.4 101 68.3
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 7.7e-35 150.6 116 64.7
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 7.7e-35 150.6 87 78.2
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 1.0e-34 150.2 104 67.3
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 98 70.4
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.7e-34 149.4 89 74.2
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 2.2e-34 149.1 99 69.7
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 2.2e-34 149.1 100 69.0
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.2e-34 149.1 103 70.9
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 3.8e-34 148.3 102 63.7
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 3.8e-34 148.3 92 71.7
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 3.8e-34 148.3 103 67.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 5.0e-34 147.9 102 63.7
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 5.0e-34 147.9 111 62.2
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 6.5e-34 147.5 93 69.9
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 8.5e-34 147.1 90 72.2
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 8.5e-34 147.1 115 62.6
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 8.5e-34 147.1 111 63.1
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 8.5e-34 147.1 98 67.3
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.9e-33 146.0 104 63.5
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 1.9e-33 146.0 102 63.7
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 2.5e-33 145.6 81 79.0
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.5e-33 145.6 116 59.5
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 3.2e-33 145.2 99 66.7
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 4.2e-33 144.8 113 58.4
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 4.2e-33 144.8 113 58.4
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 4.2e-33 144.8 113 58.4
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 4.2e-33 144.8 99 67.7
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 4.2e-33 144.8 111 62.2
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 5.5e-33 144.4 99 66.7
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 5.5e-33 144.4 91 71.4
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 7.2e-33 144.1 113 60.2
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 7.2e-33 144.1 99 68.7
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 7.2e-33 144.1 97 68.0
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 7.2e-33 144.1 98 70.4
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 7.2e-33 144.1 76 84.2
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 9.4e-33 143.7 101 64.4
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 9.4e-33 143.7 101 64.4
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 9.4e-33 143.7 111 62.2
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 9.4e-33 143.7 87 75.9
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.2e-32 143.3 117 60.7
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.2e-32 143.3 92 68.5
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 1.2e-32 143.3 113 60.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 1.2e-32 143.3 113 60.2
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-32 142.9 101 64.4
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.6e-32 142.9 101 64.4
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 2.1e-32 142.5 112 58.9
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 2.1e-32 142.5 120 60.0
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 2.1e-32 142.5 97 67.0
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.7e-32 142.1 97 67.0
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 2.7e-32 142.1 99 63.6
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.6e-32 141.7 118 58.5
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 3.6e-32 141.7 87 72.4
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 4.7e-32 141.4 102 61.8
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 6.1e-32 141.0 102 60.8
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 6.1e-32 141.0 102 60.8
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 6.1e-32 141.0 88 68.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.0e-31 140.2 92 68.5
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.4e-31 139.8 113 58.4
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.4e-31 139.8 98 62.2
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 3.9e-31 138.3 115 61.7
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 2.0e-30 136.0 112 57.1
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.0e-30 136.0 76 81.6
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 2.6e-30 135.6 90 71.1
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 2.8e-29 132.1 79 75.9
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 6.3e-29 131.0 80 71.2
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 2.4e-28 129.0 101 62.4
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.5e-27 124.8 96 61.5
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.0e-26 123.6 106 56.6
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 1.7e-26 122.9 92 58.7
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 2.9e-26 122.1 97 59.8
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 5.5e-25 117.9 91 60.4
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.6e-24 115.2 101 59.4
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 4.7e-24 114.8 90 62.2
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 4.4e-22 108.2 96 59.4
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 4.4e-22 108.2 107 43.9
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 1.7e-21 106.3 108 44.4
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 8.3e-21 104.0 122 44.3
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.8e-18 95.1 87 50.6
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 4.2e-17 91.7 72 61.1
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 5.5e-17 91.3 76 56.6
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 2.8e-13 79.0 125 36.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 1.6e-08 63.2 93 36.6


User provided reference genes

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