Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.4e-229 799.3 400 100.0
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 3.2e-162 575.5 400 73.5
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.2e-143 513.8 398 66.3
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.8e-131 472.2 402 61.4
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 3.0e-128 462.6 402 60.0
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 2.4e-125 453.0 399 60.4
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 7.0e-125 451.4 399 60.7
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.6e-123 444.5 404 59.2
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 3.3e-122 442.6 404 58.7
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 4.3e-122 442.2 402 58.5
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 5.6e-122 441.8 398 58.8
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 8.0e-121 438.0 390 60.0
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 5.4e-117 425.2 393 56.0
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 1.9e-114 416.8 301 68.1
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 7.3e-114 414.8 397 57.9
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 2.8e-113 412.9 397 55.9
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 4.7e-113 412.1 400 55.5
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 8.9e-112 407.9 388 57.0
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 2.6e-111 406.4 363 57.6
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 7.5e-111 404.8 385 56.9
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 6.4e-110 401.7 391 56.3
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 3.2e-109 399.4 398 54.3
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 5.4e-109 398.7 392 55.4
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 5.4e-109 398.7 383 55.4
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 1.2e-108 397.5 390 57.2
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 2.1e-108 396.7 317 62.1
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 2.1e-108 396.7 391 54.2
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.7e-108 396.4 337 59.6
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 6.0e-108 395.2 335 58.2
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 1.0e-107 394.4 382 55.0
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 2.3e-107 393.3 396 53.3
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 3.0e-107 392.9 296 65.2
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 8.6e-107 391.3 380 52.6
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 8.6e-107 391.3 396 54.8
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 2.5e-106 389.8 387 54.0
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 5.6e-106 388.7 391 54.7
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 7.3e-106 388.3 386 55.7
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 7.3e-106 388.3 395 54.4
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 9.5e-106 387.9 361 55.4
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 8.1e-105 384.8 397 53.4
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 1.4e-104 384.0 374 56.7
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.8e-104 383.6 382 53.9
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.0e-103 380.2 392 52.0
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 5.8e-103 378.6 385 52.7
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 1.7e-102 377.1 393 53.2
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 1.7e-102 377.1 294 63.6
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 2.2e-102 376.7 386 53.1
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 2.2e-102 376.7 341 58.7
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 2.9e-102 376.3 403 51.1
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 4.9e-102 375.6 394 54.1
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 4.9e-102 375.6 388 52.6
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 4.9e-102 375.6 292 62.0
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 6.4e-102 375.2 344 57.3
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 6.4e-102 375.2 349 56.2
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 2.4e-101 373.2 313 60.7
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 7.8e-100 368.2 353 56.9
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 1.3e-99 367.5 379 53.6
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 2.3e-99 366.7 327 58.7
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 3.0e-99 366.3 320 57.5
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 8.6e-99 364.8 423 50.1
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.1e-98 364.4 387 53.2
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.5e-98 364.0 328 57.3
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 1.9e-98 363.6 355 55.5
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 9.6e-98 361.3 395 52.7
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 1.2e-97 360.9 392 51.0
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 1.6e-97 360.5 375 52.0
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 2.8e-97 359.8 390 50.8
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 4.7e-97 359.0 328 55.8
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 8.1e-97 358.2 415 47.2
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.1e-96 357.8 369 53.1
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 2.4e-96 356.7 309 56.0
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 3.1e-96 356.3 384 52.1
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 8.9e-96 354.8 322 55.9
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 8.9e-96 354.8 322 55.9
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 1.5e-95 354.0 419 47.3
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.0e-95 353.6 344 56.1
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 2.6e-95 353.2 403 51.6
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 5.8e-95 352.1 382 51.8
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 5.8e-95 352.1 311 58.5
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 9.9e-95 351.3 384 51.6
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 1.7e-94 350.5 375 49.1
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 1.4e-93 347.4 329 55.3
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 1.6e-92 344.0 278 60.8
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 2.1e-92 343.6 360 53.1
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 5.1e-91 339.0 387 48.6
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 4.3e-90 335.9 375 49.9
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.8e-88 330.5 333 50.8
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 5.3e-88 328.9 384 49.5
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.3e-86 324.3 386 48.7
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 2.2e-86 323.6 308 52.9
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 4.9e-86 322.4 361 49.9
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 6.4e-86 322.0 298 55.4
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 2.1e-84 317.0 232 66.8
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 2.7e-84 316.6 397 46.3
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.7e-83 313.9 239 64.4
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 9.9e-79 298.1 341 47.5
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.3e-75 287.0 353 43.3
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-72 277.7 225 59.6
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 5.3e-72 275.8 225 59.6
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 4.5e-71 272.7 403 39.2
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 4.8e-65 252.7 191 67.5
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 9.0e-56 221.9 250 51.6
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 5.5e-53 212.6 170 61.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 1.2e-52 211.5 264 47.3
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 3.7e-49 199.9 180 54.4
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 3.1e-48 196.8 317 36.6
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 5.5e-45 186.0 365 35.1
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 5.5e-45 186.0 190 50.5
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 1.4e-43 181.4 183 54.6
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 6.3e-41 172.6 335 33.4
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 1.1e-40 171.8 148 58.1
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 7.7e-39 165.6 248 38.7
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 1.3e-38 164.9 259 37.5
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.5e-37 161.4 189 46.0
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 8.0e-36 155.6 291 34.0
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 1.4e-35 154.8 262 35.9
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 3.0e-35 153.7 255 36.9
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 2.2e-33 147.5 294 32.3
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 1.1e-32 145.2 146 50.0
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.0e-32 142.5 136 51.5
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 2.0e-31 141.0 142 52.8
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 4.5e-31 139.8 290 32.4
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 3.4e-26 123.6 195 37.9
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.5e-18 98.2 204 31.9
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 1.4e-16 91.7 103 43.7
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 4.0e-11 73.6 87 44.8
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 1.8e-08 64.7 82 45.1


User provided reference genes

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