Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00719 Erythranthe guttata HOM05D008148 ORTHO05D010295 2.4e-27 124.8 63 100.0
SalBow7G3203 Salvia bowleyana HOM05D008148 ORTHO05D010295 3.2e-16 87.8 60 68.3
SalBow6G6640 Salvia bowleyana HOM05D008148 ORTHO05D010295 7.2e-16 86.7 60 71.7
Cc05_g11020 Coffea canephora HOM05D008148 ORTHO05D010295 3.0e-14 81.3 61 62.3
Oeu059259.1 Olea europaea HOM05D008148 ORTHO05D010295 2.5e-13 78.2 59 67.8
SGA_v2.0_scaffold34G13787 Striga asiatica HOM05D008148 ORTHO05D010295 4.3e-13 77.4 50 78.0
CiPaw.11G159800 Carya illinoinensis HOM05D008148 ORTHO05D010295 2.4e-11 71.6 60 63.3
arahy.Tifrunner.gnm1.ann1.MJJR0W Arachis hypogaea HOM05D008148 ORTHO05D010295 2.6e-10 68.2 48 70.8
DCAR_013159 Daucus carota HOM05D008148 ORTHO05D010295 1.0e-09 66.2 50 62.0
Eucgr.F03276 Eucalyptus grandis HOM05D008148 ORTHO05D010295 2.9e-09 64.7 59 55.9
Prupe.4G164100 Prunus persica HOM05D008148 ORTHO05D010295 3.8e-09 64.3 62 51.6
arahy.Tifrunner.gnm1.ann1.GBF3HF Arachis hypogaea HOM05D008148 ORTHO05D010295 6.5e-09 63.5 46 67.4
MD11G1264400 Malus domestica HOM05D008148 ORTHO05D010295 6.5e-09 63.5 61 50.8
unitig_85.g27419 Utricularia gibba HOM05D055015 ORTHO05D010295 8.5e-09 63.2 77 45.5
unitig_86.g29830 Utricularia gibba HOM05D055015 ORTHO05D010295 8.5e-09 63.2 77 45.5
PGR031G2401 Punica granatum HOM05D008148 ORTHO05D010295 1.1e-08 62.8 50 62.0
Migut.H02001 Erythranthe guttata HOM05D008148 ORTHO05D010295 1.9e-08 62.0 46 60.9
Potri.011G109100 Populus trichocarpa HOM05D008148 ORTHO05D010295 1.9e-08 62.0 48 54.2
Sc03g0010550 Simmondsia chinensis HOM05D008148 ORTHO05D010295 1.9e-08 62.0 46 67.4
FAN11G2091 Fragaria x ananassa HOM05D008148 ORTHO05D010295 2.5e-08 61.6 48 64.6
Prupe.4G163600 Prunus persica HOM05D008148 ORTHO05D010295 2.5e-08 61.6 47 59.6
Sabra11G0096700 Salix brachista HOM05D008148 ORTHO05D010295 2.5e-08 61.6 46 58.7
RcHm_v2.0_Chr5g0030781 Rosa chinensis HOM05D008148 ORTHO05D010295 3.2e-08 61.2 52 61.5
TPR.G16053 Trifolium pratense HOM05D008148 ORTHO05D010295 4.2e-08 60.8 47 59.6
Nn1g04456 Nelumbo nucifera HOM05D008148 ORTHO05D010295 5.5e-08 60.5 49 59.2
FAN21G2680 Fragaria x ananassa HOM05D008148 ORTHO05D010295 7.2e-08 60.1 48 62.5
GSVIVG01014187001 Vitis vinifera HOM05D008148 ORTHO05D010295 9.4e-08 59.7 51 54.9
AL1G29090 Arabidopsis lyrata HOM05D008148 ORTHO05D010295 1.2e-07 59.3 42 61.9
AT1G16916 Arabidopsis thaliana HOM05D008148 ORTHO05D010295 1.2e-07 59.3 42 61.9
MELO3C025654.2 Cucumis melo HOM05D008148 ORTHO05D010295 1.2e-07 59.3 47 57.4
Psat5g237240 Pisum sativum HOM05D008148 ORTHO05D010295 1.2e-07 59.3 47 59.6
Thhalv10009282m.g Eutrema salsugineum HOM05D008148 ORTHO05D010295 2.1e-07 58.5 54 46.3
CSS0001630 Camellia sinensis var. sinensis HOM05D008148 ORTHO05D010295 2.7e-07 58.2 46 60.9
Manes.15G095500 Manihot esculenta HOM05D008148 ORTHO05D010295 2.7e-07 58.2 53 56.6
Carub.0001s1665 Capsella rubella HOM05D008148 ORTHO05D010295 3.6e-07 57.8 42 61.9
THA.LOC104812318 Tarenaya hassleriana HOM05D008148 ORTHO05D010295 3.6e-07 57.8 41 63.4
CARHR017420 Cardamine hirsuta HOM05D008148 ORTHO05D010295 4.6e-07 57.4 54 46.3
Atru.chr2.2119 Acer truncatum HOM05D008148 ORTHO05D010295 6.1e-07 57.0 47 55.3
CsaV3_4G032950 Cucumis sativus L. HOM05D008148 ORTHO05D010295 6.1e-07 57.0 58 50.0
Ca_03959_v3 Cicer arietinum L. HOM05D008148 ORTHO05D010295 7.9e-07 56.6 46 56.5
Glyma.13G269300 Glycine max HOM05D008148 ORTHO05D010295 7.9e-07 56.6 48 56.2
Medtr2g076020 Medicago truncatula HOM05D008148 ORTHO05D010295 1.0e-06 56.2 47 57.4
Actinidia12583 Actinidia chinensis HOM05D008148 ORTHO05D010295 1.4e-06 55.8 49 53.1
Lalb_Chr25g0285821 Lupinus albus HOM05D008148 ORTHO05D010295 1.4e-06 55.8 46 54.3
Sp1g15050 Schrenkiella parvula HOM05D008148 ORTHO05D010295 1.4e-06 55.8 38 52.6
BcaC07g41389 Brassica carinata HOM05D008148 ORTHO05D010295 1.8e-06 55.5 54 46.3
C08p44200 Brassica napus HOM05D008148 ORTHO05D010295 1.8e-06 55.5 43 55.8
Cpa.g.sc77.20 Carica papaya HOM05D008148 ORTHO05D010295 1.8e-06 55.5 47 63.8
A09p60700 Brassica napus HOM05D008148 ORTHO05D010295 2.3e-06 55.1 55 45.5
FAN25G0037 Fragaria x ananassa HOM05D008148 ORTHO05D010295 2.3e-06 55.1 51 60.8
Lj3g0020996 Lotus japonicus HOM05D008148 ORTHO05D010295 2.3e-06 55.1 45 57.8
MBI06_g08612_MAGBIO Magnolia biondii HOM05D008148 ORTHO05D010295 3.9e-06 54.3 38 68.4
ClCG11G017320 Citrullus lanatus HOM05D008148 ORTHO05D010295 5.1e-06 53.9 48 54.2
BraA09t41440Z Brassica rapa HOM05D008148 ORTHO05D010295 6.7e-06 53.5 42 54.8


User provided reference genes

Program Settings