Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00689 Erythranthe guttata HOM05D007501 ORTHO05D009528 1.2e-106 389.8 188 100.0
SGA_v2.0_scaffold73G24380 Striga asiatica HOM05D007501 ORTHO05D009528 3.3e-32 142.5 188 50.0
Oeu059251.1 Olea europaea HOM05D007501 ORTHO05D009528 7.3e-32 141.4 171 50.3
Actinidia03620 Actinidia chinensis HOM05D007501 ORTHO05D009528 5.2e-30 135.2 165 47.3
Sopen10g003430 Solanum pennellii HOM05D007501 ORTHO05D009528 1.2e-29 134.0 179 45.3
Solyc10g007490.2 Solanum lycopersicum HOM05D007501 ORTHO05D009528 3.4e-29 132.5 178 44.9
PGSC0003DMG400021255 Solanum tuberosum HOM05D007501 ORTHO05D009528 1.3e-28 130.6 165 46.7
CSS0000849 Camellia sinensis var. sinensis HOM05D007501 ORTHO05D009528 1.7e-28 130.2 169 47.9
RhsimUnG0206300 Rhododendron simsii HOM05D007501 ORTHO05D009528 1.7e-28 130.2 181 46.4
vmacro09418 Vaccinium macrocarpon HOM05D007501 ORTHO05D009528 2.9e-28 129.4 166 48.2
SalBow8G3616 Salvia bowleyana HOM05D007501 ORTHO05D009528 7.1e-27 124.8 161 46.6
Cc05_g10640 Coffea canephora HOM05D007501 ORTHO05D009528 9.2e-27 124.4 185 45.9
MD03G1250700 Malus domestica HOM05D007501 ORTHO05D009528 1.2e-26 124.0 166 47.6
GSVIVG01014087001 Vitis vinifera HOM05D007501 ORTHO05D009528 3.5e-26 122.5 170 46.5
Dinv13355 Davidia involucrata HOM05D007501 ORTHO05D009528 7.8e-26 121.3 164 47.0
ECA236G0060 Erigeron canadensis HOM05D007501 ORTHO05D009528 3.0e-25 119.4 163 47.9
MD11G1270900 Malus domestica HOM05D007501 ORTHO05D009528 3.0e-25 119.4 165 45.5
Peaxi162Scf01338g00001 Petunia axillaris HOM05D007501 ORTHO05D009528 1.5e-24 117.1 172 43.6
Prupe.4G155600 Prunus persica HOM05D007501 ORTHO05D009528 1.9e-24 116.7 159 43.4
PGR083G0065 Punica granatum HOM05D007501 ORTHO05D009528 7.3e-24 114.8 160 41.2
QL08p025249 Quercus lobata HOM05D007501 ORTHO05D009528 2.8e-23 112.8 164 43.9
HanXRQChr11g0331231 Helianthus annuus HOM05D007501 ORTHO05D009528 4.7e-23 112.1 185 42.7
Haze_08443 Corylus avellana HOM05D007501 ORTHO05D009528 1.4e-22 110.5 157 43.3
Eucgr.F01372 Eucalyptus grandis HOM05D007501 ORTHO05D009528 1.4e-22 110.5 159 44.7
RcHm_v2.0_Chr5g0029351 Rosa chinensis HOM05D007501 ORTHO05D009528 5.2e-22 108.6 165 41.2
Nn3g20958 Nelumbo nucifera HOM05D007501 ORTHO05D009528 1.5e-21 107.1 171 42.7
Gohir.A11G289800 Gossypium hirsutum HOM05D007501 ORTHO05D009528 5.8e-21 105.1 164 43.9
Manes.15G099000 Manihot esculenta HOM05D007501 ORTHO05D009528 5.8e-21 105.1 166 41.0
Sopen07g030380 Solanum pennellii HOM05D007501 ORTHO05D009528 5.8e-21 105.1 164 40.2
Ciclev10024060m.g Citrus clementina HOM05D007501 ORTHO05D009528 1.3e-20 104.0 156 41.7
Gorai.007G332200 Gossypium raimondii HOM05D007501 ORTHO05D009528 1.3e-20 104.0 163 41.1
Cfa019508 Carpinus fangiana HOM05D007501 ORTHO05D009528 2.9e-20 102.8 166 40.4
PSO541G4098 Papaver somniferum HOM05D007501 ORTHO05D009528 2.9e-20 102.8 183 37.2
FAN21G3657 Fragaria x ananassa HOM05D007501 ORTHO05D009528 3.8e-20 102.4 167 40.7
PSO675G1715 Papaver somniferum HOM05D007501 ORTHO05D009528 4.9e-20 102.1 183 37.2
COL.COLO4_03607 Corchorus olitorius HOM05D007501 ORTHO05D009528 6.4e-20 101.7 158 43.7
FvH4_3g17620 Fragaria vesca HOM05D007501 ORTHO05D009528 6.4e-20 101.7 167 41.3
FAN11G3003 Fragaria x ananassa HOM05D007501 ORTHO05D009528 6.4e-20 101.7 167 41.3
Gohir.D11G302600 Gossypium hirsutum HOM05D007501 ORTHO05D009528 6.4e-20 101.7 163 42.3
FAN25G1377 Fragaria x ananassa HOM05D007501 ORTHO05D009528 8.4e-20 101.3 167 40.1
TWI39G1127 Tripterygium wilfordii HOM05D007501 ORTHO05D009528 1.1e-19 100.9 176 38.1
Peaxi162Scf00111g00124 Petunia axillaris HOM05D007501 ORTHO05D009528 2.4e-19 99.8 163 40.5
Potri.011G103500 Populus trichocarpa HOM05D007501 ORTHO05D009528 3.2e-19 99.4 160 40.6
Sabra11G0077300 Salix brachista HOM05D007501 ORTHO05D009528 3.2e-19 99.4 155 41.9
Sabra11G0082200 Salix brachista HOM05D007501 ORTHO05D009528 3.2e-19 99.4 155 41.9
Nitab4.5_0008460g0030 Nicotiana tabacum HOM05D007501 ORTHO05D009528 4.2e-19 99.0 153 39.2
PGSC0003DMG400043590 Solanum tuberosum HOM05D007501 ORTHO05D009528 5.4e-19 98.6 160 38.8
arahy.Tifrunner.gnm1.ann1.652QPS Arachis hypogaea HOM05D007501 ORTHO05D009528 9.3e-19 97.8 167 36.5
Nitab4.5_0001140g0140 Nicotiana tabacum HOM05D007501 ORTHO05D009528 9.3e-19 97.8 152 41.4
Manes.03G078700 Manihot esculenta HOM05D007501 ORTHO05D009528 2.7e-18 96.3 169 37.9
DCAR_019618 Daucus carota HOM05D007501 ORTHO05D009528 4.6e-18 95.5 180 40.0
CiPaw.12G110200 Carya illinoinensis HOM05D007501 ORTHO05D009528 6.0e-18 95.1 161 41.6
arahy.Tifrunner.gnm1.ann1.5U50EQ Arachis hypogaea HOM05D007501 ORTHO05D009528 1.0e-17 94.4 174 37.9
Aqoxy4G00171 Aquilegia oxysepala HOM05D007501 ORTHO05D009528 1.7e-17 93.6 176 38.1
Duzib213G0875 Durio zibethinus HOM05D007501 ORTHO05D009528 1.7e-17 93.6 156 41.0
Glyma.15G210500 Glycine max HOM05D007501 ORTHO05D009528 1.7e-17 93.6 214 37.9
Glyma.15G211700 Glycine max HOM05D007501 ORTHO05D009528 2.3e-17 93.2 207 36.7
Potri.001G382800 Populus trichocarpa HOM05D007501 ORTHO05D009528 3.0e-17 92.8 177 40.1
Nitab4.5_0000383g0020 Nicotiana tabacum HOM05D007501 ORTHO05D009528 5.1e-17 92.0 147 40.1
CAN.G375.54 Capsicum annuum HOM05D007501 ORTHO05D009528 1.5e-16 90.5 156 39.7
Lj3g0021891 Lotus japonicus HOM05D007501 ORTHO05D009528 1.5e-16 90.5 182 35.2
unitig_62.g23076 Utricularia gibba HOM05D006003 ORTHO05D007388 1.5e-16 90.5 154 39.6
Phvul.011G168000 Phaseolus vulgaris HOM05D007501 ORTHO05D009528 1.6e-15 87.0 206 35.0
Sp3g12990 Schrenkiella parvula HOM05D007501 ORTHO05D009528 1.6e-15 87.0 160 38.8
Dinv26703 Davidia involucrata HOM05D007501 ORTHO05D009528 2.1e-15 86.7 138 43.5
VMungo1127G2061 Vigna mungo HOM05D007501 ORTHO05D009528 4.8e-15 85.5 214 35.5
Cpa.g.sc682.2 Carica papaya HOM05D007501 ORTHO05D009528 6.2e-15 85.1 157 37.6
CsaV3_4G032800 Cucumis sativus L. HOM05D007501 ORTHO05D009528 2.4e-14 83.2 160 38.1
AL3G27070 Arabidopsis lyrata HOM05D007501 ORTHO05D009528 3.1e-14 82.8 176 35.8
Carub.0003s1443 Capsella rubella HOM05D007501 ORTHO05D009528 9.0e-14 81.3 177 36.2
CARHR089710 Cardamine hirsuta HOM05D007501 ORTHO05D009528 1.2e-13 80.9 156 37.8
ClCG11G017140 Citrullus lanatus HOM05D007501 ORTHO05D009528 2.0e-13 80.1 160 33.8
AT3G14760 Arabidopsis thaliana HOM05D007501 ORTHO05D009528 5.8e-13 78.6 173 37.0
Thhalv10021658m.g Eutrema salsugineum HOM05D007501 ORTHO05D009528 9.9e-13 77.8 176 35.2
TPR.G16483 Trifolium pratense HOM05D007501 ORTHO05D009528 1.3e-12 77.4 219 32.0
MELO3C027342.2 Cucumis melo HOM05D007501 ORTHO05D009528 2.2e-12 76.6 155 34.2
AUR62013946 Chenopodium quinoa HOM05D007501 ORTHO05D009528 3.8e-12 75.9 158 33.5
THA.LOC104822580 Tarenaya hassleriana HOM05D007501 ORTHO05D009528 8.4e-12 74.7 164 36.0
Psat4g135600 Pisum sativum HOM05D007501 ORTHO05D009528 1.4e-11 73.9 210 29.5
Thecc.07G134800 Theobroma cacao HOM05D007501 ORTHO05D009528 1.4e-11 73.9 160 35.0
C01p49690 Brassica napus HOM05D007501 ORTHO05D009528 1.9e-11 73.6 189 33.3
BolC1t04925H Brassica oleracea HOM05D007501 ORTHO05D009528 3.2e-11 72.8 191 33.0
Aa31LG8G1980 Aethionema arabicum HOM05D007501 ORTHO05D009528 4.2e-11 72.4 157 33.8
A01p39060 Brassica napus HOM05D007501 ORTHO05D009528 4.2e-11 72.4 168 32.7
CANSAT56G4361 Cannabis sativa HOM05D007501 ORTHO05D009528 4.2e-11 72.4 185 34.6
BraA01t03953Z Brassica rapa HOM05D007501 ORTHO05D009528 7.1e-11 71.6 191 31.9
Sed0021060 Sechium edule HOM05D007501 ORTHO05D009528 1.3e-09 67.4 159 32.1
AUR62019665 Chenopodium quinoa HOM05D007501 ORTHO05D009528 1.8e-09 67.0 158 32.3
ATR0681G022 Amborella trichopoda HOM05D007501 ORTHO05D009528 3.9e-09 65.9 73 50.7
Medtr8g042500 Medicago truncatula HOM05D007501 ORTHO05D009528 3.9e-09 65.9 89 47.2
BcaC09g48445 Brassica carinata HOM05D007501 ORTHO05D009528 1.5e-08 63.9 187 31.6
Peaxi162Scf00069g01713 Petunia axillaris HOM05D007501 ORTHO05D009528 3.3e-08 62.8 84 42.9
EL10Ac4g08429 Beta vulgaris HOM05D007501 ORTHO05D009528 6.2e-07 58.5 34 73.5
Lalb_Chr03g0031351 Lupinus albus HOM05D007501 ORTHO05D009528 8.1e-07 58.2 160 33.1
ClCG08G007250 Citrullus lanatus HOM05D007964 ORTHO05D010090 1.4e-06 57.4 55 45.5
Sed0009872 Sechium edule HOM05D007964 ORTHO05D010090 1.8e-06 57.0 47 51.1
Zm00001eb055040 Zea mays HOM05D007501 ORTHO05D009528 3.1e-06 56.2 35 68.6
Zm00001eb314570 Zea mays HOM05D007501 ORTHO05D009528 3.1e-06 56.2 46 56.5
Os02g0321600 Oryza sativa ssp. japonica HOM05D007501 ORTHO05D009528 6.9e-06 55.1 46 52.2
Sed0027049 Sechium edule HOM05D007964 ORTHO05D010090 6.9e-06 55.1 38 57.9


User provided reference genes

Program Settings