Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00675 Erythranthe guttata HOM05D003510 ORTHO05D004144 5.4e-113 411.0 204 100.0
SGA_v2.0_scaffold73G24371 Striga asiatica HOM05D003510 ORTHO05D004144 1.0e-42 177.6 187 53.5
Migut.E00355 Erythranthe guttata HOM05D003510 ORTHO05D004144 1.1e-38 164.1 180 48.9
Migut.M00674 Erythranthe guttata HOM05D003510 ORTHO05D004144 6.9e-36 154.8 108 70.4
SGA_v2.0_scaffold14G06881 Striga asiatica HOM05D003510 ORTHO05D004144 2.0e-35 153.3 204 43.1
Hma1.2p1_0061F.1_g033710 Hydrangea macrophylla HOM05D003510 ORTHO05D004144 3.4e-35 152.5 189 45.0
CSS0018626 Camellia sinensis var. sinensis HOM05D003510 ORTHO05D004144 5.9e-35 151.8 152 50.0
Ciclev10016740m.g Citrus clementina HOM05D003510 ORTHO05D004144 5.9e-35 151.8 161 47.8
Duzib248G1132 Durio zibethinus HOM05D003510 ORTHO05D004144 7.7e-35 151.4 159 47.8
Carub.0002s1476 Capsella rubella HOM05D003510 ORTHO05D004144 1.7e-34 150.2 166 45.2
Manes.14G104000 Manihot esculenta HOM05D003510 ORTHO05D004144 1.7e-34 150.2 150 50.7
Psat2g082000 Pisum sativum HOM05D003510 ORTHO05D004144 1.7e-34 150.2 147 50.3
THA.LOC104808154 Tarenaya hassleriana HOM05D003510 ORTHO05D004144 1.7e-34 150.2 185 45.4
Migut.H02048 Erythranthe guttata HOM05D003510 ORTHO05D004144 2.9e-34 149.4 146 51.4
GSVIVG01011878001 Vitis vinifera HOM05D003510 ORTHO05D004144 2.9e-34 149.4 176 46.0
Ah.02g127620 Amaranthus hybridus HOM05D003510 ORTHO05D004144 3.8e-34 149.1 193 44.6
Aqoxy3G03956 Aquilegia oxysepala HOM05D003510 ORTHO05D004144 3.8e-34 149.1 158 50.0
Cc11_g09950 Coffea canephora HOM05D003510 ORTHO05D004144 3.8e-34 149.1 151 48.3
AT1G68260 Arabidopsis thaliana HOM05D003510 ORTHO05D004144 5.0e-34 148.7 168 44.0
Thhalv10019154m.g Eutrema salsugineum HOM05D003510 ORTHO05D004144 5.0e-34 148.7 170 43.5
Peaxi162Scf00564g00029 Petunia axillaris HOM05D003510 ORTHO05D004144 5.0e-34 148.7 163 47.9
Rhsim09G0106600 Rhododendron simsii HOM05D003510 ORTHO05D004144 5.0e-34 148.7 152 50.0
Thecc.02G226300 Theobroma cacao HOM05D003510 ORTHO05D004144 6.5e-34 148.3 159 47.8
AL2G27110 Arabidopsis lyrata HOM05D003510 ORTHO05D004144 8.5e-34 147.9 183 43.2
DCAR_023651 Daucus carota HOM05D003510 ORTHO05D004144 8.5e-34 147.9 221 40.7
QL01p040948 Quercus lobata HOM05D003510 ORTHO05D004144 8.5e-34 147.9 152 48.0
Sp5g23330 Schrenkiella parvula HOM05D003510 ORTHO05D004144 8.5e-34 147.9 169 45.6
CARHR060960 Cardamine hirsuta HOM05D003510 ORTHO05D004144 1.4e-33 147.1 168 45.2
RcHm_v2.0_Chr4g0434941 Rosa chinensis HOM05D003510 ORTHO05D004144 1.4e-33 147.1 150 48.7
BraA07t31088Z Brassica rapa HOM05D003510 ORTHO05D004144 1.9e-33 146.7 170 44.1
PGR102G3338 Punica granatum HOM05D003510 ORTHO05D004144 2.5e-33 146.4 149 48.3
Prupe.1G313100 Prunus persica HOM05D003510 ORTHO05D004144 3.2e-33 146.0 173 45.1
Glyma.01G080400 Glycine max HOM05D003510 ORTHO05D004144 4.2e-33 145.6 159 44.0
Solyc04g007260.4 Solanum lycopersicum HOM05D003510 ORTHO05D004144 4.2e-33 145.6 163 46.6
Sopen04g002320 Solanum pennellii HOM05D003510 ORTHO05D004144 4.2e-33 145.6 163 46.6
TWI75G1742 Tripterygium wilfordii HOM05D003510 ORTHO05D004144 4.2e-33 145.6 186 43.5
Atru.chr11.132 Acer truncatum HOM05D003510 ORTHO05D004144 5.5e-33 145.2 175 44.0
CiPaw.05G239200 Carya illinoinensis HOM05D003510 ORTHO05D004144 7.2e-33 144.8 152 46.7
Gohir.D04G137800 Gossypium hirsutum HOM05D003510 ORTHO05D004144 7.2e-33 144.8 159 47.2
Gorai.012G122200 Gossypium raimondii HOM05D003510 ORTHO05D004144 7.2e-33 144.8 159 47.2
CANSAT01G1441 Cannabis sativa HOM05D003510 ORTHO05D004144 1.2e-32 144.1 158 45.6
BcaC08g46259 Brassica carinata HOM05D003510 ORTHO05D004144 1.6e-32 143.7 170 43.5
C06p41720 Brassica napus HOM05D003510 ORTHO05D004144 1.6e-32 143.7 170 43.5
GSVIVG01011876001 Vitis vinifera HOM05D003510 ORTHO05D004144 1.6e-32 143.7 176 44.9
FAN17G2584 Fragaria x ananassa HOM05D003510 ORTHO05D004144 2.1e-32 143.3 151 46.4
Lj3A1013T42 Lonicera japonica HOM05D003510 ORTHO05D004144 2.1e-32 143.3 146 47.3
arahy.Tifrunner.gnm1.ann1.VLLQ8N Arachis hypogaea HOM05D003510 ORTHO05D004144 2.7e-32 142.9 146 45.9
FAN12G2466 Fragaria x ananassa HOM05D003510 ORTHO05D004144 2.7e-32 142.9 151 45.7
Sc11g0003500 Simmondsia chinensis HOM05D003510 ORTHO05D004144 2.7e-32 142.9 160 46.2
MELO3C012260.2 Cucumis melo HOM05D003510 ORTHO05D004144 3.6e-32 142.5 186 39.8
HanXRQChr16g0529461 Helianthus annuus HOM05D003510 ORTHO05D004144 3.6e-32 142.5 146 48.6
PGSC0003DMG400005981 Solanum tuberosum HOM05D003510 ORTHO05D004144 3.6e-32 142.5 163 45.4
COL.COLO4_04883 Corchorus olitorius HOM05D003510 ORTHO05D004144 4.6e-32 142.1 172 43.6
PSO063G2460 Papaver somniferum HOM05D003510 ORTHO05D004144 4.6e-32 142.1 189 40.2
Medtr5g056390 Medicago truncatula HOM05D003510 ORTHO05D004144 6.1e-32 141.7 177 42.4
MD16G1041000 Malus domestica HOM05D003510 ORTHO05D004144 7.9e-32 141.4 208 40.9
Nitab4.5_0000057g0210 Nicotiana tabacum HOM05D003510 ORTHO05D004144 7.9e-32 141.4 183 44.3
TAR371G0378 Trochodendron aralioides HOM05D003510 ORTHO05D004144 7.9e-32 141.4 146 47.3
vmacro10568 Vaccinium macrocarpon HOM05D003510 ORTHO05D004144 1.0e-31 141.0 143 49.0
VMungo1215G1668 Vigna mungo HOM05D003510 ORTHO05D004144 1.0e-31 141.0 146 47.3
ATR1125G078 Amborella trichopoda HOM05D003510 ORTHO05D004144 1.8e-31 140.2 162 44.4
EL10Ac6g14376 Beta vulgaris HOM05D003510 ORTHO05D004144 1.8e-31 140.2 152 46.7
Eucgr.B03007 Eucalyptus grandis HOM05D003510 ORTHO05D004144 1.8e-31 140.2 149 46.3
FAN12G0948 Fragaria x ananassa HOM05D003510 ORTHO05D004144 1.8e-31 140.2 151 45.0
Lj2g0023320 Lotus japonicus HOM05D003510 ORTHO05D004144 2.3e-31 139.8 178 42.1
unitig_27.g25253 Utricularia gibba HOM05D003510 ORTHO05D004144 3.0e-31 139.4 148 47.3
CsaV3_5G034440 Cucumis sativus L. HOM05D003510 ORTHO05D004144 3.9e-31 139.0 184 39.1
FAN22G0292 Fragaria x ananassa HOM05D003510 ORTHO05D004144 3.9e-31 139.0 140 46.4
Phvul.003G030100 Phaseolus vulgaris HOM05D003510 ORTHO05D004144 3.9e-31 139.0 146 45.2
Cpa.g.sc65.42 Carica papaya HOM05D003510 ORTHO05D004144 5.1e-31 138.7 135 48.1
FvH4_4g27130 Fragaria vesca HOM05D003510 ORTHO05D004144 5.1e-31 138.7 138 49.3
Lsat_1_v5_gn_4_15820 Lactuca sativa HOM05D003510 ORTHO05D004144 5.1e-31 138.7 146 44.5
CAN.G1052.1 Capsicum annuum HOM05D003510 ORTHO05D004144 8.8e-31 137.9 190 42.6
Nitab4.5_0007398g0020 Nicotiana tabacum HOM05D003510 ORTHO05D004144 8.8e-31 137.9 177 45.2
FAN12G3824 Fragaria x ananassa HOM05D003510 ORTHO05D004144 1.5e-30 137.1 173 40.5
ECA234G2589 Erigeron canadensis HOM05D003510 ORTHO05D004144 2.6e-30 136.3 139 49.6
Lalb_Chr04g0254661 Lupinus albus HOM05D003510 ORTHO05D004144 2.6e-30 136.3 178 40.4
RcHm_v2.0_Chr4g0434951 Rosa chinensis HOM05D003510 ORTHO05D004144 2.6e-30 136.3 145 46.2
AT1G35290 Arabidopsis thaliana HOM05D003510 ORTHO05D004144 5.7e-30 135.2 174 42.0
vmacro10567 Vaccinium macrocarpon HOM05D003510 ORTHO05D004144 5.7e-30 135.2 165 44.2
FvH4_4g27160 Fragaria vesca HOM05D003510 ORTHO05D004144 7.4e-30 134.8 173 40.5
Sp1g30110 Schrenkiella parvula HOM05D003510 ORTHO05D004144 7.4e-30 134.8 157 43.9
Solyc04g007200.4 Solanum lycopersicum HOM05D003510 ORTHO05D004144 7.4e-30 134.8 180 43.9
Sopen04g002260 Solanum pennellii HOM05D003510 ORTHO05D004144 7.4e-30 134.8 180 43.3
PGSC0003DMG400007750 Solanum tuberosum HOM05D003510 ORTHO05D004144 7.4e-30 134.8 139 48.2
Haze_00607 Corylus avellana HOM05D003510 ORTHO05D004144 9.7e-30 134.4 147 46.3
arahy.Tifrunner.gnm1.ann1.LKJ3D4 Arachis hypogaea HOM05D003510 ORTHO05D004144 1.7e-29 133.7 140 45.7
CARHR286260 Cardamine hirsuta HOM05D003510 ORTHO05D004144 1.7e-29 133.7 165 41.2
THA.LOC104821911 Tarenaya hassleriana HOM05D003510 ORTHO05D004144 1.7e-29 133.7 167 42.5
TPR.G27953 Trifolium pratense HOM05D003510 ORTHO05D004144 1.7e-29 133.7 149 45.6
Aa31sc376G40 Aethionema arabicum HOM05D003510 ORTHO05D004144 2.2e-29 133.3 150 46.0
AT1G68280 Arabidopsis thaliana HOM05D003510 ORTHO05D004144 2.2e-29 133.3 187 40.1
PGSC0003DMG402015879 Solanum tuberosum HOM05D003510 ORTHO05D004144 2.2e-29 133.3 180 40.0
CARHR220110 Cardamine hirsuta HOM05D003510 ORTHO05D004144 2.8e-29 132.9 166 40.4
Lsat_1_v5_gn_5_163161 Lactuca sativa HOM05D003510 ORTHO05D004144 2.8e-29 132.9 176 40.3
Potri.010G123102 Populus trichocarpa HOM05D003510 ORTHO05D004144 2.8e-29 132.9 200 40.0
FAN12G1645 Fragaria x ananassa HOM05D003510 ORTHO05D004144 6.3e-29 131.7 140 45.0
Ca_10364_v3 Cicer arietinum L. HOM05D003510 ORTHO05D004144 8.2e-29 131.3 152 44.7
AagrBONN_evm.TU.Sc2ySwM_344.2496 Anthoceros agrestis HOM05D003510 ORTHO05D004144 1.4e-28 130.6 157 40.8
Lj7P525T18 Lonicera japonica HOM05D003510 ORTHO05D004144 1.4e-28 130.6 134 47.8
RcHm_v2.0_Chr6g0286301 Rosa chinensis HOM05D003510 ORTHO05D004144 1.4e-28 130.6 138 47.1
THA.LOC104815461 Tarenaya hassleriana HOM05D003510 ORTHO05D004144 1.8e-28 130.2 148 45.3
Medtr5g056230 Medicago truncatula HOM05D003510 ORTHO05D004144 2.4e-28 129.8 190 38.9
BcaB03g15105 Brassica carinata HOM05D003510 ORTHO05D004144 3.1e-28 129.4 138 44.9
RcHm_v2.0_Chr6g0286321 Rosa chinensis HOM05D003510 ORTHO05D004144 5.3e-28 128.6 138 46.4
Carub.0001s3294 Capsella rubella HOM05D003510 ORTHO05D004144 1.2e-27 127.5 170 40.0
Sed0022764 Sechium edule HOM05D003510 ORTHO05D004144 2.0e-27 126.7 165 41.2
Hund25056 Selenicereus undatus HOM05D003510 ORTHO05D004144 2.6e-27 126.3 190 38.9
AL1G49960 Arabidopsis lyrata HOM05D003510 ORTHO05D004144 3.4e-27 125.9 189 39.7
HPP92_015110 Vanilla planifolia HOM05D003510 ORTHO05D004144 3.4e-27 125.9 143 45.5
HPP92_015116 Vanilla planifolia HOM05D003510 ORTHO05D004144 3.4e-27 125.9 143 45.5
Zm00001eb074540 Zea mays HOM05D003510 ORTHO05D004144 3.4e-27 125.9 136 44.1
SMO119G0319 Selaginella moellendorffii HOM05D003510 ORTHO05D004144 4.5e-27 125.6 135 44.4
Ah.01g017060 Amaranthus hybridus HOM05D003510 ORTHO05D004144 7.7e-27 124.8 197 40.6
Lalb_Chr04g0254671 Lupinus albus HOM05D003510 ORTHO05D004144 7.7e-27 124.8 177 39.0
PGSC0003DMG401015879 Solanum tuberosum HOM05D003510 ORTHO05D004144 7.7e-27 124.8 194 38.1
Carub.0001s3288 Capsella rubella HOM05D003510 ORTHO05D004144 1.0e-26 124.4 184 38.0
Cpa.g.sc65.43 Carica papaya HOM05D003510 ORTHO05D004144 1.3e-26 124.0 129 45.7
RcHm_v2.0_Chr6g0286291 Rosa chinensis HOM05D003510 ORTHO05D004144 2.2e-26 123.2 138 45.7
Sabra10G0093200 Salix brachista HOM05D003510 ORTHO05D004144 2.9e-26 122.9 226 35.8
Carub.0001s3293 Capsella rubella HOM05D003510 ORTHO05D004144 5.0e-26 122.1 167 40.7
HanXRQChr10g0288901 Helianthus annuus HOM05D003510 ORTHO05D004144 5.0e-26 122.1 139 45.3
ClCG05G022600 Citrullus lanatus HOM05D003510 ORTHO05D004144 6.5e-26 121.7 127 44.1
HanXRQChr03g0078631 Helianthus annuus HOM05D003510 ORTHO05D004144 8.5e-26 121.3 139 44.6
RcHm_v2.0_Chr6g0286141 Rosa chinensis HOM05D003510 ORTHO05D004144 1.1e-25 120.9 138 44.2
HanXRQChr10g0296841 Helianthus annuus HOM05D003510 ORTHO05D004144 2.5e-25 119.8 139 44.6
MELO3C012259.2 Cucumis melo HOM05D003510 ORTHO05D004144 4.2e-25 119.0 146 40.4
BcaB02g07984 Brassica carinata HOM05D003510 ORTHO05D004144 5.5e-25 118.6 161 41.6
AUR62034133 Chenopodium quinoa HOM05D003510 ORTHO05D004144 9.4e-25 117.9 140 41.4
AUR62034134 Chenopodium quinoa HOM05D003510 ORTHO05D004144 9.4e-25 117.9 140 41.4
AUR62044553 Chenopodium quinoa HOM05D003510 ORTHO05D004144 9.4e-25 117.9 140 41.4
AUR62044554 Chenopodium quinoa HOM05D003510 ORTHO05D004144 9.4e-25 117.9 140 41.4
Gohir.A04G098000 Gossypium hirsutum HOM05D003510 ORTHO05D004144 1.6e-24 117.1 159 39.6
RcHm_v2.0_Chr6g0286191 Rosa chinensis HOM05D003510 ORTHO05D004144 1.6e-24 117.1 135 43.0
RcHm_v2.0_Chr6g0286261 Rosa chinensis HOM05D003510 ORTHO05D004144 1.6e-24 117.1 135 43.0
Solyc04g007190.4 Solanum lycopersicum HOM05D003510 ORTHO05D004144 1.6e-24 117.1 180 36.1
AUR62037321 Chenopodium quinoa HOM05D003510 ORTHO05D004144 2.7e-24 116.3 152 40.1
AL1G49980 Arabidopsis lyrata HOM05D003510 ORTHO05D004144 4.7e-24 115.5 144 41.0
Oeu059502.1 Olea europaea HOM05D003510 ORTHO05D004144 1.4e-23 114.0 128 43.0
CANSAT35G1707 Cannabis sativa HOM05D003510 ORTHO05D004144 1.8e-23 113.6 133 42.1
CANSAT35G1684 Cannabis sativa HOM05D003510 ORTHO05D004144 5.2e-23 112.1 127 45.7
HanXRQChr10g0300041 Helianthus annuus HOM05D003510 ORTHO05D004144 5.2e-23 112.1 133 44.4
DCAR_007249 Daucus carota HOM05D003510 ORTHO05D004144 6.7e-23 111.7 150 40.7
Ah.01g005250 Amaranthus hybridus HOM05D000873 ORTHO05D001654 8.8e-23 111.3 139 42.4
AagrBONN_evm.TU.Sc2ySwM_344.2495 Anthoceros agrestis HOM05D003510 ORTHO05D004144 8.8e-23 111.3 202 32.7
SMO141G0281 Selaginella moellendorffii HOM05D003977 ORTHO05D004536 1.5e-22 110.5 140 38.6
CANSAT35G0765 Cannabis sativa HOM05D003510 ORTHO05D004144 2.6e-22 109.8 141 42.6
SGA_v2.0_scaffold211G42096 Striga asiatica HOM05D003510 ORTHO05D004144 2.8e-21 106.3 131 47.3
Aqoxy1G03141 Aquilegia oxysepala HOM05D003510 ORTHO05D004144 6.3e-21 105.1 135 37.8
DCAR_026739 Daucus carota HOM05D003510 ORTHO05D004144 6.3e-21 105.1 121 46.3
BolC6t39254H Brassica oleracea HOM05D001294 ORTHO05D001178 2.2e-18 96.7 171 34.5
Actinidia16662 Actinidia chinensis HOM05D003510 ORTHO05D004144 2.9e-18 96.3 104 44.2
Nn4g23884 Nelumbo nucifera HOM05D003510 ORTHO05D004144 8.5e-18 94.7 93 52.7
Zm00001eb074550 Zea mays HOM05D003510 ORTHO05D004144 1.5e-17 94.0 140 35.0
ECA234G3856 Erigeron canadensis HOM05D003510 ORTHO05D000001 3.6e-16 89.4 104 43.3
Gorai.012G122300 Gossypium raimondii HOM05D003510 ORTHO05D004144 8.0e-16 88.2 100 46.0
AUR62023875 Chenopodium quinoa HOM05D003510 ORTHO05D004144 1.0e-15 87.8 103 38.8
A09p18480 Brassica napus HOM05D003510 ORTHO05D004144 2.3e-15 86.7 138 35.5
Gohir.A04G098050 Gossypium hirsutum HOM05D003510 ORTHO05D004144 2.3e-15 86.7 93 47.3
Os02g0660800 Oryza sativa ssp. japonica HOM05D003510 ORTHO05D004144 4.0e-15 85.9 131 31.3
SalBow8G4707 Salvia bowleyana HOM05D003510 ORTHO05D004144 4.0e-15 85.9 92 45.7
Gohir.A04G098100 Gossypium hirsutum HOM05D003510 ORTHO05D004144 1.5e-14 84.0 84 51.2
Actinidia02892 Actinidia chinensis HOM05D003510 ORTHO05D004144 2.6e-14 83.2 87 43.7
Os02g0659700 Oryza sativa ssp. japonica HOM05D003510 ORTHO05D004144 5.7e-14 82.0 135 34.1
Gohir.D04G137825 Gossypium hirsutum HOM05D003510 ORTHO05D004144 1.4e-12 77.4 128 32.8
Gohir.D04G137850 Gossypium hirsutum HOM05D003510 ORTHO05D004144 1.4e-12 77.4 100 41.0
AT1G35250 Arabidopsis thaliana HOM05D003510 ORTHO05D004144 9.1e-12 74.7 98 41.8
Zm00001eb249670 Zea mays HOM05D003510 ORTHO05D004144 1.2e-11 74.3 159 28.3
AUR62022283 Chenopodium quinoa HOM05D003510 ORTHO05D004144 2.7e-11 73.2 134 32.8
AUR62044675 Chenopodium quinoa HOM05D003510 ORTHO05D004144 1.3e-10 70.9 72 51.4
SMO012G0036 Selaginella moellendorffii HOM05D003510 ORTHO05D004144 8.5e-10 68.2 85 38.8
AL1G50030 Arabidopsis lyrata HOM05D003510 ORTHO05D004144 1.5e-09 67.4 106 35.8
MSTRG.13540 Avicennia marina HOM05D003510 ORTHO05D004144 1.5e-09 67.4 105 39.0
AUR62002850 Chenopodium quinoa HOM05D003510 ORTHO05D004144 3.2e-09 66.2 123 32.5
AUR62022280 Chenopodium quinoa HOM05D003510 ORTHO05D004144 7.2e-09 65.1 69 47.8
Dinv21067 Davidia involucrata HOM05D003510 ORTHO05D004144 7.2e-09 65.1 57 47.4
SEGI_33057 Sequoiadendron giganteum HOM05D003510 ORTHO05D004144 1.6e-08 63.9 68 47.1
Psat0s3549g0120 Pisum sativum HOM05D003510 ORTHO05D004144 2.7e-08 63.2 127 29.9
SEGI_30670 Sequoiadendron giganteum HOM05D003510 ORTHO05D004144 3.6e-08 62.8 65 41.5
Cre04.g213761 Chlamydomonas reinhardtii HOM05D003510 ORTHO05D004144 4.0e-07 59.3 126 26.2
Os04g0553300 Oryza sativa ssp. japonica HOM05D003510 ORTHO05D004144 4.0e-07 59.3 121 31.4
Mapoly0104s0006 Marchantia polymorpha HOM05D003510 ORTHO05D004144 8.8e-07 58.2 65 36.9
Haze_00608 Corylus avellana HOM05D003510 ORTHO05D004144 2.0e-06 57.0 55 43.6


User provided reference genes

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