Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00658 Erythranthe guttata HOM05D003649 ORTHO05D004498 7.9e-250 866.7 454 100.0
SGA_v2.0_scaffold73G24356 Striga asiatica HOM05D003649 ORTHO05D004498 2.0e-184 649.4 433 78.1
MSTRG.6707 Avicennia marina HOM05D003649 ORTHO05D004498 3.5e-181 638.6 443 76.3
SalBow5G3252 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.0e-180 637.1 433 76.9
SalBow6G0551 Salvia bowleyana HOM05D003649 ORTHO05D004498 4.8e-178 628.2 432 77.3
SalBow8G0566 Salvia bowleyana HOM05D003649 ORTHO05D004498 1.4e-177 626.7 432 77.1
Oeu058434.1 Olea europaea HOM05D003649 ORTHO05D004498 1.0e-164 583.9 442 71.9
Migut.M00659 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.0e-159 567.4 434 72.4
Actinidia14919 Actinidia chinensis HOM05D003649 ORTHO05D004498 4.3e-147 525.4 427 65.1
CSS0018218 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 2.6e-144 516.2 427 64.6
CSS0028028 Camellia sinensis var. sinensis HOM05D003649 ORTHO05D004498 3.4e-144 515.8 438 63.5
vmacro10596 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.0e-143 514.2 459 62.1
unitig_748.g7599 Utricularia gibba HOM05D003649 ORTHO05D004498 3.8e-143 512.3 431 64.7
HanXRQChr13g0424451 Helianthus annuus HOM05D003649 ORTHO05D004498 8.5e-143 511.1 440 62.7
PGR142G4312 Punica granatum HOM05D003649 ORTHO05D004498 1.1e-142 510.8 428 63.6
Duzib168G1903 Durio zibethinus HOM05D003649 ORTHO05D004498 4.2e-142 508.8 425 63.1
GSVIVG01038352001 Vitis vinifera HOM05D003649 ORTHO05D004498 5.5e-142 508.4 430 62.8
Migut.J00669 Erythranthe guttata HOM05D003649 ORTHO05D004498 1.6e-141 506.9 429 65.7
GSVIVG01011050001 Vitis vinifera HOM05D003649 ORTHO05D004498 2.1e-141 506.5 425 63.1
Gorai.001G124600 Gossypium raimondii HOM05D003649 ORTHO05D004498 7.9e-141 504.6 424 62.7
Gohir.A07G112700 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.0e-140 504.2 424 62.5
Hma1.2p1_0505F.1_g168130 Hydrangea macrophylla HOM05D003649 ORTHO05D004498 1.0e-140 504.2 426 64.3
Gohir.D07G116200 Gossypium hirsutum HOM05D003649 ORTHO05D004498 1.8e-140 503.4 424 62.7
Rhsim09G0104200 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.8e-140 503.4 430 63.7
Potri.001G394000 Populus trichocarpa HOM05D003649 ORTHO05D004498 5.1e-140 501.9 425 62.8
Actinidia37054 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.5e-139 500.4 409 64.8
Cfa011266 Carpinus fangiana HOM05D003649 ORTHO05D004498 2.0e-139 500.0 428 62.9
DCAR_002270 Daucus carota HOM05D003649 ORTHO05D004498 2.0e-139 500.0 428 65.0
CiPaw.08G013900 Carya illinoinensis HOM05D003649 ORTHO05D004498 7.4e-139 498.0 427 61.4
TWI38G0227 Tripterygium wilfordii HOM05D003649 ORTHO05D004498 8.2e-138 494.6 426 62.7
Peaxi162Scf00111g00723 Petunia axillaris HOM05D003649 ORTHO05D004498 1.4e-137 493.8 429 63.6
QL02p065039 Quercus lobata HOM05D003649 ORTHO05D004498 6.9e-137 491.5 445 61.1
Sc26g0001160 Simmondsia chinensis HOM05D003649 ORTHO05D004498 6.9e-137 491.5 443 61.6
Atru.chr3.3291 Acer truncatum HOM05D003649 ORTHO05D004498 9.1e-137 491.1 433 60.7
Phvul.004G052800 Phaseolus vulgaris HOM05D003649 ORTHO05D004498 1.2e-136 490.7 428 61.0
Potri.011G112500 Populus trichocarpa HOM05D003649 ORTHO05D004498 7.7e-136 488.0 428 60.7
Ca_25060_v3 Cicer arietinum L. HOM05D003649 ORTHO05D004498 1.0e-135 487.6 432 61.1
EL10Ac3g06484 Beta vulgaris HOM05D003649 ORTHO05D004498 2.2e-135 486.5 432 62.5
Lsat_1_v5_gn_5_148460 Lactuca sativa HOM05D003649 ORTHO05D004498 2.2e-135 486.5 426 60.8
Lj2g0021753 Lotus japonicus HOM05D003649 ORTHO05D004498 5.0e-135 485.3 434 59.2
Manes.14G150400 Manihot esculenta HOM05D003649 ORTHO05D004498 9.4e-134 481.1 425 60.5
Aqoxy1G02521 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 2.1e-133 479.9 444 59.0
Lalb_Chr21g0316901 Lupinus albus HOM05D003649 ORTHO05D004498 6.1e-133 478.4 433 60.0
Manes.14G152600 Manihot esculenta HOM05D003649 ORTHO05D004498 8.0e-133 478.0 423 60.0
MELO3C024126.2 Cucumis melo HOM05D003649 ORTHO05D004498 1.4e-132 477.2 419 61.1
Ah.13g074570 Amaranthus hybridus HOM05D003649 ORTHO05D004498 1.8e-132 476.9 441 58.7
Cc05_g10190 Coffea canephora HOM05D003649 ORTHO05D004498 2.3e-132 476.5 431 62.2
Prupe.4G148600 Prunus persica HOM05D003649 ORTHO05D004498 2.3e-132 476.5 433 59.8
Sabra11G0099700 Salix brachista HOM05D003649 ORTHO05D004498 3.0e-132 476.1 439 59.2
CANSAT01G2347 Cannabis sativa HOM05D003649 ORTHO05D004498 1.1e-131 474.2 429 60.6
CsaV3_7G025330 Cucumis sativus L. HOM05D003649 ORTHO05D004498 1.5e-131 473.8 419 60.6
COL.COLO4_24336 Corchorus olitorius HOM05D003649 ORTHO05D004498 5.7e-131 471.9 434 58.1
MD10G1195400 Malus domestica HOM05D003649 ORTHO05D004498 9.7e-131 471.1 434 60.1
Glyma.05G087100 Glycine max HOM05D003649 ORTHO05D004498 2.8e-130 469.5 427 58.1
Thecc.09G274600 Theobroma cacao HOM05D003649 ORTHO05D004498 3.7e-130 469.2 427 59.3
Nn7g38381 Nelumbo nucifera HOM05D003649 ORTHO05D004498 8.2e-130 468.0 438 57.5
Nitab4.5_0001924g0070 Nicotiana tabacum HOM05D003649 ORTHO05D004498 1.1e-129 467.6 382 66.2
Hund24921 Selenicereus undatus HOM05D003649 ORTHO05D004498 9.1e-129 464.5 427 58.5
ClCG09G009520 Citrullus lanatus HOM05D003649 ORTHO05D004498 2.0e-128 463.4 431 58.0
ECA236G2713 Erigeron canadensis HOM05D003649 ORTHO05D004498 3.5e-128 462.6 392 63.0
Aa31LG2G14410 Aethionema arabicum HOM05D003649 ORTHO05D004498 4.5e-128 462.2 424 58.0
TPR.G34458 Trifolium pratense HOM05D003649 ORTHO05D004498 5.9e-128 461.8 459 56.0
CARHR286950 Cardamine hirsuta HOM05D003649 ORTHO05D004498 5.0e-127 458.8 425 57.6
Nitab4.5_0001864g0020 Nicotiana tabacum HOM05D003649 ORTHO05D004498 1.1e-126 457.6 337 70.3
AT1G31660 Arabidopsis thaliana HOM05D003649 ORTHO05D004498 3.2e-126 456.1 426 56.1
Carub.0001s2998 Capsella rubella HOM05D003649 ORTHO05D004498 1.2e-125 454.1 427 56.7
TAR627G1042 Trochodendron aralioides HOM05D003649 ORTHO05D004498 1.2e-125 454.1 378 63.0
Sp1g27340 Schrenkiella parvula HOM05D003649 ORTHO05D004498 3.6e-125 452.6 443 55.5
THA.LOC104814384 Tarenaya hassleriana HOM05D003649 ORTHO05D004498 8.0e-125 451.4 436 57.1
EL10Ac3g06580 Beta vulgaris HOM05D003649 ORTHO05D004498 1.0e-124 451.1 437 58.6
Eucgr.F01411 Eucalyptus grandis HOM05D003649 ORTHO05D004498 1.8e-124 450.3 427 59.0
Thhalv10007604m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 1.8e-124 450.3 425 56.2
RcHm_v2.0_Chr5g0027651 Rosa chinensis HOM05D003649 ORTHO05D004498 4.0e-124 449.1 455 55.2
Rhsim09G0104400 Rhododendron simsii HOM05D003649 ORTHO05D004498 5.2e-124 448.7 420 60.0
BcaB03g13795 Brassica carinata HOM05D003649 ORTHO05D004498 8.8e-124 448.0 448 55.1
PSO675G2950 Papaver somniferum HOM05D003649 ORTHO05D004498 1.5e-123 447.2 422 58.1
Sopen07g029910 Solanum pennellii HOM05D003649 ORTHO05D004498 1.5e-123 447.2 344 68.0
arahy.Tifrunner.gnm1.ann1.2990BW Arachis hypogaea HOM05D003649 ORTHO05D004498 2.0e-123 446.8 427 55.5
PGSC0003DMG400027653 Solanum tuberosum HOM05D003649 ORTHO05D004498 2.8e-122 443.0 432 57.9
AUR62036018 Chenopodium quinoa HOM05D003649 ORTHO05D004498 4.8e-122 442.2 438 56.6
Sed0023018 Sechium edule HOM05D003649 ORTHO05D004498 4.8e-122 442.2 424 56.8
MBI17_g43195_MAGBIO Magnolia biondii HOM05D003649 ORTHO05D004498 8.2e-122 441.4 408 59.3
Medtr5g025980 Medicago truncatula HOM05D003649 ORTHO05D004498 8.2e-122 441.4 425 56.5
FAN25G2823 Fragaria x ananassa HOM05D003649 ORTHO05D004498 1.1e-121 441.0 445 55.3
A07p09400 Brassica napus HOM05D003649 ORTHO05D004498 1.4e-121 440.7 444 55.0
FvH4_3g16580 Fragaria vesca HOM05D003649 ORTHO05D004498 3.1e-121 439.5 453 55.0
FAN16G3269 Fragaria x ananassa HOM05D003649 ORTHO05D004498 4.1e-121 439.1 448 54.9
PSO541G1065 Papaver somniferum HOM05D003649 ORTHO05D004498 4.1e-121 439.1 422 57.1
BraA07t28735Z Brassica rapa HOM05D003649 ORTHO05D004498 7.0e-121 438.3 444 54.7
Ciclev10023274m.g Citrus clementina HOM05D003649 ORTHO05D004498 9.1e-121 438.0 310 69.4
FAN21G3990 Fragaria x ananassa HOM05D003649 ORTHO05D004498 9.1e-121 438.0 448 54.9
C07p14470 Brassica napus HOM05D003649 ORTHO05D004498 1.6e-120 437.2 430 55.6
FAN11G3158 Fragaria x ananassa HOM05D003649 ORTHO05D004498 7.7e-120 434.9 439 55.6
arahy.Tifrunner.gnm1.ann1.V43L5Z Arachis hypogaea HOM05D003649 ORTHO05D004498 1.7e-119 433.7 417 54.9
BolC7t41946H Brassica oleracea HOM05D003649 ORTHO05D004498 1.7e-119 433.7 430 55.1
Glyma.03G190900 Glycine max HOM05D003649 ORTHO05D004498 2.9e-119 433.0 427 55.3
arahy.Tifrunner.gnm1.ann1.FP5V95 Arachis hypogaea HOM05D003649 ORTHO05D004498 3.8e-119 432.6 456 51.5
MD05G1209000 Malus domestica HOM05D003649 ORTHO05D004498 1.5e-118 430.6 385 61.0
AUR62035508 Chenopodium quinoa HOM05D003649 ORTHO05D004498 1.2e-117 427.6 435 54.5
FAN21G1332 Fragaria x ananassa HOM05D003649 ORTHO05D004498 2.1e-117 426.8 442 54.5
Psat2g144640 Pisum sativum HOM05D003649 ORTHO05D004498 3.6e-117 426.0 403 57.1
ATR1132G059 Amborella trichopoda HOM05D003649 ORTHO05D004498 4.7e-117 425.6 409 55.3
Haze_02513 Corylus avellana HOM05D003649 ORTHO05D004498 1.0e-116 424.5 473 53.1
A09p34660 Brassica napus HOM05D003649 ORTHO05D004498 3.0e-116 422.9 413 55.0
CDE06G0350 Ceratophyllum demersum HOM05D003649 ORTHO05D004498 8.8e-116 421.4 395 58.0
VMungo1127G0750 Vigna mungo HOM05D003649 ORTHO05D004498 1.5e-115 420.6 378 60.6
Solyc07g056550.3 Solanum lycopersicum HOM05D003649 ORTHO05D004498 2.0e-115 420.2 316 69.0
BraA09t39000Z Brassica rapa HOM05D003649 ORTHO05D004498 2.8e-114 416.4 413 54.0
Cpa.g.sc54.5 Carica papaya HOM05D003649 ORTHO05D004498 1.2e-112 411.0 440 52.5
arahy.Tifrunner.gnm1.ann1.956DWW Arachis hypogaea HOM05D003649 ORTHO05D004498 1.6e-112 410.6 408 53.2
BcaB07g32813 Brassica carinata HOM05D003649 ORTHO05D004498 4.5e-112 409.1 423 53.2
Lj1C808T9 Lonicera japonica HOM05D003649 ORTHO05D004498 3.8e-111 406.0 387 60.5
Haze_18856 Corylus avellana HOM05D003649 ORTHO05D004498 1.9e-110 403.7 495 50.1
BcaC05g27183 Brassica carinata HOM05D003649 ORTHO05D004498 4.1e-105 386.0 432 50.5
HPP92_001514 Vanilla planifolia HOM05D003649 ORTHO05D004498 2.0e-104 383.6 390 55.1
COL.COLO4_22663 Corchorus olitorius HOM05D003649 ORTHO05D004498 4.5e-104 382.5 409 53.5
Ah.13g066610 Amaranthus hybridus HOM05D003649 ORTHO05D004498 7.8e-104 381.7 376 56.9
Os09g0352400 Oryza sativa ssp. japonica HOM05D003649 ORTHO05D004498 1.7e-103 380.6 419 51.6
Pp3c10_5710 Physcomitrium patens HOM05D003649 ORTHO05D004498 6.6e-103 378.6 439 47.8
Thecc.09G275100 Theobroma cacao HOM05D003649 ORTHO05D004498 6.6e-103 378.6 334 60.5
Pp3c14_4070 Physcomitrium patens HOM05D003649 ORTHO05D004498 1.1e-102 377.9 410 50.5
PSO339G1025 Papaver somniferum HOM05D003649 ORTHO05D004498 3.3e-102 376.3 412 51.7
PSO339G4670 Papaver somniferum HOM05D003649 ORTHO05D004498 1.6e-101 374.0 412 51.5
Mapoly0048s0058 Marchantia polymorpha HOM05D003649 ORTHO05D004498 2.1e-101 373.6 320 58.8
vmacro10597 Vaccinium macrocarpon HOM05D003649 ORTHO05D004498 1.4e-100 370.9 473 48.0
Aqoxy5G01320 Aquilegia oxysepala HOM05D003649 ORTHO05D004498 1.9e-97 360.5 289 62.3
SMO358G0130 Selaginella moellendorffii HOM05D003649 ORTHO05D004498 3.2e-97 359.8 423 46.3
CBR_g984 Chara braunii HOM05D003649 ORTHO05D004498 9.2e-97 358.2 378 52.6
Zm00001eb065940 Zea mays HOM05D003649 ORTHO05D004498 1.0e-95 354.8 435 47.6
AagrBONN_evm.TU.Sc2ySwM_117.301 Anthoceros agrestis HOM05D003649 ORTHO05D004498 1.1e-94 351.3 293 57.7
BolC5t31810H Brassica oleracea HOM05D003649 ORTHO05D004498 8.0e-93 345.1 353 54.1
Gohir.A09G098001 Gossypium hirsutum HOM05D003649 ORTHO05D004498 2.4e-89 333.6 238 66.4
CANSAT80G0167 Cannabis sativa HOM05D003649 ORTHO05D004498 6.0e-88 328.9 250 66.0
MCO03G098 Micromonas commoda HOM05D003649 ORTHO05D004498 1.7e-87 327.4 406 47.3
PRCOL_00003636 Prasinoderma coloniale HOM05D003649 ORTHO05D004498 4.9e-82 309.3 345 49.3
Cre01.g063267 Chlamydomonas reinhardtii HOM05D003649 ORTHO05D004498 6.4e-82 308.9 346 48.3
Thhalv10028678m.g Eutrema salsugineum HOM05D003649 ORTHO05D004498 3.2e-81 306.6 404 45.5
A07p08470 Brassica napus HOM05D003649 ORTHO05D004498 6.0e-80 302.4 380 46.8
A07p11220 Brassica napus HOM05D003649 ORTHO05D004498 3.9e-79 299.7 393 45.3
BcaC06g35364 Brassica carinata HOM05D003649 ORTHO05D004498 1.5e-78 297.7 392 45.4
TPR.G9666 Trifolium pratense HOM05D003649 ORTHO05D004498 1.5e-78 297.7 266 57.9
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 7.6e-75 285.4 277 58.5
BraA07t28915Z Brassica rapa HOM05D003649 ORTHO05D004498 1.3e-74 284.6 397 43.8
C07p13190 Brassica napus HOM05D003649 ORTHO05D004498 2.2e-74 283.9 374 45.2
BolC7t41812H Brassica oleracea HOM05D003649 ORTHO05D004498 2.2e-74 283.9 372 45.4
C07p16930 Brassica napus HOM05D003649 ORTHO05D004498 1.7e-71 274.2 417 42.2
BolC7t42199H Brassica oleracea HOM05D003649 ORTHO05D004498 6.6e-71 272.3 356 46.1
BcaC06g35591 Brassica carinata HOM05D003649 ORTHO05D004498 2.5e-70 270.4 371 43.7
RcHm_v2.0_Chr6g0291881 Rosa chinensis HOM05D003649 ORTHO05D004498 4.2e-65 253.1 341 43.4
CANSAT54G0397 Cannabis sativa HOM05D003649 ORTHO05D004498 2.1e-61 240.7 184 65.8
Cfa024010 Carpinus fangiana HOM05D003649 ORTHO05D004498 1.0e-47 195.3 497 31.0
Atru.chr3.2262 Acer truncatum HOM05D003649 ORTHO05D004498 6.9e-44 182.6 142 63.4
Atru.chr3.2268 Acer truncatum HOM05D003649 ORTHO05D004498 6.9e-44 182.6 142 63.4
SEGI_32462 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 7.6e-43 179.1 125 65.6
Pp3c1_22730 Physcomitrium patens HOM05D003649 ORTHO05D004498 7.9e-40 169.1 153 55.6
arahy.Tifrunner.gnm1.ann1.KE86EX Arachis hypogaea HOM05D003649 ORTHO05D004498 2.4e-36 157.5 191 46.6
Sabra16G0258400 Salix brachista HOM05D003649 ORTHO05D004498 2.0e-30 137.9 137 53.3
SEGI_37931 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 4.1e-28 130.2 94 67.0
arahy.Tifrunner.gnm1.ann1.S7QI7K Arachis hypogaea HOM05D003649 ORTHO05D004498 7.7e-27 125.9 166 45.2
Actinidia13653 Actinidia chinensis HOM05D003649 ORTHO05D004498 1.4e-25 121.7 130 51.5
DCAR_030783 Daucus carota HOM05D003649 ORTHO05D004498 8.8e-23 112.5 158 53.8
RhsimUnG0127900 Rhododendron simsii HOM05D003649 ORTHO05D004498 1.5e-22 111.7 85 64.7
C07p16950 Brassica napus HOM05D003649 ORTHO05D027520 5.7e-22 109.8 215 39.1
AL6G50590 Arabidopsis lyrata HOM05D003649 ORTHO05D004498 2.2e-21 107.8 117 47.0
arahy.Tifrunner.gnm1.ann1.CT835L Arachis hypogaea HOM05D003649 ORTHO05D004498 4.1e-20 103.6 119 47.1
BolC9t56391H Brassica oleracea HOM05D003649 ORTHO05D004498 2.6e-19 100.9 99 50.5
SGA_v2.0_scaffold30G12442 Striga asiatica HOM05D003649 ORTHO05D004498 2.2e-18 97.8 97 61.9
A09p28020 Brassica napus HOM05D003649 ORTHO05D004498 2.5e-17 94.4 85 54.1
C09p35520 Brassica napus HOM05D003649 ORTHO05D004498 2.5e-17 94.4 94 48.9
BraA07t28632Z Brassica rapa HOM05D003649 ORTHO05D004498 9.4e-17 92.4 101 46.5
DCAR_030782 Daucus carota HOM05D003649 ORTHO05D004498 2.1e-16 91.3 67 67.2
BcaC05g27926 Brassica carinata HOM05D003649 ORTHO05D004498 4.8e-13 80.1 326 27.0
BolC7t42200H Brassica oleracea HOM05D003649 ORTHO05D027520 5.3e-12 76.6 117 40.2
SEGI_11889 Sequoiadendron giganteum HOM05D003649 ORTHO05D004498 6.5e-10 69.7 129 40.3
SGA_v2.0_scaffold24G10283 Striga asiatica HOM05D003649 ORTHO05D031702 6.5e-10 69.7 47 70.2
BcaC04g21367 Brassica carinata HOM05D001554 ORTHO05D001481 8.5e-10 69.3 55 54.5
C09p32650 Brassica napus HOM05D003649 ORTHO05D004498 8.5e-10 69.3 55 54.5
C09p35530 Brassica napus HOM05D003649 ORTHO05D004498 1.0e-07 62.4 206 32.5
BolC7t42195H Brassica oleracea HOM05D003649 ORTHO05D040526 1.4e-07 62.0 99 39.4
C07p16940 Brassica napus HOM05D003649 ORTHO05D027520 2.0e-06 58.2 60 51.7
MBI19_g34544_MAGBIO Magnolia biondii HOM05D000961 ORTHO05D000841 2.0e-06 58.2 39 66.7
Atru.chr3.2269 Acer truncatum HOM05D003649 ORTHO05D004498 9.7e-06 55.8 72 51.4


User provided reference genes

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