Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00637 Erythranthe guttata HOM05D004607 ORTHO05D005836 3.2e-69 265.0 139 100.0
Migut.C01149 Erythranthe guttata HOM05D004607 ORTHO05D005836 7.5e-66 253.8 139 95.7
Migut.K01195 Erythranthe guttata HOM05D004607 ORTHO05D005836 6.3e-65 250.8 139 93.5
Migut.G00971 Erythranthe guttata HOM05D004607 ORTHO05D005836 7.0e-64 247.3 139 92.8
Migut.N00197 Erythranthe guttata HOM05D004607 ORTHO05D005836 1.7e-62 242.7 163 83.4
MSTRG.1461 Avicennia marina HOM05D004607 ORTHO05D005836 1.2e-50 203.4 134 78.4
Dinv40187 Davidia involucrata HOM05D004607 ORTHO05D005836 5.0e-46 188.0 139 67.6
Actinidia17362 Actinidia chinensis HOM05D004607 ORTHO05D005836 7.3e-45 184.1 138 67.4
CiPaw.08G181500 Carya illinoinensis HOM05D004607 ORTHO05D005836 8.0e-44 180.6 133 65.4
Dinv08165 Davidia involucrata HOM05D004607 ORTHO05D005836 2.3e-43 179.1 139 64.7
Potri.005G101300 Populus trichocarpa HOM05D004607 ORTHO05D005836 2.3e-43 179.1 135 65.9
Solyc02g082710.3 Solanum lycopersicum HOM05D004607 ORTHO05D005836 3.1e-43 178.7 138 65.2
Sopen02g027460 Solanum pennellii HOM05D004607 ORTHO05D005836 3.1e-43 178.7 138 65.2
Actinidia22900 Actinidia chinensis HOM05D004607 ORTHO05D005836 4.0e-43 178.3 129 68.2
MD02G1116800 Malus domestica HOM05D004607 ORTHO05D005836 4.0e-43 178.3 128 66.4
Nitab4.5_0011694g0010 Nicotiana tabacum HOM05D004607 ORTHO05D005836 5.2e-43 177.9 138 65.2
Peaxi162Scf01051g00133 Petunia axillaris HOM05D004607 ORTHO05D005836 6.8e-43 177.6 143 62.9
Prupe.7G182100 Prunus persica HOM05D004607 ORTHO05D005836 6.8e-43 177.6 128 68.8
CSS0035278 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 8.9e-43 177.2 138 65.2
Lsat_1_v5_gn_3_68061 Lactuca sativa HOM05D004607 ORTHO05D005836 2.0e-42 176.0 140 60.7
MD02G1117000 Malus domestica HOM05D004607 ORTHO05D005836 2.0e-42 176.0 128 65.6
CSS0013050 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 2.6e-42 175.6 134 65.7
FvH4_1g10350 Fragaria vesca HOM05D004607 ORTHO05D005836 4.4e-42 174.9 130 64.6
CAN.G1238.9 Capsicum annuum HOM05D004607 ORTHO05D005836 5.8e-42 174.5 135 65.2
Hma1.2p1_0300F.1_g118020 Hydrangea macrophylla HOM05D004607 ORTHO05D005836 5.8e-42 174.5 136 64.0
FAN28G2666 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.3e-41 173.3 130 63.8
Nitab4.5_0000467g0060 Nicotiana tabacum HOM05D004607 ORTHO05D005836 1.7e-41 172.9 135 62.2
RcHm_v2.0_Chr2g0097211 Rosa chinensis HOM05D004607 ORTHO05D005836 2.2e-41 172.6 130 63.8
SGA_v2.0_scaffold52G18984 Striga asiatica HOM05D004607 ORTHO05D005836 3.7e-41 171.8 116 74.1
unitig_26.g9912 Utricularia gibba HOM05D004607 ORTHO05D005836 6.4e-41 171.0 137 62.0
GSVIVG01026644001 Vitis vinifera HOM05D004607 ORTHO05D005836 6.4e-41 171.0 135 65.2
Glyma.09G198400 Glycine max HOM05D004607 ORTHO05D005836 2.4e-40 169.1 132 64.4
Lalb_Chr05g0229661 Lupinus albus HOM05D004607 ORTHO05D005836 3.2e-40 168.7 133 63.9
Sopen02g012590 Solanum pennellii HOM05D004607 ORTHO05D005836 4.1e-40 168.3 135 60.7
CANSAT80G1685 Cannabis sativa HOM05D004607 ORTHO05D005836 7.0e-40 167.5 133 60.9
CANSAT80G2088 Cannabis sativa HOM05D004607 ORTHO05D005836 7.0e-40 167.5 133 60.9
Cc07_g11810 Coffea canephora HOM05D004607 ORTHO05D005836 7.0e-40 167.5 135 63.0
Solyc02g038815.1 Solanum lycopersicum HOM05D004607 ORTHO05D005836 7.0e-40 167.5 135 60.0
TWI73G0051 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 9.2e-40 167.2 133 62.4
CiPaw.07G003100 Carya illinoinensis HOM05D004607 ORTHO05D005836 1.2e-39 166.8 129 63.6
SalBow7G0705 Salvia bowleyana HOM05D004607 ORTHO05D005836 1.2e-39 166.8 184 53.8
TWI09G0436 Tripterygium wilfordii HOM05D004607 ORTHO05D005836 1.6e-39 166.4 131 62.6
HanXRQChr16g0531851 Helianthus annuus HOM05D004607 ORTHO05D005836 2.7e-39 165.6 139 58.3
HanXRQChr09g0259831 Helianthus annuus HOM05D004607 ORTHO05D005836 3.5e-39 165.2 138 58.0
SalBow7G2290 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.5e-39 165.2 179 55.9
Eucgr.I00568 Eucalyptus grandis HOM05D004607 ORTHO05D005836 7.8e-39 164.1 133 63.2
Lj4g0003075 Lotus japonicus HOM05D004607 ORTHO05D005836 7.8e-39 164.1 130 61.5
Lsat_1_v5_gn_8_112021 Lactuca sativa HOM05D000005 ORTHO05D000012 1.3e-38 163.3 138 56.5
BolC8t48369H Brassica oleracea HOM05D004607 ORTHO05D005836 1.7e-38 162.9 132 60.6
BraA08t33239Z Brassica rapa HOM05D004607 ORTHO05D005836 1.7e-38 162.9 132 60.6
Ca_02856_v3 Cicer arietinum L. HOM05D004607 ORTHO05D005836 2.3e-38 162.5 132 61.4
SalBow7G4137 Salvia bowleyana HOM05D004607 ORTHO05D005836 3.0e-38 162.2 187 53.5
CsaV3_3G000280 Cucumis sativus L. HOM05D004607 ORTHO05D005836 5.0e-38 161.4 135 57.8
CARHR222820 Cardamine hirsuta HOM05D004607 ORTHO05D005836 1.9e-37 159.5 132 59.1
PGR042G1958 Punica granatum HOM05D004607 ORTHO05D005836 1.9e-37 159.5 130 60.0
Medtr8g073600 Medicago truncatula HOM05D004607 ORTHO05D005836 2.5e-37 159.1 132 60.6
C07p47890 Brassica napus HOM05D004607 ORTHO05D005836 4.3e-37 158.3 132 57.6
BolC7t45311H Brassica oleracea HOM05D004607 ORTHO05D005836 4.3e-37 158.3 132 57.6
Sed0016741 Sechium edule HOM05D004607 ORTHO05D005836 4.3e-37 158.3 131 58.0
Carub.0007s2507 Capsella rubella HOM05D004607 ORTHO05D005836 5.6e-37 157.9 130 60.0
A03p49830 Brassica napus HOM05D004607 ORTHO05D005836 7.3e-37 157.5 132 57.6
BraA03t14078Z Brassica rapa HOM05D004607 ORTHO05D005836 7.3e-37 157.5 132 57.6
Cpa.g.c27001.3 Carica papaya HOM05D004607 ORTHO05D005836 1.2e-36 156.8 131 61.8
ECA246G3880 Erigeron canadensis HOM05D004607 ORTHO05D005836 1.6e-36 156.4 133 57.1
Thhalv10026376m.g Eutrema salsugineum HOM05D004607 ORTHO05D005836 2.1e-36 156.0 132 59.1
AL7G38550 Arabidopsis lyrata HOM05D004607 ORTHO05D005836 2.8e-36 155.6 130 60.0
Gorai.010G212400 Gossypium raimondii HOM05D004607 ORTHO05D005836 3.6e-36 155.2 132 59.8
Nitab4.5_0000702g0180 Nicotiana tabacum HOM05D004607 ORTHO05D005836 4.7e-36 154.8 128 62.5
FAN26G2101 Fragaria x ananassa HOM05D004607 ORTHO05D005836 8.1e-36 154.1 160 50.6
Sp7g14990 Schrenkiella parvula HOM05D004607 ORTHO05D005836 1.1e-35 153.7 132 56.8
Aa31LG2G12510 Aethionema arabicum HOM05D004607 ORTHO05D005836 4.0e-35 151.8 129 56.6
THA.LOC104819160 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 5.2e-35 151.4 132 53.8
THA.LOC104826422 Tarenaya hassleriana HOM05D004607 ORTHO05D005836 6.8e-35 151.0 130 57.7
AT4G16444 Arabidopsis thaliana HOM05D004607 ORTHO05D005836 1.5e-34 149.8 130 58.5
BcaC07g37988 Brassica carinata HOM05D004607 ORTHO05D005836 1.5e-34 149.8 133 57.9
PGSC0003DMG400001520 Solanum tuberosum HOM05D004607 ORTHO05D005836 1.5e-34 149.8 115 66.1
Haze_03663 Corylus avellana HOM05D004607 ORTHO05D005836 2.0e-34 149.4 118 63.6
A08p12190 Brassica napus HOM05D004607 ORTHO05D005836 2.6e-34 149.1 157 51.0
Phvul.003G269900 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 3.4e-34 148.7 132 56.8
Nn2g14487 Nelumbo nucifera HOM05D004607 ORTHO05D005836 4.4e-34 148.3 139 54.7
Haze_03657 Corylus avellana HOM05D004607 ORTHO05D005836 5.8e-34 147.9 115 65.2
CDE05G3414 Ceratophyllum demersum HOM05D004607 ORTHO05D005836 7.5e-34 147.5 131 55.0
Lalb_Chr09g0324751 Lupinus albus HOM05D004607 ORTHO05D005836 9.8e-34 147.1 130 59.2
Haze_04009 Corylus avellana HOM05D004607 ORTHO05D005836 1.3e-33 146.7 118 61.0
Psat0s2561g0240 Pisum sativum HOM05D004607 ORTHO05D005836 2.9e-33 145.6 127 60.6
Glyma.11G085750 Glycine max HOM05D004607 ORTHO05D005836 6.4e-33 144.4 133 56.4
SGA_v2.0_scaffold24G10477 Striga asiatica HOM05D004607 ORTHO05D005836 6.4e-33 144.4 87 74.7
Glyma.01G158900 Glycine max HOM05D004607 ORTHO05D005836 8.3e-33 144.1 133 56.4
Lalb_Chr05g0214781 Lupinus albus HOM05D004607 ORTHO05D005836 8.3e-33 144.1 130 58.5
FvH4_1g10370 Fragaria vesca HOM05D004607 ORTHO05D005836 2.4e-32 142.5 140 54.3
Os06g0198700 Oryza sativa ssp. japonica HOM05D004607 ORTHO05D005836 7.1e-32 141.0 131 52.7
vmacro23502 Vaccinium macrocarpon HOM05D004607 ORTHO05D005836 9.2e-32 140.6 115 60.9
Zm00001eb320900 Zea mays HOM05D004607 ORTHO05D005836 9.2e-32 140.6 136 50.7
Lj2g0013322 Lotus japonicus HOM05D004607 ORTHO05D005836 3.5e-31 138.7 131 54.2
MBI11_g22240_MAGBIO Magnolia biondii HOM05D004607 ORTHO05D005836 4.6e-31 138.3 132 53.8
ATR0807G168 Amborella trichopoda HOM05D004607 ORTHO05D005836 6.0e-31 137.9 131 53.4
Phvul.002G116550 Phaseolus vulgaris HOM05D004607 ORTHO05D005836 7.8e-31 137.5 132 50.8
Sc16g0000240 Simmondsia chinensis HOM05D004607 ORTHO05D005836 2.3e-30 136.0 115 63.5
Aqoxy5G01013 Aquilegia oxysepala HOM05D004607 ORTHO05D005836 3.0e-30 135.6 109 60.6
Thecc.01G005800 Theobroma cacao HOM05D004607 ORTHO05D005836 3.9e-30 135.2 114 58.8
Zm00001eb373950 Zea mays HOM05D004607 ORTHO05D005836 3.9e-30 135.2 136 49.3
Psat4g104720 Pisum sativum HOM05D004607 ORTHO05D026060 5.1e-30 134.8 120 58.3
Ciclev10016602m.g Citrus clementina HOM05D004607 ORTHO05D005836 8.6e-30 134.0 118 57.6
arahy.Tifrunner.gnm1.ann1.322DBQ Arachis hypogaea HOM05D004607 ORTHO05D005836 1.1e-29 133.7 126 52.4
arahy.Tifrunner.gnm1.ann1.WAU4HL Arachis hypogaea HOM05D004607 ORTHO05D005836 1.1e-29 133.7 126 52.4
ClCG10G000250 Citrullus lanatus HOM05D004607 ORTHO05D005836 2.5e-29 132.5 115 57.4
PSO210G1290 Papaver somniferum HOM05D004607 ORTHO05D005836 4.3e-29 131.7 135 47.4
PSO761G0125 Papaver somniferum HOM05D004607 ORTHO05D005836 4.3e-29 131.7 135 47.4
TPR.G33861 Trifolium pratense HOM05D004607 ORTHO05D005836 5.6e-29 131.3 134 52.2
TAR628G0874 Trochodendron aralioides HOM05D004607 ORTHO05D005836 2.1e-28 129.4 112 56.2
Rhsim10G0196300 Rhododendron simsii HOM05D004607 ORTHO05D005836 3.6e-28 128.6 115 58.3
Sabra05G0083700 Salix brachista HOM05D004607 ORTHO05D005836 6.2e-28 127.9 98 69.4
unitig_749.g13934 Utricularia gibba HOM05D004607 ORTHO05D005836 6.2e-28 127.9 103 62.1
AUR62031422 Chenopodium quinoa HOM05D004607 ORTHO05D005836 1.4e-27 126.7 118 55.9
Duzib187G1597 Durio zibethinus HOM05D004607 ORTHO05D005836 4.0e-27 125.2 127 54.3
BcaNung00194 Brassica carinata HOM05D004607 ORTHO05D005836 5.2e-27 124.8 132 50.8
EL10Ac3g05419 Beta vulgaris HOM05D004607 ORTHO05D005836 1.2e-26 123.6 110 58.2
ECA232G4775 Erigeron canadensis HOM05D004607 ORTHO05D005836 2.0e-26 122.9 113 56.6
MD15G1231800 Malus domestica HOM05D004607 ORTHO05D005836 4.4e-26 121.7 87 59.8
TPR.G21990 Trifolium pratense HOM05D004607 ORTHO05D005836 5.8e-26 121.3 132 48.5
QL06p052929 Quercus lobata HOM05D004607 ORTHO05D005836 2.2e-25 119.4 86 61.6
CDE05G1839 Ceratophyllum demersum HOM05D001594 ORTHO05D006997 2.9e-25 119.0 140 48.6
Atru.chr8.743 Acer truncatum HOM05D004607 ORTHO05D005836 3.7e-25 118.6 95 64.2
AUR62021120 Chenopodium quinoa HOM05D004607 ORTHO05D005836 8.4e-25 117.5 123 54.5
Duzib264G0749 Durio zibethinus HOM05D004607 ORTHO05D005836 1.9e-24 116.3 98 61.2
HPP92_002453 Vanilla planifolia HOM05D004607 ORTHO05D005836 1.9e-24 116.3 135 46.7
Hund00045 Selenicereus undatus HOM05D004607 ORTHO05D005836 9.2e-24 114.0 129 51.2
Nitab4.5_0001365g0040 Nicotiana tabacum HOM05D004607 ORTHO05D005836 2.1e-23 112.8 111 53.2
CAN.G328.18 Capsicum annuum HOM05D004607 ORTHO05D005836 1.3e-22 110.2 91 58.2
PGSC0003DMG400017476 Solanum tuberosum HOM05D004607 ORTHO05D005836 8.6e-22 107.5 84 54.8
COL.COLO4_13415 Corchorus olitorius HOM05D004607 ORTHO05D005836 1.1e-21 107.1 98 56.1
Manes.14G160966 Manihot esculenta HOM05D004607 ORTHO05D005836 7.3e-21 104.4 133 43.6
CSS0045229 Camellia sinensis var. sinensis HOM05D004607 ORTHO05D005836 1.5e-18 96.7 138 44.2
Peaxi162Scf00580g00027 Petunia axillaris HOM05D004607 ORTHO05D005836 2.2e-17 92.8 135 42.2
TAR376G0723 Trochodendron aralioides HOM05D004607 ORTHO05D005836 1.6e-12 76.6 72 56.9
Mapoly0007s0238 Marchantia polymorpha HOM05D004607 ORTHO05D005836 2.1e-12 76.3 134 35.1
Pp3c7_8860 Physcomitrium patens HOM05D004607 ORTHO05D005836 3.4e-10 68.9 140 35.0
Gohir.D06G180900 Gossypium hirsutum HOM05D004607 ORTHO05D005836 6.4e-09 64.7 45 77.8
VMungo1215G0163 Vigna mungo HOM05D004607 ORTHO05D005836 8.4e-09 64.3 74 54.1
QL06p052933 Quercus lobata HOM05D004607 ORTHO05D005836 1.4e-08 63.5 41 82.9
Duzib147G0723 Durio zibethinus HOM05D004607 ORTHO05D005836 1.9e-08 63.2 45 73.3
Gohir.A06G172006 Gossypium hirsutum HOM05D004607 ORTHO05D005836 2.4e-08 62.8 45 75.6
Glyma.16G116500 Glycine max HOM05D004607 ORTHO05D005836 4.2e-08 62.0 45 73.3
MELO3C013722.2 Cucumis melo HOM05D004607 ORTHO05D005836 5.4e-08 61.6 45 71.1
AagrBONN_evm.TU.Sc2ySwM_362.230 Anthoceros agrestis HOM05D004607 ORTHO05D005836 7.1e-08 61.2 106 37.7
FAN19G1486 Fragaria x ananassa HOM05D004607 ORTHO05D005836 1.2e-07 60.5 43 76.7
Cre09.g387504 Chlamydomonas reinhardtii HOM05D004607 ORTHO05D005836 1.6e-07 60.1 132 32.6
VMungo0251G1148 Vigna mungo HOM05D004607 ORTHO05D005836 3.9e-06 55.5 45 68.9
VMungo0703G0001 Vigna mungo HOM05D004607 ORTHO05D005836 3.9e-06 55.5 45 68.9
FAN23G1441 Fragaria x ananassa HOM05D004607 ORTHO05D005836 5.1e-06 55.1 43 69.8


User provided reference genes

Program Settings