Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.3e-64 249.6 126 100.0
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.7e-46 188.7 108 88.9
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.9e-45 184.9 108 87.0
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 2.5e-44 182.2 108 86.1
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 3.2e-39 165.2 108 75.9
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.0e-37 160.2 108 71.3
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.7e-37 159.5 108 71.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.3e-37 159.1 108 70.4
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 2.3e-37 159.1 108 72.2
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 5.1e-37 157.9 108 72.2
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 5.1e-37 157.9 108 70.4
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 6.6e-37 157.5 105 71.4
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 3.3e-36 155.2 108 71.3
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 3.3e-36 155.2 124 66.1
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 4.3e-36 154.8 108 67.6
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 4.3e-36 154.8 108 67.6
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 4.3e-36 154.8 108 67.6
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 5.6e-36 154.5 108 68.5
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 7.3e-36 154.1 108 70.4
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 7.3e-36 154.1 108 68.5
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.8e-35 152.1 105 70.5
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 3.6e-35 151.8 105 68.6
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 4.7e-35 151.4 106 67.0
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 6.2e-35 151.0 108 67.6
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 6.2e-35 151.0 103 70.9
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.2e-35 151.0 108 67.6
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 6.2e-35 151.0 108 66.7
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.1e-34 150.2 108 66.7
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.8e-34 149.4 108 66.7
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.8e-34 149.4 104 68.3
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.8e-34 149.4 108 66.7
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.8e-34 149.4 103 70.9
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 2.3e-34 149.1 108 66.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 3.1e-34 148.7 105 68.6
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 3.1e-34 148.7 108 67.6
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.1e-34 148.7 108 66.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.0e-34 148.3 105 67.6
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 4.0e-34 148.3 108 68.5
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 5.2e-34 147.9 108 65.7
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 6.8e-34 147.5 108 66.7
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 6.8e-34 147.5 105 68.6
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 6.8e-34 147.5 105 66.7
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 1.5e-33 146.4 105 66.7
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.5e-33 146.4 112 65.2
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.6e-33 145.6 108 64.8
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.6e-33 145.6 108 64.8
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 2.6e-33 145.6 104 66.3
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 3.4e-33 145.2 108 63.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 3.4e-33 145.2 108 63.0
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 4.4e-33 144.8 108 65.7
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 4.4e-33 144.8 112 64.3
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 4.4e-33 144.8 105 65.7
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 5.8e-33 144.4 108 63.9
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 5.8e-33 144.4 108 66.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 5.8e-33 144.4 104 64.4
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 9.9e-33 143.7 108 64.8
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 63.0
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 63.0
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 63.0
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 63.0
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 63.0
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 2.2e-32 142.5 108 62.0
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 3.7e-32 141.7 108 62.0
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 3.7e-32 141.7 108 62.0
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 8.4e-32 140.6 108 62.0
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 1.1e-31 140.2 108 62.0
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.4e-31 139.8 104 63.5
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 1.4e-31 139.8 104 64.4
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.4e-31 139.0 105 64.8
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 2.4e-31 139.0 105 64.8
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 3.2e-31 138.7 108 62.0
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 7.1e-31 137.5 105 63.8
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 9.2e-31 137.1 108 61.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 9.2e-31 137.1 108 60.2
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 9.2e-31 137.1 105 61.0
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 6.0e-30 134.4 108 58.3
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 7.8e-30 134.0 103 63.1
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.0e-29 133.7 107 60.7
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 1.7e-29 132.9 137 51.1
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 2.3e-29 132.5 105 58.1
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 5.1e-29 131.3 100 65.0
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 5.1e-29 131.3 101 60.4
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 5.1e-29 131.3 105 61.0
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 1.9e-28 129.4 109 58.7
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 3.3e-28 128.6 101 59.4
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.6e-28 127.9 101 59.4
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 1.2e-27 126.7 108 55.6
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 3.6e-27 125.2 108 53.7
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 3.6e-27 125.2 108 53.7
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 6.2e-27 124.4 108 53.7
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 3.4e-25 118.6 84 64.3
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.4e-25 118.6 104 54.8
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 4.9e-24 114.8 163 41.1
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 3.2e-23 112.1 74 74.3
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.2e-22 110.2 74 71.6
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.2e-22 110.2 74 71.6
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.7e-22 109.0 98 52.0
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 4.6e-22 108.2 74 71.6
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 7.8e-22 107.5 122 42.6
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.0e-21 105.5 102 52.9
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.1e-21 104.8 105 57.1
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 5.1e-21 104.8 102 52.9
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.5e-20 103.2 82 61.0
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.9e-20 102.8 73 68.5
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 4.3e-20 101.7 106 47.2
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.3e-19 100.1 74 63.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 1.4e-18 96.7 102 52.0
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.8e-18 96.3 74 62.2
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 3.1e-18 95.5 93 51.6
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.2e-16 89.4 80 51.2
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.1e-15 87.0 73 54.8
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 5.4e-15 84.7 53 73.6


User provided reference genes

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