Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00600 Erythranthe guttata HOM05D003899 ORTHO05D003655 3.2e-47 192.6 221 100.0
Dinv03732 Davidia involucrata HOM05D000043 ORTHO05D002577 4.6e-17 92.4 84 57.1
Dinv24330 Davidia involucrata HOM05D003899 ORTHO05D003655 2.5e-15 86.7 86 53.5
Cpa.g.sc42.130 Carica papaya HOM05D003899 ORTHO05D003655 1.4e-13 80.9 82 51.2
Nn1g06205 Nelumbo nucifera HOM05D003899 ORTHO05D003655 1.4e-13 80.9 84 52.4
Rhsim10G0136200 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.1e-13 79.7 83 53.0
RhsimUnG0132700 Rhododendron simsii HOM05D003899 ORTHO05D003655 3.1e-13 79.7 83 53.0
DCAR_001362 Daucus carota HOM05D003899 ORTHO05D003655 4.0e-13 79.3 83 42.2
Nn5g28622 Nelumbo nucifera HOM05D003899 ORTHO05D003655 8.9e-13 78.2 87 49.4
SGA_v2.0_scaffold73G24343 Striga asiatica HOM05D003899 ORTHO05D003655 4.4e-12 75.9 56 69.6
Hma1.2p1_0528F.1_g173010 Hydrangea macrophylla HOM05D003899 ORTHO05D003655 7.6e-12 75.1 75 52.0
Lj2C604T4 Lonicera japonica HOM05D003899 ORTHO05D003655 3.8e-11 72.8 85 45.9
Actinidia06640 Actinidia chinensis HOM05D003899 ORTHO05D003655 4.9e-11 72.4 83 43.4
Thecc.01G128000 Theobroma cacao HOM05D003899 ORTHO05D003655 1.4e-10 70.9 86 45.3
Lj2C604T3 Lonicera japonica HOM05D003899 ORTHO05D003655 1.9e-10 70.5 85 44.7
Aqoxy3G00817 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 2.4e-10 70.1 87 42.5
CANSAT11G1227 Cannabis sativa HOM05D003899 ORTHO05D003655 2.4e-10 70.1 81 42.0
COL.COLO4_14024 Corchorus olitorius HOM05D003899 ORTHO05D003655 4.1e-10 69.3 79 45.6
Atru.chr4.839 Acer truncatum HOM05D003899 ORTHO05D003655 7.1e-10 68.6 84 50.0
Nn5g28623 Nelumbo nucifera HOM05D003899 ORTHO05D003655 7.1e-10 68.6 84 44.0
Potri.005G060700 Populus trichocarpa HOM05D003899 ORTHO05D003655 9.2e-10 68.2 84 39.3
TAR381G0487 Trochodendron aralioides HOM05D003899 ORTHO05D003655 1.2e-09 67.8 85 44.7
Gohir.A11G224804 Gossypium hirsutum HOM05D003899 ORTHO05D003655 1.6e-09 67.4 80 43.8
Gorai.003G068900 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.7e-09 66.6 80 43.8
Gohir.D11G228940 Gossypium hirsutum HOM05D003899 ORTHO05D003655 3.5e-09 66.2 80 42.5
Potri.007G108100 Populus trichocarpa HOM05D003899 ORTHO05D003655 4.6e-09 65.9 85 42.4
TWI79G1413 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 1.3e-08 64.3 52 57.7
THA.LOC104800071 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 3.0e-08 63.2 81 38.3
Aqoxy5G02188 Aquilegia oxysepala HOM05D003899 ORTHO05D003655 5.1e-08 62.4 88 38.6
Dinv41123 Davidia involucrata HOM05D000043 ORTHO05D002577 5.1e-08 62.4 85 41.2
COL.COLO4_08943 Corchorus olitorius HOM05D003899 ORTHO05D003655 6.6e-08 62.0 87 41.4
Dinv25809 Davidia involucrata HOM05D003899 ORTHO05D003655 6.6e-08 62.0 47 51.1
Sabra07G0088500 Salix brachista HOM05D000850 ORTHO05D000266 6.6e-08 62.0 85 40.0
FAN15G3500 Fragaria x ananassa HOM05D003899 ORTHO05D003655 8.6e-08 61.6 57 43.9
Ciclev10003780m.g Citrus clementina HOM05D003899 ORTHO05D003655 1.1e-07 61.2 82 43.9
HanXRQChr04g0125201 Helianthus annuus HOM05D003899 ORTHO05D003655 1.1e-07 61.2 84 31.0
Manes.12G153900 Manihot esculenta HOM05D003899 ORTHO05D003655 1.1e-07 61.2 87 40.2
DCAR_007049 Daucus carota HOM05D003899 ORTHO05D003655 1.5e-07 60.8 82 41.5
RcHm_v2.0_Chr6g0277141 Rosa chinensis HOM05D003899 ORTHO05D003655 1.5e-07 60.8 57 43.9
Sp1g41920 Schrenkiella parvula HOM05D003899 ORTHO05D003655 1.5e-07 60.8 82 37.8
FvH4_2g14670 Fragaria vesca HOM05D003899 ORTHO05D003655 1.9e-07 60.5 57 43.9
FAN24G0119 Fragaria x ananassa HOM05D003899 ORTHO05D003655 1.9e-07 60.5 57 43.9
Lalb_Chr25g0281721 Lupinus albus HOM05D003899 ORTHO05D003655 1.9e-07 60.5 47 55.3
Manes.18G087500 Manihot esculenta HOM05D003899 ORTHO05D003655 1.9e-07 60.5 83 37.3
Duzib093G0910 Durio zibethinus HOM05D003899 ORTHO05D003655 2.5e-07 60.1 84 38.1
Nn1g06203 Nelumbo nucifera HOM05D003899 ORTHO05D003655 3.3e-07 59.7 42 59.5
Psat6g039960 Pisum sativum HOM05D003899 ORTHO05D003655 4.3e-07 59.3 80 38.8
MD10G1014900 Malus domestica HOM05D003899 ORTHO05D003655 5.6e-07 58.9 81 37.0
PSO017G4320 Papaver somniferum HOM05D003899 ORTHO05D003655 5.6e-07 58.9 83 39.8
Haze_17704 Corylus avellana HOM05D003899 ORTHO05D003655 7.3e-07 58.5 72 40.3
Gohir.D02G072400 Gossypium hirsutum HOM05D003899 ORTHO05D003655 7.3e-07 58.5 84 36.9
MBI06_g43012_MAGBIO Magnolia biondii HOM05D003899 ORTHO05D003655 7.3e-07 58.5 84 33.3
MD05G1014900 Malus domestica HOM05D003899 ORTHO05D003655 7.3e-07 58.5 69 46.4
CAN.G375.87 Capsicum annuum HOM05D003899 ORTHO05D003655 9.6e-07 58.2 52 55.8
FAN20G0153 Fragaria x ananassa HOM05D003899 ORTHO05D003655 9.6e-07 58.2 47 55.3
PSO170G2020 Papaver somniferum HOM05D003899 ORTHO05D003655 9.6e-07 58.2 80 38.8
QL02p025328 Quercus lobata HOM05D003899 ORTHO05D003655 9.6e-07 58.2 82 36.6
CiPaw.16G017800 Carya illinoinensis HOM05D003899 ORTHO05D003655 1.2e-06 57.8 53 43.4
Prupe.8G018800 Prunus persica HOM05D003899 ORTHO05D003655 1.2e-06 57.8 53 50.9
QL02p025320 Quercus lobata HOM05D003899 ORTHO05D003655 1.2e-06 57.8 82 36.6
Sc02g0004420 Simmondsia chinensis HOM05D003899 ORTHO05D003655 1.6e-06 57.4 52 38.5
THA.LOC104806849 Tarenaya hassleriana HOM05D003899 ORTHO05D003655 1.6e-06 57.4 67 37.3
Gohir.A02G066500 Gossypium hirsutum HOM05D003899 ORTHO05D003655 2.1e-06 57.0 83 33.7
Nitab4.5_0008388g0020 Nicotiana tabacum HOM05D003899 ORTHO05D003655 2.1e-06 57.0 81 42.0
EL10Ac7g17632 Beta vulgaris HOM05D003899 ORTHO05D003655 2.8e-06 56.6 82 42.7
BcaB03g16849 Brassica carinata HOM05D003899 ORTHO05D003655 2.8e-06 56.6 82 35.4
C07p00500 Brassica napus HOM05D003899 ORTHO05D003655 2.8e-06 56.6 82 35.4
Migut.N03236 Erythranthe guttata HOM05D003899 ORTHO05D003655 2.8e-06 56.6 81 39.5
Gorai.005G081600 Gossypium raimondii HOM05D003899 ORTHO05D003655 2.8e-06 56.6 84 35.7
EL10Ac6g15278 Beta vulgaris HOM05D003899 ORTHO05D003655 3.6e-06 56.2 57 49.1
TWI32G0122 Tripterygium wilfordii HOM05D003899 ORTHO05D003655 3.6e-06 56.2 75 40.0
BcaB07g33974 Brassica carinata HOM05D003899 ORTHO05D003655 6.2e-06 55.5 59 40.7
CSS0023777 Camellia sinensis var. sinensis HOM05D003899 ORTHO05D003655 6.2e-06 55.5 83 39.8
AUR62017911 Chenopodium quinoa HOM05D003899 ORTHO05D003655 6.2e-06 55.5 83 39.8
AUR62043709 Chenopodium quinoa HOM05D003899 ORTHO05D003655 6.2e-06 55.5 83 39.8
ClCG08G006450 Citrullus lanatus HOM05D000058 ORTHO05D000077 6.2e-06 55.5 54 51.9
Duzib264G1053 Durio zibethinus HOM05D003899 ORTHO05D003655 6.2e-06 55.5 84 39.3
arahy.Tifrunner.gnm1.ann1.UE47UQ Arachis hypogaea HOM05D003899 ORTHO05D003655 8.1e-06 55.1 45 55.6
ECA238G1798 Erigeron canadensis HOM05D003899 ORTHO05D003655 8.1e-06 55.1 57 40.4


User provided reference genes

Program Settings