Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 5.8e-104 380.9 200 100.0
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 8.7e-92 340.5 200 91.5
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.4e-89 333.2 199 90.5
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 2.5e-62 242.7 204 67.6
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 1.0e-55 220.7 212 61.8
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 2.9e-55 219.2 204 58.3
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 6.3e-50 201.4 216 53.2
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 3.8e-47 192.2 199 56.8
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 8.6e-47 191.0 193 54.4
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 2.5e-46 189.5 205 56.1
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 3.3e-46 189.1 201 54.2
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 2.1e-45 186.4 221 54.8
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 3.6e-45 185.7 201 54.7
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 8.0e-45 184.5 210 51.4
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 2.3e-44 183.0 211 51.2
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 6.8e-44 181.4 209 52.6
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.2e-43 180.6 188 54.3
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.2e-43 180.6 188 54.8
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 1.2e-43 180.6 191 54.5
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 1.5e-43 180.3 193 53.9
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 2.0e-43 179.9 189 56.1
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 7.5e-43 177.9 204 52.9
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 9.8e-43 177.6 204 51.0
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 5.4e-41 171.8 207 50.2
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 7.0e-41 171.4 189 53.4
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 7.0e-41 171.4 213 48.8
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 1.2e-40 170.6 187 51.3
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 2.7e-40 169.5 213 50.7
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 1.0e-39 167.5 204 48.5
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 1.3e-39 167.2 203 49.8
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 5.0e-39 165.2 200 51.0
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 1.5e-38 163.7 194 51.5
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 1.5e-38 163.7 182 53.8
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 3.3e-38 162.5 175 53.7
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 9.5e-38 161.0 178 53.4
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 9.5e-38 161.0 200 49.5
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 1.6e-37 160.2 223 47.1
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.6e-37 160.2 203 50.7
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.6e-37 160.2 190 50.0
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 1.6e-37 160.2 198 47.5
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 2.8e-37 159.5 184 50.0
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 8.0e-37 157.9 184 49.5
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 8.0e-37 157.9 181 51.9
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 8.0e-37 157.9 190 48.4
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 1.4e-36 157.1 199 52.3
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 3.0e-36 156.0 186 51.1
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 4.0e-36 155.6 184 48.9
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 8.9e-36 154.5 195 50.3
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 1.2e-35 154.1 202 46.0
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 2.6e-35 152.9 184 47.8
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 2.6e-35 152.9 202 45.5
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 3.4e-35 152.5 166 53.0
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 3.4e-35 152.5 191 50.3
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 4.4e-35 152.1 193 48.7
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 4.4e-35 152.1 187 46.5
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 9.8e-35 151.0 186 47.3
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 1.3e-34 150.6 193 50.3
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 1.7e-34 150.2 201 49.8
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 1.7e-34 150.2 187 48.7
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 2.9e-34 149.4 203 44.8
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 2.9e-34 149.4 203 44.8
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 3.7e-34 149.1 184 47.3
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 6.4e-34 148.3 179 48.6
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 6.4e-34 148.3 192 45.3
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 6.4e-34 148.3 185 46.5
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 8.3e-34 147.9 188 45.7
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 8.3e-34 147.9 204 44.6
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 1.8e-33 146.7 187 47.1
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 2.4e-33 146.4 207 44.0
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 5.4e-33 145.2 183 46.4
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 5.4e-33 145.2 184 47.3
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 5.4e-33 145.2 176 48.9
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 9.2e-33 144.4 189 45.5
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 9.2e-33 144.4 184 47.8
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 1.2e-32 144.1 200 44.0
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.6e-32 143.7 189 46.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 1.6e-32 143.7 189 46.0
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 2.0e-32 143.3 190 44.2
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 2.0e-32 143.3 205 43.9
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 2.0e-32 143.3 197 44.2
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 2.7e-32 142.9 205 43.4
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 3.5e-32 142.5 189 46.6
Cfa014112 Carpinus fangiana HOM05D006240 ORTHO05D007709 6.0e-32 141.7 161 51.6
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 6.0e-32 141.7 190 48.4
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.0e-31 141.0 192 46.9
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.0e-31 141.0 191 46.6
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 1.3e-31 140.6 189 46.6
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 1.7e-31 140.2 195 45.1
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.7e-31 140.2 192 47.4
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 1.7e-31 140.2 221 43.0
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 2.3e-31 139.8 192 46.9
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 5.0e-31 138.7 183 49.2
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 8.6e-31 137.9 187 48.1
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.9e-30 136.7 180 45.0
Sc15g0004230 Simmondsia chinensis HOM05D006240 ORTHO05D007709 1.9e-30 136.7 159 52.2
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 5.6e-30 135.2 176 50.0
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 5.6e-30 135.2 193 42.5
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 1.6e-29 133.7 178 44.9
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 2.8e-29 132.9 197 43.1
SGA_v2.0_scaffold54G19644 Striga asiatica HOM05D006240 ORTHO05D007709 2.8e-29 132.9 302 36.1
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 4.7e-29 132.1 188 44.1
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 2.3e-28 129.8 181 47.0
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 3.1e-28 129.4 187 42.2
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 4.0e-28 129.0 205 42.9
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 1.2e-27 127.5 187 42.8
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 3.4e-27 125.9 189 41.8
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 3.4e-27 125.9 183 44.3
Eucgr.K03289 Eucalyptus grandis HOM05D006240 ORTHO05D007709 4.9e-26 122.1 243 36.6
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 2.7e-24 116.3 235 36.2
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 3.0e-23 112.8 160 45.6
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 5.2e-20 102.1 186 40.3
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 3.4e-19 99.4 112 50.0
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 1.1e-17 94.4 156 40.4
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 7.1e-17 91.7 155 40.6
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 6.0e-16 88.6 87 55.2
SGA_v2.0_scaffold54G19641 Striga asiatica HOM05D005561 ORTHO05D006834 9.5e-14 81.3 118 48.3
Atru.chr3.2559 Acer truncatum HOM05D006240 ORTHO05D007709 6.2e-13 78.6 178 33.1
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 5.2e-12 75.5 110 43.6
SEGI_19917 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 6.8e-12 75.1 172 31.4
Atru.chr9.2243 Acer truncatum HOM05D006240 ORTHO05D007709 1.5e-11 73.9 71 52.1
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 4.4e-11 72.4 204 29.4
Mapoly0189s0009 Marchantia polymorpha HOM05D006240 ORTHO05D007709 1.4e-09 67.4 232 28.0
SEGI_13318 Sequoiadendron giganteum HOM05D006240 ORTHO05D007709 3.0e-07 59.7 58 46.6
Atru.chr9.2228 Acer truncatum HOM05D000343 ORTHO05D000975 3.3e-06 56.2 39 69.2


User provided reference genes

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