Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Migut.M00566 Erythranthe guttata HOM05D000445 ORTHO05D000314 7.3e-46 186.8 91 100.0
Nitab4.5_0004864g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 6.7e-31 137.1 74 85.1
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.1e-29 132.1 82 79.3
Gohir.A09G102032 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.7e-29 131.3 78 82.1
Gohir.D11G067240 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.7e-29 131.3 78 82.1
PGR111G0085 Punica granatum HOM05D000445 ORTHO05D000314 3.7e-29 131.3 78 82.1
PGR111G0100 Punica granatum HOM05D000445 ORTHO05D000314 3.7e-29 131.3 78 82.1
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 6.2e-29 130.6 78 80.8
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 6.2e-29 130.6 78 80.8
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 1.1e-28 129.8 78 80.8
Gohir.D05G318250 Gossypium hirsutum HOM05D000445 ORTHO05D000314 1.1e-28 129.8 78 82.1
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 1.1e-28 129.8 78 80.8
Sc25g0002080 Simmondsia chinensis HOM05D000445 ORTHO05D000314 1.1e-28 129.8 78 80.8
Nitab4.5_0023562g0030 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.4e-28 128.6 74 81.1
Gohir.A12G088950 Gossypium hirsutum HOM05D000445 ORTHO05D000314 3.1e-28 128.3 78 80.8
Gohir.D01G115001 Gossypium hirsutum HOM05D000445 ORTHO05D000314 4.0e-28 127.9 78 79.5
AL1G45010 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 5.3e-28 127.5 78 80.8
Peaxi162Scf00336g00013 Petunia axillaris HOM05D000445 ORTHO05D000314 5.3e-28 127.5 78 79.5
ATCG00860 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 6.9e-28 127.1 78 79.5
ATCG01280 Arabidopsis thaliana HOM05D000445 ORTHO05D000314 6.9e-28 127.1 78 79.5
CARHR282560 Cardamine hirsuta HOM05D000445 ORTHO05D000314 6.9e-28 127.1 78 79.5
LjContig00489g0008652 Lotus japonicus HOM05D000445 ORTHO05D000314 9.0e-28 126.7 78 79.5
Potri.005G154512 Populus trichocarpa HOM05D000445 ORTHO05D000314 9.0e-28 126.7 78 79.5
Potri.013G143400 Populus trichocarpa HOM05D000445 ORTHO05D000314 9.0e-28 126.7 78 79.5
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
BNapus_Darmor_BZH_scaffold_287p00300 Brassica napus HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
BolC2t10583H Brassica oleracea HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
BolSC29t60535H Brassica oleracea HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
BolSC49t61158H Brassica oleracea HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
BraSC143t45672Z Brassica rapa HOM05D000445 ORTHO05D000314 1.5e-27 125.9 78 79.5
Glyma.20G045200 Glycine max HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.6e-27 125.2 78 78.2
Lalb_Chr23g0274311 Lupinus albus HOM05D000445 ORTHO05D000314 5.8e-27 124.0 74 78.4
arahy.Tifrunner.gnm1.ann1.5R36BF Arachis hypogaea HOM05D000445 ORTHO05D000314 1.0e-26 123.2 78 78.2
arahy.Tifrunner.gnm1.ann1.GB87JX Arachis hypogaea HOM05D000445 ORTHO05D000314 1.0e-26 123.2 78 78.2
arahy.Tifrunner.gnm1.ann1.Z1U5RE Arachis hypogaea HOM05D000445 ORTHO05D000314 1.0e-26 123.2 78 78.2
Nitab4.5_0000349g0190 Nicotiana tabacum HOM05D000445 ORTHO05D000314 1.3e-26 122.9 78 76.9
AL4G23530 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 2.2e-26 122.1 78 76.9
Solyc10g012230.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 8.4e-26 120.2 78 75.6
Nn021s41513 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.4e-25 119.4 78 74.4
Nn145s44090 Nelumbo nucifera HOM05D000445 ORTHO05D000314 1.4e-25 119.4 78 74.4
PSO548G0004 Papaver somniferum HOM05D000445 ORTHO05D000314 1.4e-25 119.4 78 74.4
PSO548G0115 Papaver somniferum HOM05D000445 ORTHO05D000314 1.4e-25 119.4 78 74.4
FAN16G0873 Fragaria x ananassa HOM05D000445 ORTHO05D000314 1.9e-25 119.0 80 76.2
HanXRQChr00c0349g0573981 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0368g0574211 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0392g0574471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr00c0572g0575961 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr04g0127431 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr11g0327041 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-25 119.0 78 74.4
RcHm_v2.0_CPg0501801 Rosa chinensis HOM05D000445 ORTHO05D000314 1.9e-25 119.0 80 76.2
RcHm_v2.0_CPg0502611 Rosa chinensis HOM05D000445 ORTHO05D000314 1.9e-25 119.0 80 76.2
HanXRQChr00c0634g0576611 Helianthus annuus HOM05D000445 ORTHO05D000314 3.2e-25 118.2 78 75.6
Lalb_Chr13g0292961 Lupinus albus HOM05D000445 ORTHO05D000314 3.2e-25 118.2 78 74.4
HanXRQChr11g0336111 Helianthus annuus HOM05D000445 ORTHO05D000314 7.1e-25 117.1 78 73.1
HanXRQChr11g0336131 Helianthus annuus HOM05D000445 ORTHO05D000314 7.1e-25 117.1 78 73.1
LjContig00318g0022366 Lotus japonicus HOM05D000445 ORTHO05D000314 7.1e-25 117.1 78 75.6
LjContig00319g0003005 Lotus japonicus HOM05D000445 ORTHO05D000314 7.1e-25 117.1 78 75.6
LjContig00319g0026737 Lotus japonicus HOM05D000445 ORTHO05D000314 7.1e-25 117.1 78 75.6
Gohir.D11G213450 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.1e-24 115.5 75 77.3
Gohir.D09G052912 Gossypium hirsutum HOM05D000445 ORTHO05D000314 2.7e-24 115.2 73 78.1
BraSC59t46564Z Brassica rapa HOM05D000445 ORTHO05D000314 6.0e-24 114.0 79 74.7
Lalb_Chr01g0014991 Lupinus albus HOM05D000445 ORTHO05D000314 5.7e-22 107.5 74 71.6
BolSC45t60890H Brassica oleracea HOM05D000445 ORTHO05D000314 5.9e-19 97.4 78 65.4
BraSC103t45490Z Brassica rapa HOM05D000445 ORTHO05D000314 5.0e-18 94.4 62 72.6
BraSC58t46446Z Brassica rapa HOM05D000445 ORTHO05D000314 5.0e-18 94.4 62 72.6
HanXRQChr00c0448g0574781 Helianthus annuus HOM05D000445 ORTHO05D000314 2.7e-16 88.6 56 73.2
Migut.D01323 Erythranthe guttata HOM05D000445 ORTHO05D000314 3.6e-16 88.2 51 84.3
Medtr4g047930 Medicago truncatula HOM05D000445 ORTHO05D000314 4.6e-16 87.8 78 61.5
HanXRQChr00c0903g0577861 Helianthus annuus HOM05D000445 ORTHO05D000314 7.9e-16 87.0 78 60.3
HanXRQChr00c0126g0571801 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-15 85.9 56 71.4
HanXRQChr10g0317991 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-15 85.9 56 71.4
HanXRQChr11g0326551 Helianthus annuus HOM05D000445 ORTHO05D000314 1.8e-15 85.9 56 71.4
Lsat_1_v5_gn_9_86681 Lactuca sativa HOM05D000445 ORTHO05D000314 1.8e-15 85.9 60 66.7
HanXRQChr14g0437931 Helianthus annuus HOM05D000445 ORTHO05D000314 8.8e-15 83.6 51 76.5
HanXRQChr00c0925g0577911 Helianthus annuus HOM05D000445 ORTHO05D000314 1.9e-14 82.4 78 57.7
Medtr8g071910 Medicago truncatula HOM05D000445 ORTHO05D000314 9.7e-14 80.1 78 57.7
Hund27860 Selenicereus undatus HOM05D000445 ORTHO05D000314 1.7e-13 79.3 70 60.0
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund29890 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
Hund29991 Selenicereus undatus HOM05D000445 ORTHO05D000314 2.2e-13 79.0 67 61.2
HanXRQChr00c0165g0572211 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-13 77.0 78 55.1
HanXRQChr10g0284451 Helianthus annuus HOM05D000445 ORTHO05D000314 8.2e-13 77.0 78 55.1
BolSC29t60489H Brassica oleracea HOM05D000445 ORTHO05D000314 1.8e-12 75.9 51 72.5
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 2.4e-12 75.5 41 80.5
SGA_v2.0_scaffold2596G54158 Striga asiatica HOM05D000445 ORTHO05D000314 1.3e-10 69.7 61 60.7
Migut.D01405 Erythranthe guttata HOM05D000445 ORTHO05D000314 1.7e-10 69.3 38 86.8
Sed0003894 Sechium edule HOM05D000445 ORTHO05D000314 1.7e-10 69.3 49 71.4
BolSC35t60677H Brassica oleracea HOM05D000445 ORTHO05D000314 7.2e-09 63.9 78 48.7
BolSC35t60723H Brassica oleracea HOM05D000445 ORTHO05D000314 7.2e-09 63.9 78 48.7
BolSC47t61074H Brassica oleracea HOM05D000445 ORTHO05D000314 7.2e-09 63.9 78 48.7
BraSC138t45547Z Brassica rapa HOM05D000445 ORTHO05D000314 7.2e-09 63.9 78 48.7
HanXRQChr00c0585g0576261 Helianthus annuus HOM05D000445 ORTHO05D000314 7.9e-08 60.5 78 46.2
HanXRQChr05g0152511 Helianthus annuus HOM05D000445 ORTHO05D000314 7.9e-08 60.5 78 46.2
Solyc06g048990.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 7.9e-08 60.5 47 63.8
arahy.Tifrunner.gnm1.ann1.VSF4TK Arachis hypogaea HOM05D000445 ORTHO05D000314 3.9e-07 58.2 42 69.0
BraSC58t46471Z Brassica rapa HOM05D000445 ORTHO05D000314 6.7e-07 57.4 43 69.8
RcHm_v2.0_Chr2g0118471 Rosa chinensis HOM05D000445 ORTHO05D000314 1.1e-06 56.6 40 72.5
EL10Ac1g00387 Beta vulgaris HOM05D000580 ORTHO05D001362 5.7e-06 54.3 34 76.5


User provided reference genes

Program Settings